RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 TSTD3H0UI37 97 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 S100GP29377 79 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 SDC2P34741 201 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 TMEM128Q5BJH2 165 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 OR5H6Q8NGV6 325 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 GRPEL2Q8TAA5 225 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 THEM6Q8WUY1 208 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 OR4C12Q96R67 309 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 EFCAB11Q9BUY7 163 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 CST11Q9H112 138 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 FKBP11Q9NYL4 201 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 TRAPPC2LQ9UL33 140 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 TPRKBQ9Y3C4 175 aa0.59□□□□□ -2.31
CHD1-207ENST00000511628 NINQ8N4C6 2090 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 ZGRF1Q86YA3 2104 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 ARL5CA6NH57 179 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 C5orf58C9J3I9 102 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 H3BMG7 143 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 IGHV3-33P01772 117 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 TPT1P13693 172 aaKnown RBP0.58□□□□□ -2.32
CHD1-207ENST00000511628 POLR2HP52434 150 aaKnown RBP0.58□□□□□ -2.32
CHD1-207ENST00000511628 B2MP61769 119 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 RPS28P62857 69 aaKnown RBP0.58□□□□□ -2.32
CHD1-207ENST00000511628 SAMD13Q5VXD3 122 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 LINC00305Q7Z4B0 112 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 TMEM35BQ8NCS4 154 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 OR10AC1Q8NH08 325 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 CLEC2BQ92478 149 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 MED31Q9Y3C7 131 aa0.58□□□□□ -2.32
CHD1-207ENST00000511628 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
CHD1-207ENST00000511628 ZCCHC11Q5TAX3 1644 aaKnown RBP0.57□□□□□ -2.32
CHD1-207ENST00000511628 KIAA1107Q9UPP5 1409 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 FER1L6Q2WGJ9 1857 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.57□□□□□ -2.32
CHD1-207ENST00000511628 TRAV13-1A0A0B4J241 112 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 TRBV7-6A0A0J9YX20 115 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 TRBV27A0A0K0K1C4 114 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 GNG14A0A1W2PPG7 69 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 H0YJX3 145 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 TRACP01848 142 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 SAA1P0DJI8 122 aaPredicted RBP0.57□□□□□ -2.32
CHD1-207ENST00000511628 RPS3P23396 243 aaKnown RBP eCLIP0.57□□□□□ -2.32
CHD1-207ENST00000511628 FXYD4P59646 89 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 CCSMST1Q4G0I0 132 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 SPATA45Q537H7 98 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 LINC00299Q6ZSB3 139 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 OR5AK2Q8NH90 309 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 PYDC1Q8WXC3 89 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 PRELID3AQ96N28 172 aa0.57□□□□□ -2.32
CHD1-207ENST00000511628 BOKQ9UMX3 212 aaPredicted RBP0.57□□□□□ -2.32
CHD1-207ENST00000511628 BCL9O00512 1426 aa0.56□□□□□ -2.32
CHD1-207ENST00000511628 TCOF1Q13428 1488 aaKnown RBP0.56□□□□□ -2.32
CHD1-207ENST00000511628 PRORSD1PA6NEY8 169 aa0.56□□□□□ -2.32
CHD1-207ENST00000511628 FOXA3P55318 350 aaPredicted RBP0.56□□□□□ -2.32
CHD1-207ENST00000511628 DNAJB13P59910 316 aa0.56□□□□□ -2.32
CHD1-207ENST00000511628 NEDD8Q15843 81 aa0.56□□□□□ -2.32
CHD1-207ENST00000511628 OCIAD2Q56VL3 154 aa0.56□□□□□ -2.32
CHD1-207ENST00000511628 TAC4Q86UU9 113 aa0.56□□□□□ -2.32
CHD1-207ENST00000511628 C5orf17Q8NAS9 161 aa0.56□□□□□ -2.32
CHD1-207ENST00000511628 ANP32BQ92688 251 aaKnown RBP0.56□□□□□ -2.32
CHD1-207ENST00000511628 CCDC115Q96NT0 180 aa0.56□□□□□ -2.32
CHD1-207ENST00000511628 NABP2Q9BQ15 211 aa0.56□□□□□ -2.32
CHD1-207ENST00000511628 GINS2Q9Y248 185 aa0.56□□□□□ -2.32
CHD1-207ENST00000511628 USP54Q70EL1 1684 aa0.56□□□□□ -2.32
CHD1-207ENST00000511628 FAM135BQ49AJ0 1406 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 DLC1Q96QB1 1528 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 BORCS7-ASMTA0A0B4J1R7 106 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 A0A0J9YY99 117 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 LOC107984640A0A0U1RRK4 108 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 C3orf85A0A1B0GTC6 90 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 LOC107986453A0A1B0GWG9 222 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 A0A1W2PPM0 123 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 SULT1C4O75897 302 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 DBIP07108 87 aaKnown RBP0.55□□□□□ -2.32
CHD1-207ENST00000511628 ETV6P41212 452 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 MAXP61244 160 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 ASB16-AS1Q495Z4 193 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 LINC00575Q6W349 94 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 TMEM229BQ8NBD8 167 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 MAGOHBQ96A72 148 aaKnown RBP0.55□□□□□ -2.32
CHD1-207ENST00000511628 AP1S3Q96PC3 154 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 CIB3Q96Q77 187 aaPredicted RBP0.55□□□□□ -2.32
CHD1-207ENST00000511628 AIF1LQ9BQI0 150 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 MRPL40Q9NQ50 206 aaKnown RBP0.55□□□□□ -2.32
CHD1-207ENST00000511628 C19orf12Q9NSK7 152 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 CBLN4Q9NTU7 201 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 NDUFAF1Q9Y375 327 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 MPC1Q9Y5U8 109 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 SPTBP11277 2137 aa0.55□□□□□ -2.32
CHD1-207ENST00000511628 A2MP01023 1474 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 CTTNBP2Q8WZ74 1663 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 PNMA8CA0A1B0GUJ8 204 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 NUPR2A6NF83 97 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 A6NN06 94 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 BBIP1A8MTZ0 92 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 M0QZK8 103 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 NBEAP1P0C6P0 100 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 RPL22P35268 128 aaKnown RBP0.54□□□□□ -2.32
CHD1-207ENST00000511628 GTF2A1P52655 376 aaPredicted RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms