RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 AAMDCQ9H7C9 122 aa8.65□□□□□ -1.02
CLSTN3-207ENST00000537408 LINC01619G3V211 115 aa8.65□□□□□ -1.02
CLSTN3-207ENST00000537408 TGFAP01135 160 aa8.65□□□□□ -1.02
CLSTN3-207ENST00000537408 LRRC75A-AS1Q8N1F1 130 aa8.65□□□□□ -1.02
CLSTN3-207ENST00000537408 C1orf162Q8NEQ5 155 aaPredicted RBP8.65□□□□□ -1.02
CLSTN3-207ENST00000537408 PIMREGQ9BSJ6 248 aa8.65□□□□□ -1.02
CLSTN3-207ENST00000537408 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.65□□□□□ -1.03
CLSTN3-207ENST00000537408 TCRAP04437 139 aa8.65□□□□□ -1.03
CLSTN3-207ENST00000537408 LINC00322Q6ZN03 302 aaPredicted RBP8.65□□□□□ -1.03
CLSTN3-207ENST00000537408 MYOZ3Q8TDC0 251 aa8.65□□□□□ -1.03
CLSTN3-207ENST00000537408 ITLN2Q8WWU7 325 aaPredicted RBP8.65□□□□□ -1.03
CLSTN3-207ENST00000537408 FXYD5Q96DB9 178 aa8.65□□□□□ -1.03
CLSTN3-207ENST00000537408 AJUBAQ96IF1 538 aa8.65□□□□□ -1.03
CLSTN3-207ENST00000537408 TRAV2A0A0B4J234 112 aa8.64□□□□□ -1.03
CLSTN3-207ENST00000537408 C9orf153Q5TBE3 101 aa8.64□□□□□ -1.03
CLSTN3-207ENST00000537408 FAM104BQ5XKR9 115 aa8.64□□□□□ -1.03
CLSTN3-207ENST00000537408 OR1L8Q8NGR8 309 aa8.64□□□□□ -1.03
CLSTN3-207ENST00000537408 RNF138Q8WVD3 245 aa8.64□□□□□ -1.03
CLSTN3-207ENST00000537408 SCGB1D4Q6XE38 83 aa8.64□□□□□ -1.03
CLSTN3-207ENST00000537408 Q86TA4 180 aa8.64□□□□□ -1.03
CLSTN3-207ENST00000537408 OR11H6Q8NGC7 330 aa8.64□□□□□ -1.03
CLSTN3-207ENST00000537408 MDFICQ9P1T7 246 aa8.64□□□□□ -1.03
CLSTN3-207ENST00000537408 SPANXDQ9BXN6 97 aa8.64□□□□□ -1.03
CLSTN3-207ENST00000537408 NCKAP5O14513 1909 aa8.64□□□□□ -1.03
CLSTN3-207ENST00000537408 CD69Q07108 199 aa8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 LINC00305Q7Z4B0 112 aa8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 FLNBO75369 2602 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 CCDC168Q8NDH2 2452 aa8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 C2orf83Q53S99 150 aa8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 MORN3Q6PF18 240 aaPredicted RBP8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 ZMAT4Q9H898 229 aa8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 B9A039 149 aa8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 HHLA3Q9XRX5 114 aa8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 TRBV7-3A0A075B6L6 115 aa8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 SLC25A20O43772 301 aa8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 DSCR9P59020 149 aa8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 NXT2Q9NPJ8 142 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-207ENST00000537408 USP34Q70CQ2 3546 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 TMEM213A2RRL7 107 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 PLAUP00749 431 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 PLNP26678 52 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 B3GALT5-AS1P59052 145 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 MORN5Q5VZ52 161 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 ZNF493Q6ZR52 646 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 Q9H3A6 140 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 TMEM14BQ9NUH8 114 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 ONECUT1Q9UBC0 465 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 TRAV40A0A0B4J280 105 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 WI2-2373I1.2A0A1W2PRP0 233 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 C9JAW5 83 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 NDUFB3O43676 98 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 IGHV1-2P23083 117 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 MRPL23Q16540 153 aaKnown RBP8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 HIGD1AQ9Y241 93 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 U3KQK5 164 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 LINC00694P0DN24 101 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 ORM2P19652 201 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 PRCDQ00LT1 54 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 AMN1Q8IY45 258 aa8.62□□□□□ -1.03
CLSTN3-207ENST00000537408 CCL8P80075 99 aa8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 FAM53AQ6NSI3 398 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 ZNF826PQ6ZT77 177 aa8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 TMEM190Q8WZ59 177 aa8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 SIGLEC9Q9Y336 463 aa8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 IGKV1OR2-108A0A075B7D4 117 aa8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 C3orf56Q8N813 242 aa8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 KLF14Q8TD94 323 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 PROK2Q9HC23 129 aa8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 IGKV3D-15A0A087WSY6 115 aa8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 MYCNOSP40205 109 aa8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 FOXG1P55316 489 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 MRPL51Q4U2R6 128 aaKnown RBP8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 RASL10AQ92737 203 aa8.61□□□□□ -1.03
CLSTN3-207ENST00000537408 NPFFO15130 113 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 CD40P25942 277 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 TMEM155Q4W5P6 130 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 OTORQ9NRC9 128 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 CALYQ9NYX4 217 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 TCL1BO95988 128 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 CECR9P0C854 216 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 BSPH1Q075Z2 132 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 RPL39P5Q59GN2 51 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 ZFP2Q6ZN57 461 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 GOLT1AQ6ZVE7 132 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 MAPKAPK5-AS1Q8N8E1 139 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 TRGV9Q99603 122 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 TNRC6BQ9UPQ9 1833 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 ABCA1O95477 2261 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 ANKHD1Q8IWZ3 2542 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 RNF7Q9UBF6 113 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 DUSP14O95147 198 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 UBE2D3P61077 147 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 UBE2D2P62837 147 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 SBSPONQ8IVN8 264 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 PRADC1Q9BSG0 188 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 C21orf62Q9NYP8 219 aa8.6□□□□□ -1.03
CLSTN3-207ENST00000537408 USF3Q68DE3 2245 aa8.59□□□□□ -1.03
CLSTN3-207ENST00000537408 IGHV3OR15-7A0A075B7D8 119 aa8.59□□□□□ -1.03
CLSTN3-207ENST00000537408 NDUFA3O95167 84 aa8.59□□□□□ -1.03
CLSTN3-207ENST00000537408 RPL7P18124 248 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms