RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 DLEU1O43261 78 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 NDUFS6O75380 124 aaKnown RBP6.74□□□□□ -1.33
CTNND1-227ENST00000530748 VOPP1Q96AW1 172 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 K7EM74 188 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 FXYD5Q96DB9 178 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 KNL1Q8NG31 2342 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 IGHV1-24A0A0C4DH33 117 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 LTAP01374 205 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 ZC2HC1AQ96GY0 325 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 WT1-ASQ06250 92 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 DIAPH2-AS1Q14236 149 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 ZNF664Q8N3J9 261 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 STPG4Q8N801 248 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 ZNRF2Q8NHG8 242 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 TSSC4Q9Y5U2 329 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-227ENST00000530748 GAGE6Q13070 117 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 FOXI2Q6ZQN5 318 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 H3BMM0 161 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 UBE2V1Q13404 147 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 PYY3Q5JQD4 70 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 UBE2WQ96B02 151 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 ZNF524Q96C55 264 aa6.73□□□□□ -1.33
CTNND1-227ENST00000530748 MRPL53Q96EL3 112 aaKnown RBP6.73□□□□□ -1.33
CTNND1-227ENST00000530748 RBAKDNA6NC62 111 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 ADAMTSL5Q6ZMM2 481 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 ASCC3Q8N3C0 2202 aaKnown RBP6.72□□□□□ -1.33
CTNND1-227ENST00000530748 TCF15Q12870 199 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 RBMY1FQ15415 496 aaKnown RBP6.72□□□□□ -1.33
CTNND1-227ENST00000530748 VWC2Q2TAL6 325 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 PYGO2Q9BRQ0 406 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 SNHG12Q9BXW3 62 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 IGHV3-38A0A0C4DH36 116 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 SDHAF1A6NFY7 115 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 C22orf46C9J442 243 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 C9JAW5 83 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 OCIAD2Q56VL3 154 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 HLA-DRB4P13762 266 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 KRTAP27-1Q3LI81 207 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 C10orf91Q5T1B1 145 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 CITED1Q99966 193 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 HLA-DRB4X5D2U9 266 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 UNC13CQ8NB66 2214 aa6.72□□□□□ -1.33
CTNND1-227ENST00000530748 MMP23AO75900 390 aa6.71□□□□□ -1.33
CTNND1-227ENST00000530748 HERVK_113P63121 156 aa6.71□□□□□ -1.33
CTNND1-227ENST00000530748 LGALS9BQ3B8N2 356 aa6.71□□□□□ -1.33
CTNND1-227ENST00000530748 LGALS9CQ6DKI2 356 aa6.71□□□□□ -1.33
CTNND1-227ENST00000530748 VPREB3Q9UKI3 123 aa6.71□□□□□ -1.33
CTNND1-227ENST00000530748 C9JQL5 133 aa6.71□□□□□ -1.33
CTNND1-227ENST00000530748 SOCS3O14543 225 aa6.71□□□□□ -1.33
CTNND1-227ENST00000530748 IGLC1P0CG04 106 aa6.71□□□□□ -1.33
CTNND1-227ENST00000530748 Q71RC1 249 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-227ENST00000530748 ZNF625Q96I27 306 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-227ENST00000530748 ATP6V0BQ99437 205 aa6.71□□□□□ -1.33
CTNND1-227ENST00000530748 RSPO1Q2MKA7 263 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-227ENST00000530748 ZNF48Q96MX3 618 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-227ENST00000530748 C20orf78Q9BR46 151 aa6.71□□□□□ -1.34
CTNND1-227ENST00000530748 COX11Q9Y6N1 276 aa6.71□□□□□ -1.34
CTNND1-227ENST00000530748 SIGLEC8Q9NYZ4 499 aa6.71□□□□□ -1.34
CTNND1-227ENST00000530748 SLAQ13239 276 aa6.71□□□□□ -1.34
CTNND1-227ENST00000530748 IGF2-ASQ6U949 168 aa6.71□□□□□ -1.34
CTNND1-227ENST00000530748 NPBQ8NG41 125 aa6.71□□□□□ -1.34
CTNND1-227ENST00000530748 HELZP42694 1942 aaKnown RBP6.7□□□□□ -1.34
CTNND1-227ENST00000530748 POU2AF1Q16633 256 aa6.7□□□□□ -1.34
CTNND1-227ENST00000530748 MRAPQ8TCY5 172 aa6.7□□□□□ -1.34
CTNND1-227ENST00000530748 CEND1Q8N111 149 aa6.7□□□□□ -1.34
CTNND1-227ENST00000530748 TMEM126AQ9H061 195 aa6.7□□□□□ -1.34
CTNND1-227ENST00000530748 TCF20Q9UGU0 1960 aaKnown RBP6.7□□□□□ -1.34
CTNND1-227ENST00000530748 CACNA1GO43497 2377 aa6.7□□□□□ -1.34
CTNND1-227ENST00000530748 TEX48A0A1B0GUV7 120 aa6.7□□□□□ -1.34
CTNND1-227ENST00000530748 A8MWP6 167 aa6.7□□□□□ -1.34
CTNND1-227ENST00000530748 MAJINQ3KP22 176 aa6.7□□□□□ -1.34
CTNND1-227ENST00000530748 C20orf144Q9BQM9 153 aa6.7□□□□□ -1.34
CTNND1-227ENST00000530748 PFN2P35080 140 aa6.7□□□□□ -1.34
CTNND1-227ENST00000530748 DEFB112Q30KQ8 113 aa6.7□□□□□ -1.34
CTNND1-227ENST00000530748 C9orf118A6NHY6 69 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 SPINK8P0C7L1 97 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 MAP1BP46821 2468 aaKnown RBP6.69□□□□□ -1.34
CTNND1-227ENST00000530748 PRSS57Q6UWY2 283 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 IL17DQ8TAD2 202 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 C11orf52Q96A22 123 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 IGF2BP2-AS1Q96M15 143 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 TRBV20-1A0A075B6N2 111 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 IGFL2Q6UWQ7 119 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 BOD1L2Q8IYS8 172 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 TRAV13-2A0A0B4J235 113 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 F5P12259 2224 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 NPYP01303 97 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 INAFM2P0DMQ5 153 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 FOXE3Q13461 319 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 RHOHQ15669 191 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 DEFB113Q30KQ7 82 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 CFHR4Q92496 578 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 SMIM2Q9BVW6 85 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 A0A1B0GUS0 222 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 C11orf53Q8IXP5 236 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 ZNF491Q8N8L2 437 aa6.69□□□□□ -1.34
CTNND1-227ENST00000530748 COX8AP10176 69 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 TAL2Q16559 108 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 CTSZQ9UBR2 303 aa6.68□□□□□ -1.34
CTNND1-227ENST00000530748 K7EN84 100 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms