RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 PAX2Q02962 417 aa12.52□□□□□ -0.4
MCF2L-232ENST00000535094 SMG1Q96Q15 3661 aaKnown RBP12.52□□□□□ -0.4
MCF2L-232ENST00000535094 A0A1B0GW15 77 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 H3BRM9 83 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 IGLV2-11P01706 119 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 CRYGCP07315 174 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 PRR30Q53SZ7 412 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-232ENST00000535094 AMTNQ6UX39 209 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 SCGB1D4Q6XE38 83 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 TRAV40A0A0B4J280 105 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 TEX22C9J3V5 150 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 CEACAM3P40198 252 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 Q5PR19 223 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 PVRIGQ6DKI7 326 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 OR9G4Q8NGQ1 327 aa12.52□□□□□ -0.41
MCF2L-232ENST00000535094 I3L2K1 104 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 M0R381 172 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 MGPP08493 103 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 FOXC1Q12948 553 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 K7EIM0 57 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 TGFAP01135 160 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 CHD8Q9HCK8 2581 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 LOC107984156A0A0G2JMH3 177 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 K7EP34 96 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 FXYD2P54710 66 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 ARL17AQ8IVW1 177 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 NUP37Q8NFH4 326 aa12.51□□□□□ -0.41
MCF2L-232ENST00000535094 J3QR89 54 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 ZNF502Q8TBZ5 544 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 ARPC1AQ92747 370 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 GAS8-AS1O95177 125 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 IGKCP01834 107 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 PRR25Q96S07 402 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 CHAC1Q9BUX1 264 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 A0A1W2PPM0 123 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 FABP5P3A8MUU1 101 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 H3BRN7 92 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 SAMD13Q5VXD3 122 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 LINC00311Q8N616 119 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 RAB1BQ9H0U4 201 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 LINC00574Q9H8X3 128 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 LINC00527Q9UJ94 153 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 AGRNO00468 2067 aa12.5□□□□□ -0.41
MCF2L-232ENST00000535094 SRSF9Q13242 221 aaKnown RBP eCLIP12.49□□□□□ -0.41
MCF2L-232ENST00000535094 LGALS9BQ3B8N2 356 aa12.49□□□□□ -0.41
MCF2L-232ENST00000535094 LGALS9CQ6DKI2 356 aa12.49□□□□□ -0.41
MCF2L-232ENST00000535094 CACNA1AO00555 2505 aa12.49□□□□□ -0.41
MCF2L-232ENST00000535094 TMEM8BA6NDV4 472 aa12.49□□□□□ -0.41
MCF2L-232ENST00000535094 TNFRSF6BO95407 300 aa12.49□□□□□ -0.41
MCF2L-232ENST00000535094 APOBEC3AP31941 199 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-232ENST00000535094 TMEM238C9JI98 176 aa12.49□□□□□ -0.41
MCF2L-232ENST00000535094 PPBPP02775 128 aa12.49□□□□□ -0.41
MCF2L-232ENST00000535094 TMEM78Q5T7P6 136 aa12.49□□□□□ -0.41
MCF2L-232ENST00000535094 TMEM14CQ9P0S9 112 aa12.49□□□□□ -0.41
MCF2L-232ENST00000535094 TEX48A0A1B0GUV7 120 aa12.48□□□□□ -0.41
MCF2L-232ENST00000535094 THBDP07204 575 aa12.48□□□□□ -0.41
MCF2L-232ENST00000535094 Q6ZS92 163 aa12.48□□□□□ -0.41
MCF2L-232ENST00000535094 ETDBQ3ZM63 59 aa12.48□□□□□ -0.41
MCF2L-232ENST00000535094 ADAMTSL5Q6ZMM2 481 aa12.48□□□□□ -0.41
MCF2L-232ENST00000535094 ZNF80P51504 273 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-232ENST00000535094 EFNA4P52798 201 aa12.48□□□□□ -0.41
MCF2L-232ENST00000535094 CLEC19AQ6UXS0 136 aa12.48□□□□□ -0.41
MCF2L-232ENST00000535094 DPM2O94777 84 aa12.47□□□□□ -0.41
MCF2L-232ENST00000535094 INS-IGF2F8WCM5 200 aa12.47□□□□□ -0.41
MCF2L-232ENST00000535094 NDPQ00604 133 aa12.47□□□□□ -0.41
MCF2L-232ENST00000535094 IGFL2Q6UWQ7 119 aa12.47□□□□□ -0.41
MCF2L-232ENST00000535094 ZNF479Q96JC4 524 aa12.47□□□□□ -0.41
MCF2L-232ENST00000535094 FAM208BQ5VWN6 2430 aa12.47□□□□□ -0.41
MCF2L-232ENST00000535094 IGHV3OR16-10A0A075B7F0 116 aa12.47□□□□□ -0.41
MCF2L-232ENST00000535094 IGKV2D-26A0A0A0MRZ7 120 aa12.47□□□□□ -0.41
MCF2L-232ENST00000535094 NPIPB6E9PJ23 425 aa12.47□□□□□ -0.41
MCF2L-232ENST00000535094 SMIM17P0DL12 118 aa12.47□□□□□ -0.41
MCF2L-232ENST00000535094 RPS20P60866 119 aaKnown RBP12.47□□□□□ -0.41
MCF2L-232ENST00000535094 IL17RELQ6ZVW7 336 aa12.47□□□□□ -0.41
MCF2L-232ENST00000535094 BOD1L2Q8IYS8 172 aa12.46□□□□□ -0.41
MCF2L-232ENST00000535094 CYSLTR1Q9Y271 337 aa12.46□□□□□ -0.41
MCF2L-232ENST00000535094 SPTBN4Q9H254 2564 aa12.46□□□□□ -0.41
MCF2L-232ENST00000535094 H3BMG7 143 aa12.46□□□□□ -0.41
MCF2L-232ENST00000535094 OR5A1Q8NGJ0 315 aa12.46□□□□□ -0.41
MCF2L-232ENST00000535094 MRPL35Q9NZE8 188 aaKnown RBP12.46□□□□□ -0.41
MCF2L-232ENST00000535094 A0A1B0GWB2 263 aa12.46□□□□□ -0.42
MCF2L-232ENST00000535094 H3BVH4 76 aa12.46□□□□□ -0.42
MCF2L-232ENST00000535094 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.42
MCF2L-232ENST00000535094 SH2D6Q7Z4S9 175 aa12.46□□□□□ -0.42
MCF2L-232ENST00000535094 TTC9CQ8N5M4 171 aa12.46□□□□□ -0.42
MCF2L-232ENST00000535094 GLMPQ8WWB7 406 aa12.46□□□□□ -0.42
MCF2L-232ENST00000535094 LRBAP50851 2863 aa12.45□□□□□ -0.42
MCF2L-232ENST00000535094 EMP1P54849 157 aa12.45□□□□□ -0.42
MCF2L-232ENST00000535094 C5orf64Q2M2E5 130 aa12.45□□□□□ -0.42
MCF2L-232ENST00000535094 B9A039 149 aa12.45□□□□□ -0.42
MCF2L-232ENST00000535094 ZNF418Q8TF45 676 aaPredicted RBP12.45□□□□□ -0.42
MCF2L-232ENST00000535094 PTPN13Q12923 2485 aa12.45□□□□□ -0.42
MCF2L-232ENST00000535094 PRAC2D3DTV9 90 aa12.45□□□□□ -0.42
MCF2L-232ENST00000535094 F5H697 171 aa12.45□□□□□ -0.42
MCF2L-232ENST00000535094 APOMO95445 188 aa12.45□□□□□ -0.42
MCF2L-232ENST00000535094 LYPD1Q8N2G4 141 aa12.45□□□□□ -0.42
MCF2L-232ENST00000535094 VKORC1Q9BQB6 163 aa12.45□□□□□ -0.42
MCF2L-232ENST00000535094 C15orf32Q32M92 178 aa12.44□□□□□ -0.42
MCF2L-232ENST00000535094 C16orf92Q96LL3 132 aa12.44□□□□□ -0.42
MCF2L-232ENST00000535094 ACACBO00763 2458 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms