RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 RNASE7Q9H1E1 156 aaKnown RBP11.49□□□□□ -0.57
SCLT1-209ENST00000511426 TRAV25A0A0B4J276 109 aa11.48□□□□□ -0.57
SCLT1-209ENST00000511426 P01737 135 aa11.48□□□□□ -0.57
SCLT1-209ENST00000511426 ZNF138P52744 262 aa11.48□□□□□ -0.57
SCLT1-209ENST00000511426 OR10J6PQ8NGY7 276 aa11.48□□□□□ -0.57
SCLT1-209ENST00000511426 GFRA4Q9GZZ7 299 aa11.48□□□□□ -0.57
SCLT1-209ENST00000511426 MS4A6AQ9H2W1 248 aa11.48□□□□□ -0.57
SCLT1-209ENST00000511426 SMIM27A0A1W2PRY6 76 aa11.47□□□□□ -0.57
SCLT1-209ENST00000511426 ZNF705FA8MVS1 300 aaPredicted RBP11.47□□□□□ -0.57
SCLT1-209ENST00000511426 A8MWL6 223 aa11.47□□□□□ -0.57
SCLT1-209ENST00000511426 K7EQG2 157 aa11.47□□□□□ -0.57
SCLT1-209ENST00000511426 SMUG1Q53HV7 270 aa11.47□□□□□ -0.57
SCLT1-209ENST00000511426 PRR27Q6MZM9 219 aa11.47□□□□□ -0.57
SCLT1-209ENST00000511426 RPP21Q9H633 154 aaKnown RBP11.47□□□□□ -0.57
SCLT1-209ENST00000511426 CSN3P07498 182 aa11.46□□□□□ -0.57
SCLT1-209ENST00000511426 FAM3BP58499 235 aaPredicted RBP11.46□□□□□ -0.57
SCLT1-209ENST00000511426 COX19Q49B96 90 aa11.46□□□□□ -0.57
SCLT1-209ENST00000511426 IGFL4Q6B9Z1 124 aa11.46□□□□□ -0.57
SCLT1-209ENST00000511426 TSKUQ8WUA8 353 aa11.46□□□□□ -0.57
SCLT1-209ENST00000511426 VGLL1Q99990 258 aa11.46□□□□□ -0.57
SCLT1-209ENST00000511426 SAV1Q9H4B6 383 aaPredicted RBP11.46□□□□□ -0.57
SCLT1-209ENST00000511426 TGIF2-C20orf24A0A0A6YYL0 155 aa11.46□□□□□ -0.58
SCLT1-209ENST00000511426 A0A1W2PPQ1 181 aa11.46□□□□□ -0.58
SCLT1-209ENST00000511426 SRSF2Q01130 221 aaKnown RBP11.46□□□□□ -0.58
SCLT1-209ENST00000511426 FAM162BQ5T6X4 162 aa11.46□□□□□ -0.58
SCLT1-209ENST00000511426 DYNLRB2Q8TF09 96 aa11.46□□□□□ -0.58
SCLT1-209ENST00000511426 ZC2HC1AQ96GY0 325 aa11.46□□□□□ -0.58
SCLT1-209ENST00000511426 SRD5A3Q9H8P0 318 aa11.46□□□□□ -0.58
SCLT1-209ENST00000511426 XKRY2A2RUG3 117 aa11.45□□□□□ -0.58
SCLT1-209ENST00000511426 PRAC2D3DTV9 90 aa11.45□□□□□ -0.58
SCLT1-209ENST00000511426 CXCL1P09341 107 aa11.45□□□□□ -0.58
SCLT1-209ENST00000511426 EDN2P20800 178 aa11.45□□□□□ -0.58
SCLT1-209ENST00000511426 ADAMTSL5Q6ZMM2 481 aa11.45□□□□□ -0.58
SCLT1-209ENST00000511426 C11orf44Q8N8P7 122 aa11.45□□□□□ -0.58
SCLT1-209ENST00000511426 OR8A1Q8NGG7 326 aa11.45□□□□□ -0.58
SCLT1-209ENST00000511426 ASCL2Q99929 193 aa11.45□□□□□ -0.58
SCLT1-209ENST00000511426 AGPAT4-IT1Q9H0P7 198 aa11.45□□□□□ -0.58
SCLT1-209ENST00000511426 ADARB2-AS1A8MUL3 147 aa11.44□□□□□ -0.58
SCLT1-209ENST00000511426 Q6AWC8 147 aa11.44□□□□□ -0.58
SCLT1-209ENST00000511426 RASL11AQ6T310 242 aa11.44□□□□□ -0.58
SCLT1-209ENST00000511426 RBPMS2Q6ZRY4 209 aaKnown RBP11.44□□□□□ -0.58
SCLT1-209ENST00000511426 C20orf173Q96LM9 149 aa11.44□□□□□ -0.58
SCLT1-209ENST00000511426 ODF3Q96PU9 254 aa11.44□□□□□ -0.58
SCLT1-209ENST00000511426 NAT8BQ9UHF3 227 aa11.44□□□□□ -0.58
SCLT1-209ENST00000511426 A0A1W2PRX2 142 aa11.43□□□□□ -0.58
SCLT1-209ENST00000511426 C1orf196B1AJZ1 125 aa11.43□□□□□ -0.58
SCLT1-209ENST00000511426 RPS20P60866 119 aaKnown RBP11.43□□□□□ -0.58
SCLT1-209ENST00000511426 OR2K2Q8NGT1 345 aa11.43□□□□□ -0.58
SCLT1-209ENST00000511426 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
SCLT1-209ENST00000511426 MTORP42345 2549 aa11.43□□□□□ -0.58
SCLT1-209ENST00000511426 IGKV3-7A0A075B6H7 116 aa11.43□□□□□ -0.58
SCLT1-209ENST00000511426 RPS10P46783 165 aaKnown RBP11.43□□□□□ -0.58
SCLT1-209ENST00000511426 FOXA3P55318 350 aaPredicted RBP11.43□□□□□ -0.58
SCLT1-209ENST00000511426 RAB5BP61020 215 aa11.43□□□□□ -0.58
SCLT1-209ENST00000511426 DEFB114Q30KQ6 69 aa11.43□□□□□ -0.58
SCLT1-209ENST00000511426 LINC00322Q6ZN03 302 aaPredicted RBP11.43□□□□□ -0.58
SCLT1-209ENST00000511426 ATP5L2Q7Z4Y8 100 aa11.43□□□□□ -0.58
SCLT1-209ENST00000511426 DUX3Q96PT4 197 aa11.43□□□□□ -0.58
SCLT1-209ENST00000511426 TMA7Q9Y2S6 64 aaKnown RBP11.43□□□□□ -0.58
SCLT1-209ENST00000511426 IZUMO1RA6ND01 250 aa11.42□□□□□ -0.58
SCLT1-209ENST00000511426 OR4C46A6NHA9 309 aa11.42□□□□□ -0.58
SCLT1-209ENST00000511426 FABP5P3A8MUU1 101 aa11.42□□□□□ -0.58
SCLT1-209ENST00000511426 HIST1H1AQ02539 215 aaPredicted RBP11.42□□□□□ -0.58
SCLT1-209ENST00000511426 Q8TAT8 98 aa11.42□□□□□ -0.58
SCLT1-209ENST00000511426 C8orf49Q96NF6 230 aa11.42□□□□□ -0.58
SCLT1-209ENST00000511426 HIVEP1P15822 2718 aa11.41□□□□□ -0.58
SCLT1-209ENST00000511426 DUSP14O95147 198 aaKnown RBP11.41□□□□□ -0.58
SCLT1-209ENST00000511426 CRIP1P50238 77 aa11.41□□□□□ -0.58
SCLT1-209ENST00000511426 ERCC8Q13216 396 aa11.41□□□□□ -0.58
SCLT1-209ENST00000511426 FOXI2Q6ZQN5 318 aa11.41□□□□□ -0.58
SCLT1-209ENST00000511426 APRG1Q8IVJ8 170 aa11.41□□□□□ -0.58
SCLT1-209ENST00000511426 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
SCLT1-209ENST00000511426 NSD1Q96L73 2696 aaPredicted RBP11.41□□□□□ -0.58
SCLT1-209ENST00000511426 FN1P02751 2386 aaKnown RBP11.41□□□□□ -0.58
SCLT1-209ENST00000511426 SH2D1AO60880 128 aa11.4□□□□□ -0.58
SCLT1-209ENST00000511426 MT-ND6P03923 174 aa11.4□□□□□ -0.58
SCLT1-209ENST00000511426 CRISP2P16562 243 aa11.4□□□□□ -0.58
SCLT1-209ENST00000511426 EBLN2Q6P2I7 272 aa11.4□□□□□ -0.58
SCLT1-209ENST00000511426 WDR73Q6P4I2 378 aa11.4□□□□□ -0.58
SCLT1-209ENST00000511426 TMEM61Q8N0U2 210 aa11.4□□□□□ -0.58
SCLT1-209ENST00000511426 FAM19A4Q96LR4 140 aa11.4□□□□□ -0.58
SCLT1-209ENST00000511426 NEU1Q99519 415 aa11.4□□□□□ -0.58
SCLT1-209ENST00000511426 GPR61Q9BZJ8 451 aa11.4□□□□□ -0.58
SCLT1-209ENST00000511426 CMC4P56277 68 aaPredicted RBP11.4□□□□□ -0.59
SCLT1-209ENST00000511426 PSMG4Q5JS54 123 aa11.4□□□□□ -0.59
SCLT1-209ENST00000511426 WFDC3Q8IUB2 231 aa11.4□□□□□ -0.59
SCLT1-209ENST00000511426 HIGD1CA8MV81 97 aa11.39□□□□□ -0.59
SCLT1-209ENST00000511426 ZNF688P0C7X2 276 aa11.39□□□□□ -0.59
SCLT1-209ENST00000511426 NSUN5P1Q3KNT7 163 aa11.39□□□□□ -0.59
SCLT1-209ENST00000511426 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
SCLT1-209ENST00000511426 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.39□□□□□ -0.59
SCLT1-209ENST00000511426 GNB1LQ9BYB4 327 aa11.39□□□□□ -0.59
SCLT1-209ENST00000511426 A0A0J9YX75 114 aa11.38□□□□□ -0.59
SCLT1-209ENST00000511426 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
SCLT1-209ENST00000511426 KRTAP10-3P60369 221 aa11.38□□□□□ -0.59
SCLT1-209ENST00000511426 CD300EQ496F6 205 aaPredicted RBP11.38□□□□□ -0.59
SCLT1-209ENST00000511426 NUP35Q8NFH5 326 aa11.38□□□□□ -0.59
SCLT1-209ENST00000511426 CITED1Q99966 193 aa11.38□□□□□ -0.59
SCLT1-209ENST00000511426 A0A1B0GW15 77 aa11.37□□□□□ -0.59
SCLT1-209ENST00000511426 CA1P00915 261 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms