RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 RAB5BP61020 215 aa9.7□□□□□ -0.86
PVT1-203ENST00000513868 RPL11P62913 178 aaKnown RBP9.7□□□□□ -0.86
PVT1-203ENST00000513868 KHDC1LQ5JSQ8 128 aa9.7□□□□□ -0.86
PVT1-203ENST00000513868 GBGT1Q8N5D6 347 aa9.7□□□□□ -0.86
PVT1-203ENST00000513868 DCANP1Q8TF63 244 aa9.7□□□□□ -0.86
PVT1-203ENST00000513868 JMJD8Q96S16 334 aa9.7□□□□□ -0.86
PVT1-203ENST00000513868 GPR61Q9BZJ8 451 aa9.7□□□□□ -0.86
PVT1-203ENST00000513868 AGPAT4-IT1Q9H0P7 198 aa9.7□□□□□ -0.86
PVT1-203ENST00000513868 RPP21Q9H633 154 aaKnown RBP9.7□□□□□ -0.86
PVT1-203ENST00000513868 SORL1Q92673 2214 aa9.69□□□□□ -0.86
PVT1-203ENST00000513868 IGKV3-7A0A075B6H7 116 aa9.69□□□□□ -0.86
PVT1-203ENST00000513868 TCL1AP56279 114 aa9.69□□□□□ -0.86
PVT1-203ENST00000513868 CT83Q5H943 113 aa9.69□□□□□ -0.86
PVT1-203ENST00000513868 SAPCD1Q5SSQ6 148 aa9.69□□□□□ -0.86
PVT1-203ENST00000513868 C9orf47Q6ZRZ4 202 aa9.69□□□□□ -0.86
PVT1-203ENST00000513868 C11orf44Q8N8P7 122 aa9.69□□□□□ -0.86
PVT1-203ENST00000513868 BTF3L4Q96K17 158 aa9.69□□□□□ -0.86
PVT1-203ENST00000513868 P01737 135 aa9.68□□□□□ -0.86
PVT1-203ENST00000513868 TSKUQ8WUA8 353 aa9.68□□□□□ -0.86
PVT1-203ENST00000513868 FRZBQ92765 325 aa9.68□□□□□ -0.86
PVT1-203ENST00000513868 C2CD3Q4AC94 2353 aa9.68□□□□□ -0.86
PVT1-203ENST00000513868 BMI1P35226 326 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 ZNF80P51504 273 aaPredicted RBP9.67□□□□□ -0.86
PVT1-203ENST00000513868 PROK1P58294 105 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 DEFB1P60022 68 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 GTSF1Q8WW33 167 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 DLX4Q92988 240 aaPredicted RBP9.67□□□□□ -0.86
PVT1-203ENST00000513868 DAZAP1Q96EP5 407 aaKnown RBP9.67□□□□□ -0.86
PVT1-203ENST00000513868 RAX2Q96IS3 184 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 NEU1Q99519 415 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 CITED2Q99967 270 aaPredicted RBP9.67□□□□□ -0.86
PVT1-203ENST00000513868 PPP1R14DQ9NXH3 145 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 F8P00451 2351 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 IZUMO1RA6ND01 250 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 HAX1O00165 279 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 HIST1H2BKO60814 126 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 HIST1H2BJP06899 126 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 ZNF705DP0CH99 300 aaPredicted RBP9.67□□□□□ -0.86
PVT1-203ENST00000513868 ZNF705BP0CI00 300 aaPredicted RBP9.67□□□□□ -0.86
PVT1-203ENST00000513868 HIST1H2BOP23527 126 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 HIST1H2BBP33778 126 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 HIST1H2BDP58876 126 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 HIST1H2BCP62807 126 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 SRSF2Q01130 221 aaKnown RBP9.67□□□□□ -0.86
PVT1-203ENST00000513868 FHL3Q13643 280 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 HIST2H2BEQ16778 126 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 ACTL10Q5JWF8 245 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.67□□□□□ -0.86
PVT1-203ENST00000513868 ZNF738Q8NE65 137 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 NUP35Q8NFH5 326 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 OR4B1Q8NGF8 309 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 DPF1Q92782 380 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 HIST1H2BHQ93079 126 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 HIST1H2BNQ99877 126 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 HIST1H2BMQ99879 126 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 MS4A6AQ9H2W1 248 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 RNF114Q9Y508 228 aa9.67□□□□□ -0.86
PVT1-203ENST00000513868 AGRNO00468 2067 aa9.66□□□□□ -0.86
PVT1-203ENST00000513868 HIGD1CA8MV81 97 aa9.66□□□□□ -0.86
PVT1-203ENST00000513868 A8MWL6 223 aa9.66□□□□□ -0.86
PVT1-203ENST00000513868 SPINK4O60575 86 aa9.66□□□□□ -0.86
PVT1-203ENST00000513868 SH2D1AO60880 128 aa9.66□□□□□ -0.86
PVT1-203ENST00000513868 CRLF1O75462 422 aa9.66□□□□□ -0.86
PVT1-203ENST00000513868 ZNF138P52744 262 aa9.66□□□□□ -0.86
PVT1-203ENST00000513868 RPL19P84098 196 aaKnown RBP9.66□□□□□ -0.86
PVT1-203ENST00000513868 OR9G4Q8NGQ1 327 aa9.66□□□□□ -0.86
PVT1-203ENST00000513868 K7EQG2 157 aa9.65□□□□□ -0.86
PVT1-203ENST00000513868 OVOL1O14753 267 aa9.65□□□□□ -0.86
PVT1-203ENST00000513868 TCF21O43680 179 aa9.65□□□□□ -0.86
PVT1-203ENST00000513868 TRGC1P0CF51 173 aa9.65□□□□□ -0.86
PVT1-203ENST00000513868 CT45A10P0DMU9 189 aa9.65□□□□□ -0.86
PVT1-203ENST00000513868 FAM162BQ5T6X4 162 aa9.65□□□□□ -0.86
PVT1-203ENST00000513868 ZNF575Q86XF7 245 aa9.65□□□□□ -0.86
PVT1-203ENST00000513868 OR2D3Q8NGH3 330 aa9.65□□□□□ -0.86
PVT1-203ENST00000513868 GFRA4Q9GZZ7 299 aa9.65□□□□□ -0.86
PVT1-203ENST00000513868 NAT8BQ9UHF3 227 aa9.65□□□□□ -0.86
PVT1-203ENST00000513868 TSSC4Q9Y5U2 329 aaPredicted RBP9.65□□□□□ -0.86
PVT1-203ENST00000513868 NIPBLQ6KC79 2804 aaeCLIP9.65□□□□□ -0.872e-6■■■■□ 25.1
PVT1-203ENST00000513868 A0A1W2PRX2 142 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 FAM231BA6NCW3 169 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 C5orf52A6NGY3 159 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 ADARB2-AS1A8MUL3 147 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 CSN3P07498 182 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 GZMBP10144 247 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 FOXA3P55318 350 aaPredicted RBP9.64□□□□□ -0.87
PVT1-203ENST00000513868 FABP9Q0Z7S8 132 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 SMUG1Q53HV7 270 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 TMEM78Q5T7P6 136 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 WFDC3Q8IUB2 231 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 PEMTQ9UBM1 199 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 F6UB75 175 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 CCL24O00175 119 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 KRTAP10-3P60369 221 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 SAMD13Q5VXD3 122 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 MRPL54Q6P161 138 aaKnown RBP9.64□□□□□ -0.87
PVT1-203ENST00000513868 OR8A1Q8NGG7 326 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 LINC00477Q96M19 166 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 NDFIP1Q9BT67 221 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 TRAPPC1Q9Y5R8 145 aa9.64□□□□□ -0.87
PVT1-203ENST00000513868 ID1P41134 155 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms