RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 PYGO2Q9BRQ0 406 aa8.48□□□□□ -1.05
COLCA1-202ENST00000526150 DNAJC4Q9NNZ3 241 aa8.48□□□□□ -1.05
COLCA1-202ENST00000526150 A0A0J9YY99 117 aa8.47□□□□□ -1.05
COLCA1-202ENST00000526150 GAGE12BA1L429 117 aa8.47□□□□□ -1.05
COLCA1-202ENST00000526150 GAGE7O76087 117 aa8.47□□□□□ -1.05
COLCA1-202ENST00000526150 GAGE12FP0CL80 117 aa8.47□□□□□ -1.05
COLCA1-202ENST00000526150 GAGE12GP0CL81 117 aa8.47□□□□□ -1.05
COLCA1-202ENST00000526150 GAGE12IP0CL82 117 aa8.47□□□□□ -1.05
COLCA1-202ENST00000526150 RPL29P47914 159 aaKnown RBP8.47□□□□□ -1.05
COLCA1-202ENST00000526150 MIC13Q5XKP0 118 aa8.47□□□□□ -1.05
COLCA1-202ENST00000526150 INO80EQ8NBZ0 244 aaPredicted RBP8.47□□□□□ -1.05
COLCA1-202ENST00000526150 PFDN5Q99471 154 aa8.47□□□□□ -1.05
COLCA1-202ENST00000526150 SMIM3Q9BZL3 60 aa8.47□□□□□ -1.05
COLCA1-202ENST00000526150 KCNIP2Q9NS61 270 aa8.47□□□□□ -1.05
COLCA1-202ENST00000526150 MRPS16Q9Y3D3 137 aaKnown RBP8.47□□□□□ -1.05
COLCA1-202ENST00000526150 HSPB11Q9Y547 144 aa8.47□□□□□ -1.05
COLCA1-202ENST00000526150 EREGO14944 169 aa8.46□□□□□ -1.06
COLCA1-202ENST00000526150 DAZ2Q13117 558 aaKnown RBP8.46□□□□□ -1.06
COLCA1-202ENST00000526150 GFI1BQ5VTD9 330 aa8.46□□□□□ -1.06
COLCA1-202ENST00000526150 ZNF680Q8NEM1 530 aa8.46□□□□□ -1.06
COLCA1-202ENST00000526150 ATP5SQ99766 215 aa8.46□□□□□ -1.06
COLCA1-202ENST00000526150 SLC39A9Q9NUM3 307 aa8.46□□□□□ -1.06
COLCA1-202ENST00000526150 TRGV2A0A075B6R0 118 aa8.45□□□□□ -1.06
COLCA1-202ENST00000526150 SLC25A5P05141 298 aaKnown RBP8.45□□□□□ -1.06
COLCA1-202ENST00000526150 OPCMLQ14982 345 aa8.45□□□□□ -1.06
COLCA1-202ENST00000526150 ESRGQ1W209 222 aa8.45□□□□□ -1.06
COLCA1-202ENST00000526150 OR2T35Q8NGX2 323 aa8.45□□□□□ -1.06
COLCA1-202ENST00000526150 CHAC2Q8WUX2 184 aa8.45□□□□□ -1.06
COLCA1-202ENST00000526150 NPCDR1Q9BY65 106 aa8.45□□□□□ -1.06
COLCA1-202ENST00000526150 SCRT2Q9NQ03 307 aa8.45□□□□□ -1.06
COLCA1-202ENST00000526150 FXYD6-FXYD2A0A087WZ82 144 aa8.44□□□□□ -1.06
COLCA1-202ENST00000526150 TRAV12-3A0A0B4J271 114 aa8.44□□□□□ -1.06
COLCA1-202ENST00000526150 NPIPB6E9PJ23 425 aa8.44□□□□□ -1.06
COLCA1-202ENST00000526150 ZNF253O75346 499 aa8.44□□□□□ -1.06
COLCA1-202ENST00000526150 IGLC2P0DOY2 106 aa8.44□□□□□ -1.06
COLCA1-202ENST00000526150 TMEM37Q8WXS4 190 aa8.44□□□□□ -1.06
COLCA1-202ENST00000526150 MRPL53Q96EL3 112 aaKnown RBP8.44□□□□□ -1.06
COLCA1-202ENST00000526150 SAT2Q96F10 170 aaPredicted RBP8.44□□□□□ -1.06
COLCA1-202ENST00000526150 C18orf15Q96N68 181 aa8.44□□□□□ -1.06
COLCA1-202ENST00000526150 WDR61Q9GZS3 305 aaKnown RBP8.44□□□□□ -1.06
COLCA1-202ENST00000526150 ZNF586Q9NXT0 402 aa8.44□□□□□ -1.06
COLCA1-202ENST00000526150 PRELID1Q9Y255 219 aa8.44□□□□□ -1.06
COLCA1-202ENST00000526150 J3KRW8 73 aa8.43□□□□□ -1.06
COLCA1-202ENST00000526150 SNRPCP09234 159 aaKnown RBP8.43□□□□□ -1.06
COLCA1-202ENST00000526150 HOXA5P20719 270 aa8.43□□□□□ -1.06
COLCA1-202ENST00000526150 SLAQ13239 276 aa8.43□□□□□ -1.06
COLCA1-202ENST00000526150 ZNF266Q14584 549 aa8.43□□□□□ -1.06
COLCA1-202ENST00000526150 KIR3DS1Q14943 382 aa8.43□□□□□ -1.06
COLCA1-202ENST00000526150 LINC00477Q96M19 166 aa8.43□□□□□ -1.06
COLCA1-202ENST00000526150 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
COLCA1-202ENST00000526150 HSPG2P98160 4391 aa8.43□□□□□ -1.06
COLCA1-202ENST00000526150 PRAC2D3DTV9 90 aa8.42□□□□□ -1.06
COLCA1-202ENST00000526150 SLC17A3O00476 420 aa8.42□□□□□ -1.06
COLCA1-202ENST00000526150 SIVA1O15304 175 aa8.42□□□□□ -1.06
COLCA1-202ENST00000526150 CT45A10P0DMU9 189 aa8.42□□□□□ -1.06
COLCA1-202ENST00000526150 Q6ZTI0 123 aa8.42□□□□□ -1.06
COLCA1-202ENST00000526150 EIF4E3Q8N5X7 224 aaKnown RBP8.42□□□□□ -1.06
COLCA1-202ENST00000526150 AQP10Q96PS8 301 aa8.42□□□□□ -1.06
COLCA1-202ENST00000526150 LINC00467Q9BRT7 94 aa8.42□□□□□ -1.06
COLCA1-202ENST00000526150 PARD6GQ9BYG4 376 aaPredicted RBP8.42□□□□□ -1.06
COLCA1-202ENST00000526150 TMPRSS5Q9H3S3 457 aa8.42□□□□□ -1.06
COLCA1-202ENST00000526150 ABCA13Q86UQ4 5058 aa8.42□□□□□ -1.06
COLCA1-202ENST00000526150 TRAV9-2A0A087WT02 112 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 A0A096LPF7 62 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 BORCS7-ASMTA0A0B4J1R7 106 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 C7orf71A4D174 169 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 H3BQ15 152 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 H3BTX0 84 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 PRB4P10163 310 aaPredicted RBP8.41□□□□□ -1.06
COLCA1-202ENST00000526150 PDE6HQ13956 83 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 ANXA2RQ3ZCQ2 193 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 Q5BKY6 102 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 FFAR4Q5NUL3 377 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 AAMDCQ9H7C9 122 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 FUT9Q9Y231 359 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 TIMM9Q9Y5J7 89 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 ICOSQ9Y6W8 199 aa8.41□□□□□ -1.06
COLCA1-202ENST00000526150 TRGV1A0A0A0MS02 117 aa8.4□□□□□ -1.06
COLCA1-202ENST00000526150 TRAV5A0A0B4J249 113 aa8.4□□□□□ -1.06
COLCA1-202ENST00000526150 GPX1P07203 203 aa8.4□□□□□ -1.06
COLCA1-202ENST00000526150 NMBP08949 121 aa8.4□□□□□ -1.06
COLCA1-202ENST00000526150 HIST1H1EP10412 219 aaKnown RBP8.4□□□□□ -1.06
COLCA1-202ENST00000526150 KRTAP10-2P60368 255 aa8.4□□□□□ -1.06
COLCA1-202ENST00000526150 ERVFC1-1P60608 527 aa8.4□□□□□ -1.06
COLCA1-202ENST00000526150 ACOT6Q3I5F7 207 aaPredicted RBP8.4□□□□□ -1.06
COLCA1-202ENST00000526150 IBA57Q5T440 356 aaKnown RBP8.4□□□□□ -1.06
COLCA1-202ENST00000526150 CDPF1Q6NVV7 123 aa8.4□□□□□ -1.06
COLCA1-202ENST00000526150 WFDC1Q9HC57 220 aa8.4□□□□□ -1.06
COLCA1-202ENST00000526150 GSN-AS1Q9NRJ2 163 aa8.4□□□□□ -1.06
COLCA1-202ENST00000526150 TMEM14CQ9P0S9 112 aa8.4□□□□□ -1.06
COLCA1-202ENST00000526150 TRBV19A0A075B6N1 114 aa8.39□□□□□ -1.07
COLCA1-202ENST00000526150 A0A1W2PPV4 95 aa8.39□□□□□ -1.07
COLCA1-202ENST00000526150 EPM2AB3EWF7 344 aa8.39□□□□□ -1.07
COLCA1-202ENST00000526150 K7EP13 123 aa8.39□□□□□ -1.07
COLCA1-202ENST00000526150 ARPC5O15511 151 aa8.39□□□□□ -1.07
COLCA1-202ENST00000526150 PAX4O43316 350 aa8.39□□□□□ -1.07
COLCA1-202ENST00000526150 ZNF324O75467 553 aaPredicted RBP8.39□□□□□ -1.07
COLCA1-202ENST00000526150 LINC00315P59091 139 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms