RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 TENM3Q9P273 2699 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 TRAV1-1A0A0B4J248 108 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 TRBV7-9A0A0J9YWB2 115 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 SMIM9A6NGZ8 99 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 GGTLC3B5MD39 225 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 K7EQM0 130 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 NMBP08949 121 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 PRB4P10163 310 aaPredicted RBP8.65□□□□□ -1.02
SNF8-215ENST00000515572 MIFP14174 115 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 PPT1P50897 306 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 ZNF138P52744 262 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 ERCC8Q13216 396 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 TMEM256Q8N2U0 113 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 NEU1Q99519 415 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 C20orf144Q9BQM9 153 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 TMPRSS5Q9H3S3 457 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 LENEPQ9Y5L5 61 aa8.65□□□□□ -1.02
SNF8-215ENST00000515572 FAM74A7A6NL05 159 aa8.64□□□□□ -1.03
SNF8-215ENST00000515572 CRXO43186 299 aaPredicted RBP8.64□□□□□ -1.03
SNF8-215ENST00000515572 HBE1P02100 147 aa8.64□□□□□ -1.03
SNF8-215ENST00000515572 UBE2G2P60604 165 aa8.64□□□□□ -1.03
SNF8-215ENST00000515572 SUMO1P63165 101 aaKnown RBP8.64□□□□□ -1.03
SNF8-215ENST00000515572 FAM19A4Q96LR4 140 aa8.64□□□□□ -1.03
SNF8-215ENST00000515572 WWC2-AS2Q96NR7 200 aa8.64□□□□□ -1.03
SNF8-215ENST00000515572 VGLL1Q99990 258 aa8.64□□□□□ -1.03
SNF8-215ENST00000515572 TCEAL7Q9BRU2 100 aa8.64□□□□□ -1.03
SNF8-215ENST00000515572 TMEM208Q9BTX3 173 aa8.64□□□□□ -1.03
SNF8-215ENST00000515572 EDA2RQ9HAV5 297 aa8.64□□□□□ -1.03
SNF8-215ENST00000515572 ZNF492Q9P255 531 aa8.64□□□□□ -1.03
SNF8-215ENST00000515572 RPH3ALQ9UNE2 315 aa8.64□□□□□ -1.03
SNF8-215ENST00000515572 YTHDF2Q9Y5A9 579 aaKnown RBP8.64□□□□□ -1.03
SNF8-215ENST00000515572 TRAV12-2A0A075B6T6 113 aa8.63□□□□□ -1.03
SNF8-215ENST00000515572 FBLL1A6NHQ2 334 aaKnown RBP8.63□□□□□ -1.03
SNF8-215ENST00000515572 IFNA7P01567 189 aa8.63□□□□□ -1.03
SNF8-215ENST00000515572 TCRAP04437 139 aa8.63□□□□□ -1.03
SNF8-215ENST00000515572 CRISP2P16562 243 aa8.63□□□□□ -1.03
SNF8-215ENST00000515572 ALKAL2Q6UX46 152 aa8.63□□□□□ -1.03
SNF8-215ENST00000515572 GOLT1AQ6ZVE7 132 aa8.63□□□□□ -1.03
SNF8-215ENST00000515572 C1orf158Q8N1D5 194 aa8.63□□□□□ -1.03
SNF8-215ENST00000515572 ATG101Q9BSB4 218 aa8.63□□□□□ -1.03
SNF8-215ENST00000515572 C11orf68Q9H3H3 251 aaKnown RBP8.63□□□□□ -1.03
SNF8-215ENST00000515572 EPDR1Q9UM22 224 aa8.63□□□□□ -1.03
SNF8-215ENST00000515572 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
SNF8-215ENST00000515572 X6R8D5 127 aa8.63□□□□□ -1.03
SNF8-215ENST00000515572 IGHV3OR16-12A0A075B7B8 117 aa8.62□□□□□ -1.03
SNF8-215ENST00000515572 KLLNB2CW77 178 aa8.62□□□□□ -1.03
SNF8-215ENST00000515572 F6UZH7 168 aa8.62□□□□□ -1.03
SNF8-215ENST00000515572 GNG5P63218 68 aa8.62□□□□□ -1.03
SNF8-215ENST00000515572 GFI1BQ5VTD9 330 aa8.62□□□□□ -1.03
SNF8-215ENST00000515572 CST9LP1Q5W188 147 aa8.62□□□□□ -1.03
SNF8-215ENST00000515572 CYB561D1Q8N8Q1 229 aa8.62□□□□□ -1.03
SNF8-215ENST00000515572 HIST1H2BAQ96A08 127 aa8.62□□□□□ -1.03
SNF8-215ENST00000515572 STAB2Q8WWQ8 2551 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 IGHV4-28A0A0C4DH34 117 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 A0A0J9YWU9 116 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 A0A1B0GV50 99 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 PAGE4O60829 102 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 GPX1P07203 203 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 BLOC1S1P78537 153 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 CCDC28AQ8IWP9 274 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 Q8NAQ8 132 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 IL17DQ8TAD2 202 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 Q8TAT8 98 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 NDFIP1Q9BT67 221 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 MANBALQ9NQG1 85 aa8.61□□□□□ -1.03
SNF8-215ENST00000515572 HUWE1Q7Z6Z7 4374 aaKnown RBP8.6□□□□□ -1.03
SNF8-215ENST00000515572 C7orf71A4D174 169 aa8.6□□□□□ -1.03
SNF8-215ENST00000515572 TMEM189A5PLL7 270 aa8.6□□□□□ -1.03
SNF8-215ENST00000515572 H7BYZ3 331 aa8.6□□□□□ -1.03
SNF8-215ENST00000515572 PEX7O00628 323 aa8.6□□□□□ -1.03
SNF8-215ENST00000515572 IFNA1P01562 189 aa8.6□□□□□ -1.03
SNF8-215ENST00000515572 RRN3P1Q2M238 152 aa8.6□□□□□ -1.03
SNF8-215ENST00000515572 ZFAND2AQ8N6M9 145 aa8.6□□□□□ -1.03
SNF8-215ENST00000515572 TMEM75Q8N9X5 138 aa8.6□□□□□ -1.03
SNF8-215ENST00000515572 LINC01587Q99440 93 aa8.6□□□□□ -1.03
SNF8-215ENST00000515572 NIPSNAP3BQ9BS92 247 aa8.6□□□□□ -1.03
SNF8-215ENST00000515572 GNG13Q9P2W3 67 aa8.6□□□□□ -1.03
SNF8-215ENST00000515572 TRAV8-1A0A0A6YYK1 113 aa8.59□□□□□ -1.03
SNF8-215ENST00000515572 TRAV12-3A0A0B4J271 114 aa8.59□□□□□ -1.03
SNF8-215ENST00000515572 J3KRW8 73 aa8.59□□□□□ -1.03
SNF8-215ENST00000515572 RBMY1A1P0DJD3 496 aaKnown RBP8.59□□□□□ -1.03
SNF8-215ENST00000515572 RBMY1CP0DJD4 496 aa8.59□□□□□ -1.03
SNF8-215ENST00000515572 RNASE4P34096 147 aaKnown RBP8.59□□□□□ -1.03
SNF8-215ENST00000515572 TAGLN2P37802 199 aaKnown RBP8.59□□□□□ -1.03
SNF8-215ENST00000515572 TAS2R60P59551 318 aa8.59□□□□□ -1.03
SNF8-215ENST00000515572 CCL20P78556 96 aa8.59□□□□□ -1.03
SNF8-215ENST00000515572 PMS2P11Q13670 270 aa8.59□□□□□ -1.03
SNF8-215ENST00000515572 KIR3DS1Q14943 382 aa8.59□□□□□ -1.03
SNF8-215ENST00000515572 RBMY1FQ15415 496 aaKnown RBP8.59□□□□□ -1.03
SNF8-215ENST00000515572 TXNDC17Q9BRA2 123 aa8.59□□□□□ -1.03
SNF8-215ENST00000515572 PYGO2Q9BRQ0 406 aa8.59□□□□□ -1.03
SNF8-215ENST00000515572 PSG8Q9UQ74 426 aa8.59□□□□□ -1.03
SNF8-215ENST00000515572 LOC102723971A0A1B0GUV8 181 aa8.58□□□□□ -1.04
SNF8-215ENST00000515572 C11orf94C9JXX5 98 aa8.58□□□□□ -1.04
SNF8-215ENST00000515572 IGLV2-11P01706 119 aa8.58□□□□□ -1.04
SNF8-215ENST00000515572 ATP5G3P48201 142 aa8.58□□□□□ -1.04
SNF8-215ENST00000515572 FLI1Q01543 452 aaPredicted RBP8.58□□□□□ -1.04
SNF8-215ENST00000515572 BTN1A1Q13410 526 aa8.58□□□□□ -1.04
SNF8-215ENST00000515572 SAPCD1Q5SSQ6 148 aa8.58□□□□□ -1.04
SNF8-215ENST00000515572 TEX261Q6UWH6 196 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms