RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 RPP25LQ8N5L8 163 aaKnown RBP11□□□□□ -0.65
CPSF1-210ENST00000532935 PAXXQ9BUH6 204 aa11□□□□□ -0.65
CPSF1-210ENST00000532935 DKK2Q9UBU2 259 aa11□□□□□ -0.65
CPSF1-210ENST00000532935 PRELID1Q9Y255 219 aa11□□□□□ -0.65
CPSF1-210ENST00000532935 ZNF705GA8MUZ8 300 aaPredicted RBP10.99□□□□□ -0.65
CPSF1-210ENST00000532935 IGLL5B9A064 214 aa10.99□□□□□ -0.65
CPSF1-210ENST00000532935 M0R3E3 92 aa10.99□□□□□ -0.65
CPSF1-210ENST00000532935 PRM2P04554 102 aa10.99□□□□□ -0.65
CPSF1-210ENST00000532935 OR10J4P0C629 311 aa10.99□□□□□ -0.65
CPSF1-210ENST00000532935 NBEAP1P0C6P0 100 aa10.99□□□□□ -0.65
CPSF1-210ENST00000532935 ATP6V0CP27449 155 aa10.99□□□□□ -0.65
CPSF1-210ENST00000532935 FAM222AQ5U5X8 452 aa10.99□□□□□ -0.65
CPSF1-210ENST00000532935 TMEM256Q8N2U0 113 aa10.99□□□□□ -0.65
CPSF1-210ENST00000532935 EXOC3-AS1Q8N2X6 119 aa10.99□□□□□ -0.65
CPSF1-210ENST00000532935 EIF4E3Q8N5X7 224 aaKnown RBP10.99□□□□□ -0.65
CPSF1-210ENST00000532935 FXYD5Q96DB9 178 aa10.99□□□□□ -0.65
CPSF1-210ENST00000532935 YTHDF2Q9Y5A9 579 aaKnown RBP10.99□□□□□ -0.65
CPSF1-210ENST00000532935 DEFB131BA0A096LNP1 70 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 TEX48A0A1B0GUV7 120 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 NPIPB6E9PJ23 425 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 OR7C2O60412 319 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 CT45A10P0DMU9 189 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 TSPOP30536 169 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 TCTAP57738 103 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 FAM74A1Q5RGS3 127 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 HSD17B11Q8NBQ5 300 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 OR2G3Q8NGZ4 309 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 ODF3Q96PU9 254 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 LINC01587Q99440 93 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 AAMDCQ9H7C9 122 aa10.98□□□□□ -0.65
CPSF1-210ENST00000532935 DNAH6Q9C0G6 4158 aa10.97□□□□□ -0.65
CPSF1-210ENST00000532935 ICAM4Q14773 271 aa10.97□□□□□ -0.65
CPSF1-210ENST00000532935 KIR3DS1Q14943 382 aa10.97□□□□□ -0.65
CPSF1-210ENST00000532935 LYPD6BQ8NI32 183 aa10.97□□□□□ -0.65
CPSF1-210ENST00000532935 ZNF503Q96F45 646 aa10.97□□□□□ -0.65
CPSF1-210ENST00000532935 NIPSNAP3BQ9BS92 247 aa10.97□□□□□ -0.65
CPSF1-210ENST00000532935 RAB19A4D1S5 217 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 MBP02144 154 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 M6PRP20645 277 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 LEPP41159 167 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 TAS2R45P59539 299 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 TAS2R60P59551 318 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 UBE2L3P68036 154 aaKnown RBP10.96□□□□□ -0.65
CPSF1-210ENST00000532935 ERCC8Q13216 396 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 ACOT6Q3I5F7 207 aaPredicted RBP10.96□□□□□ -0.65
CPSF1-210ENST00000532935 KHDC3LQ587J8 217 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 GFI1BQ5VTD9 330 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 FAM122CQ6P4D5 195 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 COMMD7Q86VX2 200 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 C20orf144Q9BQM9 153 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 APLNQ9ULZ1 77 aa10.96□□□□□ -0.65
CPSF1-210ENST00000532935 IGHV4-4A0A075B6R2 117 aa10.95□□□□□ -0.66
CPSF1-210ENST00000532935 AZU1P20160 251 aa10.95□□□□□ -0.66
CPSF1-210ENST00000532935 AKR1C8PQ5T2L2 129 aa10.95□□□□□ -0.66
CPSF1-210ENST00000532935 LGALS9CQ6DKI2 356 aa10.95□□□□□ -0.66
CPSF1-210ENST00000532935 UQCC3Q6UW78 93 aa10.95□□□□□ -0.66
CPSF1-210ENST00000532935 LINC00477Q96M19 166 aa10.95□□□□□ -0.66
CPSF1-210ENST00000532935 PLA2G2EQ9NZK7 142 aa10.95□□□□□ -0.66
CPSF1-210ENST00000532935 H7BYZ3 331 aa10.94□□□□□ -0.66
CPSF1-210ENST00000532935 J3KRW8 73 aa10.94□□□□□ -0.66
CPSF1-210ENST00000532935 EIF3GO75821 320 aaKnown RBP eCLIP10.94□□□□□ -0.66
CPSF1-210ENST00000532935 HTN1P15515 57 aa10.94□□□□□ -0.66
CPSF1-210ENST00000532935 RAB2AP61019 212 aa10.94□□□□□ -0.66
CPSF1-210ENST00000532935 AGPAT4-IT1Q9H0P7 198 aa10.94□□□□□ -0.66
CPSF1-210ENST00000532935 SH3BGRL3Q9H299 93 aa10.94□□□□□ -0.66
CPSF1-210ENST00000532935 IGKV2-40A0A087WW87 121 aaPredicted RBP10.93□□□□□ -0.66
CPSF1-210ENST00000532935 A0A1W2PPV4 95 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 PLAC8L1A1L4L8 177 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 LYRM9A8MSI8 78 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 TEX46H3BTG2 121 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 IGKV2D-40P01614 121 aaPredicted RBP10.93□□□□□ -0.66
CPSF1-210ENST00000532935 DAD1P61803 113 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 RANP62826 216 aaKnown RBP10.93□□□□□ -0.66
CPSF1-210ENST00000532935 C9orf47Q6ZRZ4 202 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 LYPD1Q8N2G4 141 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 OR10G4Q8NGN3 311 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 OR10G9Q8NGN4 311 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 OR10G7Q8NGN6 311 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 C16orf74Q96GX8 76 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 FAM19A4Q96LR4 140 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 Q9H3A6 140 aa10.93□□□□□ -0.66
CPSF1-210ENST00000532935 EPPK1P58107 5090 aaKnown RBP10.92□□□□□ -0.66
CPSF1-210ENST00000532935 TRAV1-1A0A0B4J248 108 aa10.92□□□□□ -0.66
CPSF1-210ENST00000532935 TRAV12-3A0A0B4J271 114 aa10.92□□□□□ -0.66
CPSF1-210ENST00000532935 PQLC2Q6ZP29 291 aa10.92□□□□□ -0.66
CPSF1-210ENST00000532935 PCNPQ8WW12 178 aaKnown RBP10.92□□□□□ -0.66
CPSF1-210ENST00000532935 VGLL1Q99990 258 aa10.92□□□□□ -0.66
CPSF1-210ENST00000532935 C7orf71A4D174 169 aa10.91□□□□□ -0.66
CPSF1-210ENST00000532935 KLLNB2CW77 178 aa10.91□□□□□ -0.66
CPSF1-210ENST00000532935 SLC25A5P05141 298 aaKnown RBP10.91□□□□□ -0.66
CPSF1-210ENST00000532935 CSN1S1P47710 185 aa10.91□□□□□ -0.66
CPSF1-210ENST00000532935 TMEM78Q5T7P6 136 aa10.91□□□□□ -0.66
CPSF1-210ENST00000532935 ZNF493Q6ZR52 646 aa10.91□□□□□ -0.66
CPSF1-210ENST00000532935 RNASE8Q8TDE3 154 aaKnown RBP10.91□□□□□ -0.66
CPSF1-210ENST00000532935 TMEM263Q8WUH6 116 aaKnown RBP10.91□□□□□ -0.66
CPSF1-210ENST00000532935 SMDT1Q9H4I9 107 aa10.91□□□□□ -0.66
CPSF1-210ENST00000532935 KRBOX1C9JBD0 128 aa10.9□□□□□ -0.66
CPSF1-210ENST00000532935 HMGB3O15347 200 aaKnown RBP10.9□□□□□ -0.66
CPSF1-210ENST00000532935 HTN3P15516 51 aa10.9□□□□□ -0.66
CPSF1-210ENST00000532935 CRISP2P16562 243 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms