RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 GPN1Q9HCN4 374 aaPredicted RBP7□□□□□ -1.29
CLSTN3-203ENST00000534830 OR5AC2Q9NZP5 309 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 LINC00588Q9Y4M8 146 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 TRAV12-3A0A0B4J271 114 aa6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 E5RGE8 158 aa6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 NUDT3O95989 172 aa6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 SLC25A5P05141 298 aaKnown RBP6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 C9orf47Q6ZRZ4 202 aa6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 CCDC28AQ8IWP9 274 aa6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 C11orf72Q8NBR9 251 aa6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 OR5C1Q8NGR4 320 aa6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 ZNF503Q96F45 646 aa6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 C18orf15Q96N68 181 aa6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 SLC25A31Q9H0C2 315 aa6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 AGPAT4-IT1Q9H0P7 198 aa6.99□□□□□ -1.29
CLSTN3-203ENST00000534830 FLG2Q5D862 2391 aaPredicted RBP6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 NBDYA0A0U1RRE5 68 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 H3BNG1 76 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 PRAF2O60831 178 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 RLN2P04090 185 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 NMBP08949 121 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 CRISP2P16562 243 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 HOXA5P20719 270 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 H2BFSP57053 126 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 CYCSP99999 105 aaKnown RBP6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 ANXA2RQ3ZCQ2 193 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 EXOC3-AS1Q8N2X6 119 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 C6orf223Q8N319 242 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 THAP6Q8TBB0 222 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 ENKURQ8TC29 256 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 RXFP4Q8TDU9 374 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 ATG101Q9BSB4 218 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 MARVELD1Q9BSK0 173 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 WDR61Q9GZS3 305 aaKnown RBP6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 TIMM9Q9Y5J7 89 aa6.98□□□□□ -1.29
CLSTN3-203ENST00000534830 GAGE12BA1L429 117 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 C7orf71A4D174 169 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 SNURFLB1AK76 121 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 INMT-MINDY4F8WBC2 141 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 J3KRW8 73 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 GAGE7O76087 117 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 NBEAP1P0C6P0 100 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 GAGE12FP0CL80 117 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 GAGE12GP0CL81 117 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 GAGE12IP0CL82 117 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 M6PRP20645 277 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 CCL18P55774 89 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 CD300CQ08708 224 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 MIR17HGQ75NE6 70 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 SSX7Q7RTT5 188 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 ZFAND2AQ8N6M9 145 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 BLNKQ8WV28 456 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 FXYD5Q96DB9 178 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 UPK3BQ9BT76 320 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 OR51M1Q9H341 326 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 SRRM2Q9UQ35 2752 aaKnown RBP6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 MYCBP2O75592 4640 aa6.97□□□□□ -1.29
CLSTN3-203ENST00000534830 TRAV26-1A0A087WT03 109 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 SPINK4O60575 86 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 BTN1A1Q13410 526 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 OR5I1Q13606 314 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 CLINT1Q14677 625 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 ICAM4Q14773 271 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 ESRGQ1W209 222 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 PRR9Q5T870 116 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 Q6ZTI0 123 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 EIF4E3Q8N5X7 224 aaKnown RBP6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 PPP1R1CQ8WVI7 109 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 GNPNAT1Q96EK6 184 aaPredicted RBP6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 VGLL1Q99990 258 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 MRPL32Q9BYC8 188 aaKnown RBP6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 Q9H8V8 135 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 PTTG2Q9NZH5 202 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 ZNF492Q9P255 531 aa6.96□□□□□ -1.3
CLSTN3-203ENST00000534830 IGKV2-40A0A087WW87 121 aaPredicted RBP6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 TRBV7-9A0A0J9YWB2 115 aa6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 IGKV2D-40P01614 121 aaPredicted RBP6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 TCL1AP56279 114 aa6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 LRRC37A5PQ49AS3 106 aa6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 IBA57Q5T440 356 aaKnown RBP6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 Q6ZQT7 251 aa6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 ZNF680Q8NEM1 530 aa6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 VSIG2Q96IQ7 327 aa6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 PAXXQ9BUH6 204 aa6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 TMPRSS5Q9H3S3 457 aa6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 AAMDCQ9H7C9 122 aa6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 GSN-AS1Q9NRJ2 163 aa6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 FUT9Q9Y231 359 aa6.95□□□□□ -1.3
CLSTN3-203ENST00000534830 A0A0J9YY99 117 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 RBAKDNA6NC62 111 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 MPC2O95563 127 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 GPX1P07203 203 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 OR10J4P0C629 311 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 RNASE4P34096 147 aaKnown RBP6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 Q5VSD8 79 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 FAM122CQ6P4D5 195 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 LYPD1Q8N2G4 141 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 PHYHIPLQ96FC7 376 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 ATP5SQ99766 215 aa6.94□□□□□ -1.3
CLSTN3-203ENST00000534830 KRTAP1-5Q9BYS1 174 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms