RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 C20orf24Q9BUV8 137 aa1.85□□□□□ -2.11
LINC01339-204ENST00000524094 OR51M1Q9H341 326 aa1.85□□□□□ -2.11
LINC01339-204ENST00000524094 C11orf1Q9H5F2 150 aa1.85□□□□□ -2.11
LINC01339-204ENST00000524094 PATZ1Q9HBE1 687 aaKnown RBP1.85□□□□□ -2.11
LINC01339-204ENST00000524094 MANBALQ9NQG1 85 aa1.85□□□□□ -2.11
LINC01339-204ENST00000524094 SMCO4Q9NRQ5 59 aa1.85□□□□□ -2.11
LINC01339-204ENST00000524094 TNFRSF19Q9NS68 423 aa1.85□□□□□ -2.11
LINC01339-204ENST00000524094 TMEM14BQ9NUH8 114 aa1.85□□□□□ -2.11
LINC01339-204ENST00000524094 PRR34Q9NV39 138 aa1.85□□□□□ -2.11
LINC01339-204ENST00000524094 GNG13Q9P2W3 67 aa1.85□□□□□ -2.11
LINC01339-204ENST00000524094 PEF1Q9UBV8 284 aaKnown RBP1.85□□□□□ -2.11
LINC01339-204ENST00000524094 VAX2Q9UIW0 290 aa1.85□□□□□ -2.11
LINC01339-204ENST00000524094 CARHSP1Q9Y2V2 147 aaKnown RBP1.85□□□□□ -2.11
LINC01339-204ENST00000524094 TBL2Q9Y4P3 447 aaKnown RBP1.85□□□□□ -2.11
LINC01339-204ENST00000524094 TACC2O95359 2948 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 TRAV1-1A0A0B4J248 108 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 IGHV1-3A0A0C4DH29 117 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 TEX50A0A1B0GTY4 177 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 FAM231BA6NCW3 169 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 B4DEV8 164 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 HSBP1L1C9JCN9 74 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 INS-IGF2F8WCM5 200 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 BUB1B-PAK6H3BSN5 160 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 J3QKU1 62 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 J3QLI3 93 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 PDE6DO43924 150 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 COX7A2P2O60397 106 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 NDUFS6O75380 124 aaKnown RBP1.84□□□□□ -2.11
LINC01339-204ENST00000524094 SCO1O75880 301 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 MMP23AO75900 390 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 CNIH1O95406 144 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 CXorf1O96002 111 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 MOSP00540 346 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 CD5P06127 495 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 SOD3P08294 240 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 OR13C7P0DN81 318 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 DEFA4P12838 97 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 PRTN3P24158 256 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 S100PP25815 95 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 BRS3P32247 399 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 GPX4P36969 197 aaPredicted RBP1.84□□□□□ -2.11
LINC01339-204ENST00000524094 VDAC2P45880 294 aaPredicted RBP1.84□□□□□ -2.11
LINC01339-204ENST00000524094 RPL27AP46776 148 aaKnown RBP1.84□□□□□ -2.11
LINC01339-204ENST00000524094 FGF8P55075 233 aaPredicted RBP1.84□□□□□ -2.11
LINC01339-204ENST00000524094 ARF6P62330 175 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 SELENOTP62341 195 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 MEF2BQ02080 365 aaPredicted RBP1.84□□□□□ -2.11
LINC01339-204ENST00000524094 MMDQ15546 238 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 TNXAQ16473 311 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 C2orf83Q53S99 150 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 C10orf91Q5T1B1 145 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 TPTE2P1Q5T6R2 138 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 MINOS1Q5TGZ0 78 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 SLC16A13Q7RTY0 426 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 SLC35E3Q7Z769 313 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 OR11H6Q8NGC7 330 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 OR4P4Q8NGL7 312 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 OR2T10Q8NGZ9 312 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 CLDND2Q8NHS1 167 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 LYPD6BQ8NI32 183 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 TMEM167AQ8TBQ9 72 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 RNASEH2CQ8TDP1 164 aaKnown RBP1.84□□□□□ -2.11
LINC01339-204ENST00000524094 RXFP4Q8TDU9 374 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 C17orf50Q8WW18 174 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 MBD3L1Q8WWY6 194 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 CACNG8Q8WXS5 425 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 TVP23CQ96ET8 276 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 OR5B12Q96R08 314 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 PFDN5Q99471 154 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 MRPL32Q9BYC8 188 aaKnown RBP1.84□□□□□ -2.11
LINC01339-204ENST00000524094 ZNF430Q9H8G1 570 aaPredicted RBP1.84□□□□□ -2.11
LINC01339-204ENST00000524094 SLC25A22Q9H936 323 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 SIRT7Q9NRC8 400 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 TMEM167BQ9NRX6 74 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 RPRMQ9NS64 109 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 METTL1Q9UBP6 276 aaKnown RBP1.84□□□□□ -2.11
LINC01339-204ENST00000524094 PUS1Q9Y606 427 aaKnown RBP eCLIP1.84□□□□□ -2.11
LINC01339-204ENST00000524094 PXMP4Q9Y6I8 212 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 MINOS1-NBL1R4GNA1 71 aa1.84□□□□□ -2.11
LINC01339-204ENST00000524094 ABCA1O95477 2261 aa1.84□□□□□ -2.12
LINC01339-204ENST00000524094 NSD1Q96L73 2696 aaPredicted RBP1.84□□□□□ -2.12
LINC01339-204ENST00000524094 MED13LQ71F56 2210 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 APCP25054 2843 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 TENM3Q9P273 2699 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 IGHV3-72A0A0B4J1Y9 119 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 TRAV3A0A0B4J244 114 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 TRAV25A0A0B4J276 109 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 TCRBV4S1A1TA0A5B7 111 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 NCBP2LA6PVI3 153 aaKnown RBP1.83□□□□□ -2.12
LINC01339-204ENST00000524094 ZNF727A8MUV8 499 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 C1orf196B1AJZ1 125 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 SEC14L6B5MCN3 397 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 C11orf94C9JXX5 98 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 F6UZH7 168 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 TMEM250H0YL14 139 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 H3BQ15 152 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 M0QZK8 103 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 PPP1R2P9O14990 202 aa1.83□□□□□ -2.12
LINC01339-204ENST00000524094 NUPL2O15504 423 aaKnown RBP1.83□□□□□ -2.12
LINC01339-204ENST00000524094 TGOLN2O43493 480 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms