RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 RRAS2P62070 204 aaPredicted RBP7.23□□□□□ -1.25
DDX41-216ENST00000513562 ERCC8Q13216 396 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 GUK1Q16774 197 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 TMEM128Q5BJH2 165 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 OR10G4Q8NGN3 311 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 BLNKQ8WV28 456 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 TMEM37Q8WXS4 190 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 ZNF479Q96JC4 524 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 ARPC5LQ9BPX5 153 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 CHAC1Q9BUX1 264 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 NPVFQ9HCQ7 196 aa7.23□□□□□ -1.25
DDX41-216ENST00000513562 IGHV1OR15-1A0A075B7D0 117 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 M0R3E3 92 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 RGS13O14921 159 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 RS1O15537 224 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 COX7A2P2O60397 106 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 NOL3O60936 208 aaKnown RBP7.22□□□□□ -1.25
DDX41-216ENST00000513562 ZNF253O75346 499 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 CCNKO75909 580 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 NMBP08949 121 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 ASAH1Q13510 395 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 PRR9Q5T870 116 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 LINC00477Q96M19 166 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 AGPAT4-IT1Q9H0P7 198 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 MCUBQ9NWR8 336 aa7.22□□□□□ -1.25
DDX41-216ENST00000513562 GOSR2O14653 212 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 AGPAT2O15120 278 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 GPX1P07203 203 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 VAMP1P23763 118 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 POLR2GP62487 172 aaKnown RBP eCLIP7.21□□□□□ -1.26
DDX41-216ENST00000513562 ID3Q02535 119 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 LAGE3Q14657 143 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 TDRG1Q3Y452 100 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 C10orf113Q5VZT2 155 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 Q6ZQT7 251 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 SH2D6Q7Z4S9 175 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 ZFAND2AQ8N6M9 145 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 OR10P1Q8NGE3 313 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 CIRBP-AS1Q8TBR5 109 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 TM2D2Q9BX73 214 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 SLC25A31Q9H0C2 315 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 PSENENQ9NZ42 101 aa7.21□□□□□ -1.26
DDX41-216ENST00000513562 CCDC59Q9P031 241 aaKnown RBP7.21□□□□□ -1.26
DDX41-216ENST00000513562 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.2□□□□□ -1.26
DDX41-216ENST00000513562 LOC100131303A0A0U1RQF7 123 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 RGS5O15539 181 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 HOXB5P09067 269 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 PPT1P50897 306 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 IL18Q14116 193 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 ZNF846Q147U1 533 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 CTF1Q16619 201 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 LINC01620Q4KN68 170 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 TMEM14EPQ6UXP3 125 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 RASL10AQ92737 203 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 MGAT4CQ9UBM8 478 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 BOLA1Q9Y3E2 137 aa7.2□□□□□ -1.26
DDX41-216ENST00000513562 TRBV19A0A075B6N1 114 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 TRAV8-6A0A0B4J262 113 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 CTDSP2O14595 271 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 LECT2O14960 151 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 SSSCA1O60232 199 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 SFT2D2O95562 160 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 IGLV2-8P01709 118 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 METTL15P1P0C7V9 234 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 MT1HL1P0DM35 61 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 TNFSF8P32971 234 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 C9orf47Q6ZRZ4 202 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 SMIM8Q96KF7 97 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 MGST2Q99735 147 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 SRRQ9GZT4 340 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 NAA50Q9GZZ1 169 aaKnown RBP7.19□□□□□ -1.26
DDX41-216ENST00000513562 RABL2AQ9UBK7 228 aaPredicted RBP7.19□□□□□ -1.26
DDX41-216ENST00000513562 PRELID1Q9Y255 219 aa7.19□□□□□ -1.26
DDX41-216ENST00000513562 TRAV4A0A0B4J268 109 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 CCDC160A6NGH7 325 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 NDUFB4O95168 129 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 IGHV3-30P01768 117 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 IGHV3-33P01772 117 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 IGHV3-30-5P0DP03 117 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 HNRNPA3P51991 378 aaKnown RBP7.18□□□□□ -1.26
DDX41-216ENST00000513562 PPP1R1AQ13522 171 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 ACOT6Q3I5F7 207 aaPredicted RBP7.18□□□□□ -1.26
DDX41-216ENST00000513562 OR10J3Q5JRS4 329 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 NHLRC2Q8NBF2 726 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 GGACTQ9BVM4 153 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 DNAJC4Q9NNZ3 241 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 TNXBP22105 4242 aa7.18□□□□□ -1.26
DDX41-216ENST00000513562 IGKV2-40A0A087WW87 121 aaPredicted RBP7.17□□□□□ -1.26
DDX41-216ENST00000513562 IGKV2D-40P01614 121 aaPredicted RBP7.17□□□□□ -1.26
DDX41-216ENST00000513562 ARL16Q0P5N6 197 aa7.17□□□□□ -1.26
DDX41-216ENST00000513562 TMEM78Q5T7P6 136 aa7.17□□□□□ -1.26
DDX41-216ENST00000513562 RAB2BQ8WUD1 216 aa7.17□□□□□ -1.26
DDX41-216ENST00000513562 DAZAP1Q96EP5 407 aaKnown RBP7.17□□□□□ -1.26
DDX41-216ENST00000513562 DIRAS2Q96HU8 199 aa7.17□□□□□ -1.26
DDX41-216ENST00000513562 SPXQ9BT56 116 aa7.17□□□□□ -1.26
DDX41-216ENST00000513562 ZNF492Q9P255 531 aa7.17□□□□□ -1.26
DDX41-216ENST00000513562 TSC22D2O75157 780 aa7.16□□□□□ -1.26
DDX41-216ENST00000513562 HIST1H1EP10412 219 aaKnown RBP7.16□□□□□ -1.26
DDX41-216ENST00000513562 GATA1P15976 413 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms