RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 UNQ5815/PRO19632Q6UWF5 114 aa-3.72□□□□□ -3
SNORA40.13-201ENST00000516379 C12orf45Q8N5I9 185 aaPredicted RBP-3.72□□□□□ -3
SNORA40.13-201ENST00000516379 FAM172AQ8WUF8 416 aa-3.72□□□□□ -3
SNORA40.13-201ENST00000516379 DMAC1Q96GE9 116 aa-3.72□□□□□ -3
SNORA40.13-201ENST00000516379 UPF3BQ9BZI7 483 aaKnown RBP-3.72□□□□□ -3
SNORA40.13-201ENST00000516379 TREM1Q9NP99 234 aa-3.72□□□□□ -3
SNORA40.13-201ENST00000516379 GOLGA4Q13439 2230 aaKnown RBP-3.72□□□□□ -3.01
SNORA40.13-201ENST00000516379 COL6A5A8TX70 2615 aa-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 WDR7Q9Y4E6 1490 aa-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 FAM159BA6NKW6 160 aa-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 STAG3L3P0CL85 134 aa-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 ALKAL1Q6UXT8 129 aa-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 IZUMO2Q6UXV1 221 aa-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 TMCO2Q7Z6W1 182 aaPredicted RBP-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 ATP6V1C2Q8NEY4 427 aa-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 PIGXQ8TBF5 258 aa-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 PPP1R1CQ8WVI7 109 aa-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 TP53AIP1Q9HCN2 124 aa-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 BATF3Q9NR55 127 aa-3.73□□□□□ -3.01
SNORA40.13-201ENST00000516379 I3L2K1 104 aa-3.74□□□□□ -3.01
SNORA40.13-201ENST00000516379 APOC4-APOC2K7ER74 178 aa-3.74□□□□□ -3.01
SNORA40.13-201ENST00000516379 STAG3L2P0CL84 134 aa-3.74□□□□□ -3.01
SNORA40.13-201ENST00000516379 COX4I1P13073 169 aa-3.74□□□□□ -3.01
SNORA40.13-201ENST00000516379 COX6B1P14854 86 aa-3.74□□□□□ -3.01
SNORA40.13-201ENST00000516379 SNRPD2P62316 118 aaKnown RBP-3.74□□□□□ -3.01
SNORA40.13-201ENST00000516379 LYPD5Q6UWN5 251 aa-3.74□□□□□ -3.01
SNORA40.13-201ENST00000516379 YPEL2Q96QA6 119 aa-3.74□□□□□ -3.01
SNORA40.13-201ENST00000516379 RAB19A4D1S5 217 aa-3.75□□□□□ -3.01
SNORA40.13-201ENST00000516379 TPST1O60507 370 aa-3.75□□□□□ -3.01
SNORA40.13-201ENST00000516379 BCE1O60756 84 aa-3.75□□□□□ -3.01
SNORA40.13-201ENST00000516379 CCKP06307 115 aa-3.75□□□□□ -3.01
SNORA40.13-201ENST00000516379 ACYP2P14621 99 aa-3.75□□□□□ -3.01
SNORA40.13-201ENST00000516379 AP3S2P59780 193 aa-3.75□□□□□ -3.01
SNORA40.13-201ENST00000516379 PMAIP1Q13794 54 aa-3.75□□□□□ -3.01
SNORA40.13-201ENST00000516379 ZNHIT3Q15649 155 aaPredicted RBP-3.75□□□□□ -3.01
SNORA40.13-201ENST00000516379 C2orf50Q96LR7 162 aa-3.75□□□□□ -3.01
SNORA40.13-201ENST00000516379 TRPM1Q7Z4N2 1603 aa-3.75□□□□□ -3.01
SNORA40.13-201ENST00000516379 TANC2Q9HCD6 1990 aa-3.75□□□□□ -3.01
SNORA40.13-201ENST00000516379 FRMPD1Q5SYB0 1578 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 KIF27Q86VH2 1401 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 EVPLLA8MZ36 301 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 FTCDNL1E5RQL4 147 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 BRI3O95415 125 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 HLA-EP13747 358 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 IDO1P14902 403 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 VMA21Q3ZAQ7 101 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 EIF5AL1Q6IS14 154 aaKnown RBP-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 C20orf196Q8IYI0 205 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 TCTEX1D1Q8N7M0 179 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 OR4C12Q96R67 309 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 KDM3BQ7LBC6 1761 aa-3.76□□□□□ -3.01
SNORA40.13-201ENST00000516379 C5orf42Q9H799 3197 aa-3.77□□□□□ -3.01
SNORA40.13-201ENST00000516379 TEX49A0A1B0GTD5 131 aa-3.77□□□□□ -3.01
SNORA40.13-201ENST00000516379 TMEM30CPA0ZSE6 113 aa-3.77□□□□□ -3.01
SNORA40.13-201ENST00000516379 IGKCP01834 107 aa-3.77□□□□□ -3.01
SNORA40.13-201ENST00000516379 RBP1P09455 135 aa-3.77□□□□□ -3.01
SNORA40.13-201ENST00000516379 UCHL3P15374 230 aa-3.77□□□□□ -3.01
SNORA40.13-201ENST00000516379 DEFA1P59665 94 aa-3.77□□□□□ -3.01
SNORA40.13-201ENST00000516379 GOLT1AQ6ZVE7 132 aa-3.77□□□□□ -3.01
SNORA40.13-201ENST00000516379 ANKRD29Q8N6D5 301 aa-3.77□□□□□ -3.01
SNORA40.13-201ENST00000516379 NPCDR1Q9BY65 106 aa-3.77□□□□□ -3.01
SNORA40.13-201ENST00000516379 XIRP1Q702N8 1843 aaKnown RBP-3.77□□□□□ -3.01
SNORA40.13-201ENST00000516379 CASKIN1Q8WXD9 1431 aa-3.78□□□□□ -3.01
SNORA40.13-201ENST00000516379 NISCHQ9Y2I1 1504 aa-3.78□□□□□ -3.01
SNORA40.13-201ENST00000516379 TRAV26-2A0A0B4J265 109 aa-3.78□□□□□ -3.01
SNORA40.13-201ENST00000516379 TRBV6-1A0A0K0K1D8 114 aa-3.78□□□□□ -3.01
SNORA40.13-201ENST00000516379 LRRN3E7EW58 273 aa-3.78□□□□□ -3.01
SNORA40.13-201ENST00000516379 ORM1P02763 201 aa-3.78□□□□□ -3.01
SNORA40.13-201ENST00000516379 TMED1Q13445 227 aa-3.78□□□□□ -3.01
SNORA40.13-201ENST00000516379 C1orf195Q5TG92 126 aa-3.78□□□□□ -3.01
SNORA40.13-201ENST00000516379 SDF2Q99470 211 aa-3.78□□□□□ -3.01
SNORA40.13-201ENST00000516379 CEP290O15078 2479 aa-3.78□□□□□ -3.01
SNORA40.13-201ENST00000516379 ROBO3Q96MS0 1386 aa-3.78□□□□□ -3.02
SNORA40.13-201ENST00000516379 ARAP1Q96P48 1450 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 DOCK1Q14185 1865 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 CCDC169A6NNP5 214 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 J3QRK9 145 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 PIN1P1O15428 100 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 PTMAP06454 111 aaKnown RBP-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 KLRD1Q13241 179 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 SLAMF1Q13291 335 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 CLEC6AQ6EIG7 209 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 CD302Q8IX05 232 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 KRT222Q8N1A0 295 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 SLC22A13Q9Y226 551 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 USP54Q70EL1 1684 aa-3.79□□□□□ -3.02
SNORA40.13-201ENST00000516379 PAPPAQ13219 1627 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 TRBV7-1A0A0A6YYK4 115 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 EEF1E1-BLOC1S5C9J1V9 151 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 ZNF670-ZNF695F2Z2N8 137 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 BIRC5O15392 142 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 CRYZL1O95825 349 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 NAA20P61599 178 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 SFXN4Q6P4A7 337 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 SMIM19Q96E16 107 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 ATG5Q9H1Y0 275 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 C1orf109Q9NX04 203 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 CEP164Q9UPV0 1460 aa-3.8□□□□□ -3.02
SNORA40.13-201ENST00000516379 N4BP2Q86UW6 1770 aaPredicted RBP-3.81□□□□□ -3.02
SNORA40.13-201ENST00000516379 NUP210LQ5VU65 1888 aa-3.81□□□□□ -3.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms