RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
C11orf54-203ENST00000526335 TTC9CQ8N5M4 171 aa3.95□□□□□ -1.78
C11orf54-203ENST00000526335 NUP35Q8NFH5 326 aa3.95□□□□□ -1.78
C11orf54-203ENST00000526335 OR4A5Q8NH83 315 aa3.95□□□□□ -1.78
C11orf54-203ENST00000526335 CT55Q8WUE5 264 aa3.95□□□□□ -1.78
C11orf54-203ENST00000526335 PLEKHB2Q96CS7 222 aa3.95□□□□□ -1.78
C11orf54-203ENST00000526335 C2orf48Q96LS8 159 aa3.95□□□□□ -1.78
C11orf54-203ENST00000526335 HSD17B10Q99714 261 aaKnown RBP3.95□□□□□ -1.78
C11orf54-203ENST00000526335 SELENOKQ9Y6D0 94 aa3.95□□□□□ -1.78
C11orf54-203ENST00000526335 CFAP54Q96N23 3096 aa3.95□□□□□ -1.78
C11orf54-203ENST00000526335 DOCK9Q9BZ29 2069 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 IGKV3D-15A0A087WSY6 115 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 TRAV5A0A0B4J249 113 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 TRGV8A0A0C4DH27 118 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 TEX50A0A1B0GTY4 177 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 LGALS1P09382 135 aaKnown RBP3.94□□□□□ -1.78
C11orf54-203ENST00000526335 SPINK8P0C7L1 97 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 SMIM13P0DJ93 91 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 FGF6P10767 208 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 VDAC2P45880 294 aaPredicted RBP3.94□□□□□ -1.78
C11orf54-203ENST00000526335 MAP1BP46821 2468 aaKnown RBP3.94□□□□□ -1.78
C11orf54-203ENST00000526335 HBBP68871 147 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 PLGLB1Q02325 96 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 ZNF816Q0VGE8 651 aaPredicted RBP3.94□□□□□ -1.78
C11orf54-203ENST00000526335 SRSF9Q13242 221 aaKnown RBP eCLIP3.94□□□□□ -1.78
C11orf54-203ENST00000526335 CEACAM16Q2WEN9 425 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 Q6P435 159 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 ZNF497Q6ZNH5 498 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 SSX8Q7RTT4 187 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 MRPL55Q7Z7F7 128 aaKnown RBP3.94□□□□□ -1.78
C11orf54-203ENST00000526335 C1orf158Q8N1D5 194 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 TEX29Q8N6K0 151 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 LRRC29Q8WV35 223 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 IL1F10Q8WWZ1 152 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 KIR2DL4Q99706 377 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 PLEKHA3Q9HB20 300 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 DEPPQ9NTK1 212 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 MPC1Q9Y5U8 109 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 CACNA1CQ13936 2221 aa3.94□□□□□ -1.78
C11orf54-203ENST00000526335 KMT2EQ8IZD2 1858 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 SPTBN2O15020 2390 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 IGHV5-51A0A0C4DH38 117 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 FAM236DA0A1B0GTK5 79 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 LYRM9A8MSI8 78 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 ZFAND5O76080 213 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 IGHV3-7P01780 117 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 LINC00694P0DN24 101 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 FAM236CP0DP71 79 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 RPL30P62888 115 aaKnown RBP3.93□□□□□ -1.78
C11orf54-203ENST00000526335 LGALS9BQ3B8N2 356 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 MEIG1Q5JSS6 88 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 LGALS9CQ6DKI2 356 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 Q6ZS92 163 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 Q6ZVQ6 151 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 MIR17HGQ75NE6 70 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 Q8IYB0 196 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 SLC22A18ASQ8N1D0 253 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 RASL10AQ92737 203 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 VGLL1Q99990 258 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 MRPL32Q9BYC8 188 aaKnown RBP3.93□□□□□ -1.78
C11orf54-203ENST00000526335 FGF23Q9GZV9 251 aaPredicted RBP3.93□□□□□ -1.78
C11orf54-203ENST00000526335 HIGD1BQ9P298 99 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 TP73-AS1Q9UF72 201 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 RABAC1Q9UI14 185 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 KIAA2026Q5HYC2 2103 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 CHD6Q8TD26 2715 aa3.93□□□□□ -1.78
C11orf54-203ENST00000526335 LRP4O75096 1905 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 IGLV3-12A0A075B6K2 115 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 A0A0U1RQV1 116 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 SPTY2D1-AS1A0A0U1RR47 76 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 FAM240AA0A1B0GVK7 77 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 TMEM30CPA0ZSE6 113 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 C17orf98A8MV24 154 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 HIGD1CA8MV81 97 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 A8MWL6 223 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 GGTLC3B5MD39 225 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 C10orf142B7Z368 130 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 J3QT63 122 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 NPFFO15130 113 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 SS18L1O75177 396 aaPredicted RBP3.92□□□□□ -1.78
C11orf54-203ENST00000526335 KIR2DS2P43631 304 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 CSN1S1P47710 185 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 DSCR4P56555 118 aaPredicted RBP3.92□□□□□ -1.78
C11orf54-203ENST00000526335 C16orf47Q6ZP98 133 aaPredicted RBP3.92□□□□□ -1.78
C11orf54-203ENST00000526335 LINC00173Q6ZV60 143 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 LINC01561Q8N1V8 128 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 TMEM105Q8N8V8 129 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 TET1Q8NFU7 2136 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 OR10D3Q8NH80 312 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 ATP6V0E2Q8NHE4 81 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 ARPC1AQ92747 370 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 NABP2Q9BQ15 211 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 DCTN5Q9BTE1 182 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 ZNF492Q9P255 531 aa3.92□□□□□ -1.78
C11orf54-203ENST00000526335 ATG2BQ96BY7 2078 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 SMIM1B2RUZ4 78 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 SHISA9B4DS77 424 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 PEX7O00628 323 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 CXCL13O43927 109 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 KLF7O75840 302 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms