RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 C19orf71A6NCJ1 209 aa11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 P01737 135 aa11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 CSN3P07498 182 aa11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 SNRPD3P62318 126 aaKnown RBP11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 OR10J6PQ8NGY7 276 aa11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 DYNLRB2Q8TF09 96 aa11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 FAM210BQ96KR6 192 aa11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 LINC00477Q96M19 166 aa11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 DUX3Q96PT4 197 aa11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 VGLL1Q99990 258 aa11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 MS4A6AQ9H2W1 248 aa11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 SIGLEC8Q9NYZ4 499 aa11.37□□□□□ -0.59
TRAPPC9-205ENST00000518839 IGKV3-7A0A075B6H7 116 aa11.36□□□□□ -0.59
TRAPPC9-205ENST00000518839 TGIF2-C20orf24A0A0A6YYL0 155 aa11.36□□□□□ -0.59
TRAPPC9-205ENST00000518839 PRAC2D3DTV9 90 aa11.36□□□□□ -0.59
TRAPPC9-205ENST00000518839 K7EQG2 157 aa11.36□□□□□ -0.59
TRAPPC9-205ENST00000518839 ZNF138P52744 262 aa11.36□□□□□ -0.59
TRAPPC9-205ENST00000518839 SMUG1Q53HV7 270 aa11.36□□□□□ -0.59
TRAPPC9-205ENST00000518839 ZC2HC1AQ96GY0 325 aa11.36□□□□□ -0.59
TRAPPC9-205ENST00000518839 C20orf173Q96LM9 149 aa11.36□□□□□ -0.59
TRAPPC9-205ENST00000518839 RPP21Q9H633 154 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-205ENST00000518839 TMA7Q9Y2S6 64 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-205ENST00000518839 FN1P02751 2386 aaKnown RBP11.36□□□□□ -0.59
TRAPPC9-205ENST00000518839 A0A1W2PPQ1 181 aa11.35□□□□□ -0.59
TRAPPC9-205ENST00000518839 NPIPB6E9PJ23 425 aa11.35□□□□□ -0.59
TRAPPC9-205ENST00000518839 CXCL1P09341 107 aa11.35□□□□□ -0.59
TRAPPC9-205ENST00000518839 ADAMTSL5Q6ZMM2 481 aa11.35□□□□□ -0.59
TRAPPC9-205ENST00000518839 RBPMS2Q6ZRY4 209 aaKnown RBP11.35□□□□□ -0.59
TRAPPC9-205ENST00000518839 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
TRAPPC9-205ENST00000518839 HIVEP1P15822 2718 aa11.35□□□□□ -0.59
TRAPPC9-205ENST00000518839 BAHCC1Q9P281 2608 aa11.34□□□□□ -0.59
TRAPPC9-205ENST00000518839 TRAV25A0A0B4J276 109 aa11.34□□□□□ -0.59
TRAPPC9-205ENST00000518839 TRBV7-9A0A0J9YWB2 115 aa11.34□□□□□ -0.59
TRAPPC9-205ENST00000518839 SMIM27A0A1W2PRY6 76 aa11.34□□□□□ -0.59
TRAPPC9-205ENST00000518839 A8MWL6 223 aa11.34□□□□□ -0.59
TRAPPC9-205ENST00000518839 TYMSP04818 313 aa11.34□□□□□ -0.59
TRAPPC9-205ENST00000518839 FAM162BQ5T6X4 162 aa11.34□□□□□ -0.59
TRAPPC9-205ENST00000518839 WFDC3Q8IUB2 231 aa11.34□□□□□ -0.59
TRAPPC9-205ENST00000518839 TSKUQ8WUA8 353 aa11.34□□□□□ -0.59
TRAPPC9-205ENST00000518839 NSD1Q96L73 2696 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-205ENST00000518839 FAM231BA6NCW3 169 aa11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 ADARB2-AS1A8MUL3 147 aa11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 C1orf196B1AJZ1 125 aa11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 RPS10P46783 165 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 FAM3BP58499 235 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 ERCC8Q13216 396 aa11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 COX19Q49B96 90 aa11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 OR8A1Q8NGG7 326 aa11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 Q8TAT8 98 aa11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 C8orf49Q96NF6 230 aa11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 ASCL2Q99929 193 aa11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 GFRA4Q9GZZ7 299 aa11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 SRD5A3Q9H8P0 318 aa11.33□□□□□ -0.6
TRAPPC9-205ENST00000518839 XKRY2A2RUG3 117 aa11.32□□□□□ -0.6
TRAPPC9-205ENST00000518839 RAB5BP61020 215 aa11.32□□□□□ -0.6
TRAPPC9-205ENST00000518839 SRSF2Q01130 221 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-205ENST00000518839 DEFB114Q30KQ6 69 aa11.32□□□□□ -0.6
TRAPPC9-205ENST00000518839 NSUN5P1Q3KNT7 163 aa11.32□□□□□ -0.6
TRAPPC9-205ENST00000518839 LINC00322Q6ZN03 302 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-205ENST00000518839 NAT8BQ9UHF3 227 aa11.32□□□□□ -0.6
TRAPPC9-205ENST00000518839 FLNBO75369 2602 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-205ENST00000518839 F8P00451 2351 aa11.32□□□□□ -0.6
TRAPPC9-205ENST00000518839 IZUMO1RA6ND01 250 aa11.31□□□□□ -0.6
TRAPPC9-205ENST00000518839 FABP5P3A8MUU1 101 aa11.31□□□□□ -0.6
TRAPPC9-205ENST00000518839 TFPI2P48307 235 aa11.31□□□□□ -0.6
TRAPPC9-205ENST00000518839 RPS20P60866 119 aaKnown RBP11.31□□□□□ -0.6
TRAPPC9-205ENST00000518839 HIST1H1AQ02539 215 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-205ENST00000518839 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-205ENST00000518839 OR2D3Q8NGH3 330 aa11.31□□□□□ -0.6
TRAPPC9-205ENST00000518839 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-205ENST00000518839 OR4C46A6NHA9 309 aa11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 SH2D1AO60880 128 aa11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 DUSP14O95147 198 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 ZNF688P0C7X2 276 aa11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 PRB4P10163 310 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 CRIP1P50238 77 aa11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 KRTAP10-3P60369 221 aa11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 PSMG4Q5JS54 123 aa11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 HIST2H2BDQ6DRA6 164 aa11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 EBLN2Q6P2I7 272 aa11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 ODF3Q96PU9 254 aa11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 GPR61Q9BZJ8 451 aa11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 SAV1Q9H4B6 383 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-205ENST00000518839 TMEM189A5PLL7 270 aa11.29□□□□□ -0.6
TRAPPC9-205ENST00000518839 Q6AWC8 147 aa11.29□□□□□ -0.6
TRAPPC9-205ENST00000518839 RASL11AQ6T310 242 aa11.29□□□□□ -0.6
TRAPPC9-205ENST00000518839 TMEM61Q8N0U2 210 aa11.29□□□□□ -0.6
TRAPPC9-205ENST00000518839 OR2K2Q8NGT1 345 aa11.29□□□□□ -0.6
TRAPPC9-205ENST00000518839 SELENOKQ9Y6D0 94 aa11.29□□□□□ -0.6
TRAPPC9-205ENST00000518839 CA1P00915 261 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-205ENST00000518839 PF4P02776 101 aa11.28□□□□□ -0.6
TRAPPC9-205ENST00000518839 TCL1AP56279 114 aa11.28□□□□□ -0.6
TRAPPC9-205ENST00000518839 WDR73Q6P4I2 378 aa11.28□□□□□ -0.6
TRAPPC9-205ENST00000518839 FOXI2Q6ZQN5 318 aa11.28□□□□□ -0.6
TRAPPC9-205ENST00000518839 ATP5L2Q7Z4Y8 100 aa11.28□□□□□ -0.6
TRAPPC9-205ENST00000518839 FAM19A4Q96LR4 140 aa11.28□□□□□ -0.6
TRAPPC9-205ENST00000518839 NEU1Q99519 415 aa11.28□□□□□ -0.6
TRAPPC9-205ENST00000518839 A0A0J9YX75 114 aa11.27□□□□□ -0.61
TRAPPC9-205ENST00000518839 HIGD1CA8MV81 97 aa11.27□□□□□ -0.61
TRAPPC9-205ENST00000518839 CRISP2P16562 243 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms