RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 PRR25Q96S07 402 aa13.99□□□□□ -0.17
UBXN1-213ENST00000532904 HILPDAQ9Y5L2 63 aa13.99□□□□□ -0.17
UBXN1-213ENST00000532904 LMO4P61968 165 aa13.98□□□□□ -0.17
UBXN1-213ENST00000532904 EGR2P11161 476 aaPredicted RBP13.97□□□□□ -0.17
UBXN1-213ENST00000532904 CACNG7P62955 275 aa13.97□□□□□ -0.17
UBXN1-213ENST00000532904 NPFFR1Q9GZQ6 430 aa13.97□□□□□ -0.17
UBXN1-213ENST00000532904 RABAC1Q9UI14 185 aa13.97□□□□□ -0.17
UBXN1-213ENST00000532904 IGSF10Q6WRI0 2623 aa13.97□□□□□ -0.17
UBXN1-213ENST00000532904 RPL7P18124 248 aaKnown RBP13.97□□□□□ -0.17
UBXN1-213ENST00000532904 BPESC1Q9GZL8 116 aa13.97□□□□□ -0.17
UBXN1-213ENST00000532904 IGLC6P0CF74 106 aa13.96□□□□□ -0.17
UBXN1-213ENST00000532904 TTC9CQ8N5M4 171 aa13.96□□□□□ -0.17
UBXN1-213ENST00000532904 FER1L6-AS1Q8NA97 138 aa13.96□□□□□ -0.17
UBXN1-213ENST00000532904 OR9G4Q8NGQ1 327 aa13.96□□□□□ -0.17
UBXN1-213ENST00000532904 IFI27L1Q96BM0 104 aa13.96□□□□□ -0.17
UBXN1-213ENST00000532904 C21orf62Q9NYP8 219 aa13.96□□□□□ -0.17
UBXN1-213ENST00000532904 SMAD7O15105 426 aaKnown RBP13.95□□□□□ -0.18
UBXN1-213ENST00000532904 SIVA1O15304 175 aa13.95□□□□□ -0.18
UBXN1-213ENST00000532904 NPYP01303 97 aa13.95□□□□□ -0.18
UBXN1-213ENST00000532904 CKS2P33552 79 aa13.95□□□□□ -0.18
UBXN1-213ENST00000532904 BMI1P35226 326 aa13.95□□□□□ -0.18
UBXN1-213ENST00000532904 SRSF2Q01130 221 aaKnown RBP13.95□□□□□ -0.18
UBXN1-213ENST00000532904 ZNF562Q6V9R5 426 aa13.95□□□□□ -0.18
UBXN1-213ENST00000532904 SPOCK3Q9BQ16 436 aa13.95□□□□□ -0.18
UBXN1-213ENST00000532904 H3BRM9 83 aa13.95□□□□□ -0.18
UBXN1-213ENST00000532904 IGHV4-39P01824 125 aa13.95□□□□□ -0.18
UBXN1-213ENST00000532904 EBI3Q14213 229 aa13.95□□□□□ -0.18
UBXN1-213ENST00000532904 TWIST1Q15672 202 aa13.95□□□□□ -0.18
UBXN1-213ENST00000532904 ARPC1AQ92747 370 aa13.95□□□□□ -0.18
UBXN1-213ENST00000532904 CFAP46Q8IYW2 2715 aa13.94□□□□□ -0.18
UBXN1-213ENST00000532904 GAGE12BA1L429 117 aa13.94□□□□□ -0.18
UBXN1-213ENST00000532904 A6NDN8 102 aa13.94□□□□□ -0.18
UBXN1-213ENST00000532904 ZNF80P51504 273 aaPredicted RBP13.94□□□□□ -0.18
UBXN1-213ENST00000532904 FXYD7P58549 80 aa13.94□□□□□ -0.18
UBXN1-213ENST00000532904 SMKR1H3BMG3 65 aa13.94□□□□□ -0.18
UBXN1-213ENST00000532904 UBE2E1P51965 193 aa13.94□□□□□ -0.18
UBXN1-213ENST00000532904 HSD52Q0P140 79 aa13.94□□□□□ -0.18
UBXN1-213ENST00000532904 HES1Q14469 280 aa13.94□□□□□ -0.18
UBXN1-213ENST00000532904 ZNF575Q86XF7 245 aa13.94□□□□□ -0.18
UBXN1-213ENST00000532904 SMAD5-AS1Q9Y6J3 95 aa13.94□□□□□ -0.18
UBXN1-213ENST00000532904 DOPEY1Q5JWR5 2465 aa13.93□□□□□ -0.18
UBXN1-213ENST00000532904 A1L4Q6 167 aa13.93□□□□□ -0.18
UBXN1-213ENST00000532904 C9orf118A6NHY6 69 aa13.93□□□□□ -0.18
UBXN1-213ENST00000532904 IGHG4P01861 327 aa13.93□□□□□ -0.18
UBXN1-213ENST00000532904 NDPQ00604 133 aa13.93□□□□□ -0.18
UBXN1-213ENST00000532904 Q8TAT8 98 aa13.93□□□□□ -0.18
UBXN1-213ENST00000532904 PSMG3-AS1Q96PY0 264 aa13.93□□□□□ -0.18
UBXN1-213ENST00000532904 VGLL1Q99990 258 aa13.93□□□□□ -0.18
UBXN1-213ENST00000532904 A0A1W2PRD5 423 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 A0A1W2PRF3 423 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 A0A1W2PRM7 423 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 LINC01546A6NGU7 62 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 UFSP1Q6NVU6 142 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 Q8N6K4 173 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 OR4X2Q8NGF9 303 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 THYN1Q9P016 225 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 GAGE10A6NGK3 116 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 ADAMTSL5Q6ZMM2 481 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 RNF185Q96GF1 192 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 CCL19Q99731 98 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 CNFNQ9BYD5 112 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 CACNA1BQ00975 2339 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 WNK2Q9Y3S1 2297 aa13.92□□□□□ -0.18
UBXN1-213ENST00000532904 NDUFS8O00217 210 aa13.91□□□□□ -0.18
UBXN1-213ENST00000532904 IGHV3-23P01764 117 aa13.91□□□□□ -0.18
UBXN1-213ENST00000532904 CTSGP08311 255 aa13.91□□□□□ -0.18
UBXN1-213ENST00000532904 COTL1Q14019 142 aa13.91□□□□□ -0.18
UBXN1-213ENST00000532904 SCGB2A1O75556 95 aa13.91□□□□□ -0.18
UBXN1-213ENST00000532904 DYNAPQ8N1N2 210 aa13.91□□□□□ -0.18
UBXN1-213ENST00000532904 PIMREGQ9BSJ6 248 aa13.91□□□□□ -0.18
UBXN1-213ENST00000532904 MAP1LC3AQ9H492 121 aa13.91□□□□□ -0.18
UBXN1-213ENST00000532904 GTF2H5Q6ZYL4 71 aa13.9□□□□□ -0.18
UBXN1-213ENST00000532904 PIFOQ8TCI5 191 aa13.9□□□□□ -0.18
UBXN1-213ENST00000532904 AP1S3Q96PC3 154 aa13.9□□□□□ -0.18
UBXN1-213ENST00000532904 VPS25Q9BRG1 176 aa13.9□□□□□ -0.18
UBXN1-213ENST00000532904 USP24Q9UPU5 2620 aa13.9□□□□□ -0.18
UBXN1-213ENST00000532904 HLA-DMBP28068 263 aa13.89□□□□□ -0.19
UBXN1-213ENST00000532904 KIR3DS1Q14943 382 aa13.89□□□□□ -0.19
UBXN1-213ENST00000532904 IGFL4Q6B9Z1 124 aa13.89□□□□□ -0.19
UBXN1-213ENST00000532904 JMJD8Q96S16 334 aa13.89□□□□□ -0.19
UBXN1-213ENST00000532904 K7ERU9 68 aa13.89□□□□□ -0.19
UBXN1-213ENST00000532904 MSRB1Q9NZV6 116 aa13.89□□□□□ -0.19
UBXN1-213ENST00000532904 DKK2Q9UBU2 259 aa13.89□□□□□ -0.19
UBXN1-213ENST00000532904 AKAP6Q13023 2319 aa13.89□□□□□ -0.19
UBXN1-213ENST00000532904 NCBP2LA6PVI3 153 aaKnown RBP13.88□□□□□ -0.19
UBXN1-213ENST00000532904 FABP5P3A8MUU1 101 aa13.88□□□□□ -0.19
UBXN1-213ENST00000532904 S100A7P31151 101 aa13.88□□□□□ -0.19
UBXN1-213ENST00000532904 TCTAP57738 103 aa13.88□□□□□ -0.19
UBXN1-213ENST00000532904 PSMG4Q5JS54 123 aa13.88□□□□□ -0.19
UBXN1-213ENST00000532904 PRSS57Q6UWY2 283 aa13.88□□□□□ -0.19
UBXN1-213ENST00000532904 PCP2Q8IVA1 136 aa13.88□□□□□ -0.19
UBXN1-213ENST00000532904 C10orf105Q8TEF2 133 aa13.88□□□□□ -0.19
UBXN1-213ENST00000532904 AJUBAQ96IF1 538 aa13.88□□□□□ -0.19
UBXN1-213ENST00000532904 ORM1P02763 201 aa13.87□□□□□ -0.19
UBXN1-213ENST00000532904 H3BUT2 72 aa13.87□□□□□ -0.19
UBXN1-213ENST00000532904 K7EP34 96 aa13.87□□□□□ -0.19
UBXN1-213ENST00000532904 FCER1GP30273 86 aa13.87□□□□□ -0.19
UBXN1-213ENST00000532904 NMUP48645 174 aa13.87□□□□□ -0.19
UBXN1-213ENST00000532904 ZMAT4Q9H898 229 aa13.87□□□□□ -0.19
UBXN1-213ENST00000532904 NXT2Q9NPJ8 142 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms