RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 SPINK13Q1W4C9 94 aa11.12□□□□□ -0.63
CCS-206ENST00000530961 AGPAT4-IT1Q9H0P7 198 aa11.12□□□□□ -0.63
CCS-206ENST00000530961 GOLT1BQ9Y3E0 138 aa11.12□□□□□ -0.63
CCS-206ENST00000530961 DYNC2H1Q8NCM8 4307 aaKnown RBP11.12□□□□□ -0.63
CCS-206ENST00000530961 HERC2O95714 4834 aa11.11□□□□□ -0.63
CCS-206ENST00000530961 LCE6AA0A183 80 aa11.11□□□□□ -0.63
CCS-206ENST00000530961 M0R2Z0 102 aa11.11□□□□□ -0.63
CCS-206ENST00000530961 LEPP41159 167 aa11.11□□□□□ -0.63
CCS-206ENST00000530961 TMEM78Q5T7P6 136 aa11.11□□□□□ -0.63
CCS-206ENST00000530961 ZNF705AQ6ZN79 300 aaPredicted RBP11.11□□□□□ -0.63
CCS-206ENST00000530961 C5orf17Q8NAS9 161 aa11.11□□□□□ -0.63
CCS-206ENST00000530961 TMPRSS5Q9H3S3 457 aa11.11□□□□□ -0.63
CCS-206ENST00000530961 IGKV2-40A0A087WW87 121 aaPredicted RBP11.1□□□□□ -0.63
CCS-206ENST00000530961 TRBV7-9A0A0J9YWB2 115 aa11.1□□□□□ -0.63
CCS-206ENST00000530961 SERTM2A0A1B0GWG4 89 aa11.1□□□□□ -0.63
CCS-206ENST00000530961 TEX46H3BTG2 121 aa11.1□□□□□ -0.63
CCS-206ENST00000530961 CRXO43186 299 aaPredicted RBP11.1□□□□□ -0.63
CCS-206ENST00000530961 INSP01308 110 aa11.1□□□□□ -0.63
CCS-206ENST00000530961 IGKV2D-40P01614 121 aaPredicted RBP11.1□□□□□ -0.63
CCS-206ENST00000530961 NMBP08949 121 aa11.1□□□□□ -0.63
CCS-206ENST00000530961 SUMO1P63165 101 aaKnown RBP11.1□□□□□ -0.63
CCS-206ENST00000530961 ERCC8Q13216 396 aa11.1□□□□□ -0.63
CCS-206ENST00000530961 NEU1Q99519 415 aa11.1□□□□□ -0.63
CCS-206ENST00000530961 EDA2RQ9HAV5 297 aa11.1□□□□□ -0.63
CCS-206ENST00000530961 TRAV1-1A0A0B4J248 108 aa11.09□□□□□ -0.63
CCS-206ENST00000530961 SMIM9A6NGZ8 99 aa11.09□□□□□ -0.63
CCS-206ENST00000530961 MIFP14174 115 aa11.09□□□□□ -0.63
CCS-206ENST00000530961 PPT1P50897 306 aa11.09□□□□□ -0.63
CCS-206ENST00000530961 ZNF138P52744 262 aa11.09□□□□□ -0.63
CCS-206ENST00000530961 VGLL1Q99990 258 aa11.09□□□□□ -0.63
CCS-206ENST00000530961 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
CCS-206ENST00000530961 ZNF492Q9P255 531 aa11.09□□□□□ -0.63
CCS-206ENST00000530961 EPDR1Q9UM22 224 aa11.09□□□□□ -0.63
CCS-206ENST00000530961 ARL2-SNX15V9GYD0 113 aa11.09□□□□□ -0.63
CCS-206ENST00000530961 TRAV12-2A0A075B6T6 113 aa11.08□□□□□ -0.64
CCS-206ENST00000530961 GGTLC3B5MD39 225 aa11.08□□□□□ -0.64
CCS-206ENST00000530961 K7EQM0 130 aa11.08□□□□□ -0.64
CCS-206ENST00000530961 C1orf158Q8N1D5 194 aa11.08□□□□□ -0.64
CCS-206ENST00000530961 TMEM256Q8N2U0 113 aa11.08□□□□□ -0.64
CCS-206ENST00000530961 FAM19A4Q96LR4 140 aa11.08□□□□□ -0.64
CCS-206ENST00000530961 TMEM208Q9BTX3 173 aa11.08□□□□□ -0.64
CCS-206ENST00000530961 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
CCS-206ENST00000530961 YTHDF2Q9Y5A9 579 aaKnown RBP11.08□□□□□ -0.64
CCS-206ENST00000530961 LENEPQ9Y5L5 61 aa11.08□□□□□ -0.64
CCS-206ENST00000530961 X6R8D5 127 aa11.08□□□□□ -0.64
CCS-206ENST00000530961 IGHV3OR16-12A0A075B7B8 117 aa11.07□□□□□ -0.64
CCS-206ENST00000530961 FAM74A7A6NL05 159 aa11.07□□□□□ -0.64
CCS-206ENST00000530961 HBE1P02100 147 aa11.07□□□□□ -0.64
CCS-206ENST00000530961 TCRAP04437 139 aa11.07□□□□□ -0.64
CCS-206ENST00000530961 CRISP2P16562 243 aa11.07□□□□□ -0.64
CCS-206ENST00000530961 UBE2G2P60604 165 aa11.07□□□□□ -0.64
CCS-206ENST00000530961 GOLT1AQ6ZVE7 132 aa11.07□□□□□ -0.64
CCS-206ENST00000530961 TCEAL7Q9BRU2 100 aa11.07□□□□□ -0.64
CCS-206ENST00000530961 C11orf68Q9H3H3 251 aaKnown RBP11.07□□□□□ -0.64
CCS-206ENST00000530961 A0A0J9YWU9 116 aa11.06□□□□□ -0.64
CCS-206ENST00000530961 FBLL1A6NHQ2 334 aaKnown RBP11.06□□□□□ -0.64
CCS-206ENST00000530961 KLLNB2CW77 178 aa11.06□□□□□ -0.64
CCS-206ENST00000530961 IFNA7P01567 189 aa11.06□□□□□ -0.64
CCS-206ENST00000530961 CASC10Q5T4H9 136 aa11.06□□□□□ -0.64
CCS-206ENST00000530961 Q8NAQ8 132 aa11.06□□□□□ -0.64
CCS-206ENST00000530961 HIST1H2BAQ96A08 127 aa11.06□□□□□ -0.64
CCS-206ENST00000530961 LINC01587Q99440 93 aa11.06□□□□□ -0.64
CCS-206ENST00000530961 ATG101Q9BSB4 218 aa11.06□□□□□ -0.64
CCS-206ENST00000530961 RPH3ALQ9UNE2 315 aa11.06□□□□□ -0.64
CCS-206ENST00000530961 SACSQ9NZJ4 4579 aa11.06□□□□□ -0.64
CCS-206ENST00000530961 IGHV4-28A0A0C4DH34 117 aa11.05□□□□□ -0.64
CCS-206ENST00000530961 F6UZH7 168 aa11.05□□□□□ -0.64
CCS-206ENST00000530961 H7BYZ3 331 aa11.05□□□□□ -0.64
CCS-206ENST00000530961 GPX1P07203 203 aa11.05□□□□□ -0.64
CCS-206ENST00000530961 GNG5P63218 68 aa11.05□□□□□ -0.64
CCS-206ENST00000530961 GFI1BQ5VTD9 330 aa11.05□□□□□ -0.64
CCS-206ENST00000530961 CST9LP1Q5W188 147 aa11.05□□□□□ -0.64
CCS-206ENST00000530961 ALKAL2Q6UX46 152 aa11.05□□□□□ -0.64
CCS-206ENST00000530961 CYB561D1Q8N8Q1 229 aa11.05□□□□□ -0.64
CCS-206ENST00000530961 IL17DQ8TAD2 202 aa11.05□□□□□ -0.64
CCS-206ENST00000530961 A0A1B0GV50 99 aa11.04□□□□□ -0.64
CCS-206ENST00000530961 TMEM189A5PLL7 270 aa11.04□□□□□ -0.64
CCS-206ENST00000530961 PAGE4O60829 102 aa11.04□□□□□ -0.64
CCS-206ENST00000530961 TAS2R60P59551 318 aa11.04□□□□□ -0.64
CCS-206ENST00000530961 PMS2P11Q13670 270 aa11.04□□□□□ -0.64
CCS-206ENST00000530961 KIR3DS1Q14943 382 aa11.04□□□□□ -0.64
CCS-206ENST00000530961 RRN3P1Q2M238 152 aa11.04□□□□□ -0.64
CCS-206ENST00000530961 CCDC28AQ8IWP9 274 aa11.04□□□□□ -0.64
CCS-206ENST00000530961 ZFAND2AQ8N6M9 145 aa11.04□□□□□ -0.64
CCS-206ENST00000530961 NIPSNAP3BQ9BS92 247 aa11.04□□□□□ -0.64
CCS-206ENST00000530961 STAB2Q8WWQ8 2551 aa11.04□□□□□ -0.64
CCS-206ENST00000530961 C7orf71A4D174 169 aa11.03□□□□□ -0.64
CCS-206ENST00000530961 J3KRW8 73 aa11.03□□□□□ -0.64
CCS-206ENST00000530961 RBMY1A1P0DJD3 496 aaKnown RBP11.03□□□□□ -0.64
CCS-206ENST00000530961 RBMY1CP0DJD4 496 aa11.03□□□□□ -0.64
CCS-206ENST00000530961 RNASE4P34096 147 aaKnown RBP11.03□□□□□ -0.64
CCS-206ENST00000530961 BLOC1S1P78537 153 aa11.03□□□□□ -0.64
CCS-206ENST00000530961 RBMY1FQ15415 496 aaKnown RBP11.03□□□□□ -0.64
CCS-206ENST00000530961 TMEM75Q8N9X5 138 aa11.03□□□□□ -0.64
CCS-206ENST00000530961 Q8TAT8 98 aa11.03□□□□□ -0.64
CCS-206ENST00000530961 MANBALQ9NQG1 85 aa11.03□□□□□ -0.64
CCS-206ENST00000530961 TRAV8-1A0A0A6YYK1 113 aa11.02□□□□□ -0.65
CCS-206ENST00000530961 TRAV12-3A0A0B4J271 114 aa11.02□□□□□ -0.65
CCS-206ENST00000530961 PEX7O00628 323 aa11.02□□□□□ -0.65
CCS-206ENST00000530961 CCL20P78556 96 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms