RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 hCG_1818297A0A087WSY0 165 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 TRAV8-6A0A0B4J262 113 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 TRAV26-2A0A0B4J265 109 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 C3orf85A0A1B0GTC6 90 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 TRDV1A0A1B0GX56 115 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 A0A1W2PPM0 123 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 MYBPHLA2RUH7 354 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 A8MT66 165 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 H3BMG7 143 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 J3QQQ9 107 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 APOC4-APOC2K7ER74 178 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 GNGT2O14610 69 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 IGKV1D-16P01601 117 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 TRBV12-3P01733 135 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 CXCL1P09341 107 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 SLC25A6P12236 298 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 ZNF708P17019 499 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 CRYGSP22914 178 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 PPP1CCP36873 323 aaKnown RBP2.08□□□□□ -2.08
CTR9-204ENST00000529355 LPAR6P43657 344 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 GALR1P47211 349 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 H2BFSP57053 126 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 HERVK_113P63121 156 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 HLA-DRB3P79483 266 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 ZNF90Q03938 601 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 PRDX1Q06830 199 aaKnown RBP2.08□□□□□ -2.08
CTR9-204ENST00000529355 SLC38A11Q08AI6 406 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 MSMO1Q15800 293 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 VMA21Q3ZAQ7 101 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 C6orf99Q4VX62 202 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 PSMG4Q5JS54 123 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 FAM201AQ5SY85 155 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 C9orf153Q5TBE3 101 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 HRCT1Q6UXD1 115 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 DPPA3Q6W0C5 159 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 SCGB1D4Q6XE38 83 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 ADM2Q7Z4H4 148 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 ATOH7Q8N100 152 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 C3orf22Q8N5N4 141 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 ANKRD29Q8N6D5 301 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 OR4K13Q8NH42 304 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 SGMS2Q8NHU3 365 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 LINC00526Q96FQ7 95 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 LINC01587Q99440 93 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 RTL8AQ9BWD3 113 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 IMUPQ9GZP8 106 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 PLEKHF2Q9H8W4 249 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 CHCHD2Q9Y6H1 151 aaPredicted RBP2.08□□□□□ -2.08
CTR9-204ENST00000529355 ANAPC1Q9H1A4 1944 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 LTBP4Q8N2S1 1624 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 PTPRBP23467 1997 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 DOCK11Q5JSL3 2073 aa2.08□□□□□ -2.08
CTR9-204ENST00000529355 TRBV19A0A075B6N1 114 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 TRBV6-7A0A0A0MS04 114 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 IGKV2-24A0A0C4DH68 120 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 IGKV1-6A0A0C4DH72 117 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 KNCNA6PVL3 124 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 NDUFB6O95139 128 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 IGKV1-39P01597 117 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 P01737 135 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 APOC2P02655 101 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 MT-ATP8P03928 68 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 IGKV1D-39P04432 117 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 SLC25A5P05141 298 aaKnown RBP2.07□□□□□ -2.08
CTR9-204ENST00000529355 CECR9P0C854 216 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 PTHLHP12272 177 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 OPRM1P35372 400 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 PSMB3P49720 205 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 EIF3IQ13347 325 aaKnown RBP2.07□□□□□ -2.08
CTR9-204ENST00000529355 C12orf74Q32Q52 190 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 Q56UQ5 140 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 LAIR2Q6ISS4 152 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 TMEM14EPQ6UXP3 125 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 SGPP2Q8IWX5 399 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 SLC25A45Q8N413 288 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 ZIC4Q8N9L1 334 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 OTOSQ8NHW6 89 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 C18orf32Q8TCD1 76 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 NT5CQ8TCD5 201 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 PPDPFLQ8WWR9 84 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 FMC1Q96HJ9 113 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 TMEM147Q9BVK8 224 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 EIF5A2Q9GZV4 153 aaKnown RBP2.07□□□□□ -2.08
CTR9-204ENST00000529355 DDX60LQ5H9U9 1706 aaKnown RBP2.07□□□□□ -2.08
CTR9-204ENST00000529355 MAST2Q6P0Q8 1798 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 NLRC5Q86WI3 1866 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 DOCK4Q8N1I0 1966 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 TRPM6Q9BX84 2022 aa2.07□□□□□ -2.08
CTR9-204ENST00000529355 PAPPAQ13219 1627 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 RREB1Q92766 1687 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 A0A0G2JMZ2 1700 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 LRRC37A2A6NM11 1700 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 LRRC37AA6NMS7 1700 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 WDR90Q96KV7 1748 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 TOGARAM1Q9Y4F4 1720 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 STRCP1A6NGW2 1772 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 DLEC1Q9Y238 1755 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 SIP14410 1827 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 TRBV20-1A0A075B6N2 111 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms