RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	DUXB	A0A1W2PPF3	345 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	C9orf170	A2RU37	121 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	OR2T8	A6NH00	312 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	ZFP92	A6NM28	416 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	GATC	O43716	136 aa	Known RBP	4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	PITX3	O75364	302 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	MT-CO2	P00403	227 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	IGLV1-51	P01701	117 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	GIP	P09681	153 aa	Predicted RBP	4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	OR4E1	P0C645	316 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	SULT1A3	P0DMM9	295 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	SULT1A4	P0DMN0	295 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	RNASE2	P10153	161 aa	Known RBP	4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	IFITM3	Q01628	133 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	RPL18A	Q02543	176 aa	Known RBP	4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	SMCO1	Q147U7	214 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	UNQ9165/PRO28630	Q6UXU0	137 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	GPHB5	Q86YW7	130 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	CEND1	Q8N111	149 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	MRAP	Q8TCY5	172 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	MARC2	Q969Z3	335 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	TMEM101	Q96IK0	257 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	ZNF414	Q96IQ9	312 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	OR4C12	Q96R67	309 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	GFRA4	Q9GZZ7	299 aa		4.98	□□□□□ -1.61
SPIDR-215	ENST00000521798	PIGBOS1	A0A0B4J2F0	54 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	TMEM213	A2RRL7	107 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	C2orf70	A6NJV1	201 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798		A8MWP6	167 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	LGALS9	O00182	355 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	TGOLN2	O43493	480 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	UPK1B	O75841	260 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	TCRB	P04435	133 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	CTSG	P08311	255 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	SPN	P16150	400 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	SNCA	P37840	140 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	TNFRSF9	Q07011	255 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	DHRS2	Q13268	280 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	ZNF846	Q147U1	533 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	ACTL10	Q5JWF8	245 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	PLET1	Q6UQ28	207 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	ZNF493	Q6ZR52	646 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	LYG2	Q86SG7	212 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	ZNF436	Q9C0F3	470 aa	Predicted RBP	4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	ENY2	Q9NPA8	101 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	KLF12	Q9Y4X4	402 aa		4.97	□□□□□ -1.61
SPIDR-215	ENST00000521798	NBEAL2	Q6ZNJ1	2754 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	CEBPZOS	A8MTT3	80 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	ADAP1	O75689	374 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	SLC25A6	P12236	298 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	ZNF138	P52744	262 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	ZNF266	Q14584	549 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	C2orf83	Q53S99	150 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798		Q56UQ5	140 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	UBAC2	Q8NBM4	344 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	OR1S1	Q8NH92	325 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	DTD1	Q8TEA8	209 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	RNF185	Q96GF1	192 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	MRPL36	Q9P0J6	103 aa	Known RBP	4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	CACFD1	Q9UGQ2	172 aa		4.96	□□□□□ -1.62
SPIDR-215	ENST00000521798	TENM3	Q9P273	2699 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	FAM168B	A1KXE4	195 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	IZUMO1R	A6ND01	250 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	CORT	O00230	105 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	NDUFA4	O00483	81 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	BCL2L11	O43521	198 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	C8orf88	P0DMB2	117 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	CBLN1	P23435	193 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	NPY1R	P25929	384 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	OPRK1	P41145	380 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	DEFB114	Q30KQ6	69 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	C5orf47	Q569G3	176 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	GFI1B	Q5VTD9	330 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	C11orf72	Q8NBR9	251 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	OR2K2	Q8NGT1	345 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	OR4X1	Q8NH49	305 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	COQ8A	Q8NI60	647 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	C16orf74	Q96GX8	76 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	URGCP-MRPS24	S4R325	110 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798		U3KQ87	197 aa		4.95	□□□□□ -1.62
SPIDR-215	ENST00000521798	IGHV3OR16-8	A0A075B7F1	116 aa		4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	GNG7	O60262	68 aa		4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	IFNA10	P01566	189 aa		4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	IAPP	P10997	89 aa		4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	DEFB121	Q5J5C9	76 aa		4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	PRSS54	Q6PEW0	395 aa		4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	C20orf203	Q8NBC4	194 aa		4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	DYNLRB2	Q8TF09	96 aa		4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	ZNF431	Q8TF32	576 aa	Predicted RBP	4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	OR10C1	Q96KK4	312 aa		4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	SEC22C	Q9BRL7	303 aa		4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	DAZ1	Q9NQZ3	744 aa	Known RBP	4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	UFC1	Q9Y3C8	167 aa		4.94	□□□□□ -1.62
SPIDR-215	ENST00000521798	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.93	□□□□□ -1.62
SPIDR-215	ENST00000521798	ZNF207	O43670	478 aa	Known RBP	4.93	□□□□□ -1.62
SPIDR-215	ENST00000521798	SYNGR2	O43760	224 aa		4.93	□□□□□ -1.62
SPIDR-215	ENST00000521798	MED6	O75586	246 aa		4.93	□□□□□ -1.62
SPIDR-215	ENST00000521798	IFNA21	P01568	189 aa		4.93	□□□□□ -1.62
SPIDR-215	ENST00000521798	IGKV1-17	P01599	117 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms