RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 IGHV3-30P01768 117 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 IGHV3-33P01772 117 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 IGKV1D-39P04432 117 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 RLN1P04808 185 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 UCHL1P09936 223 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 OR5AC1P0C628 307 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 IGHV3-30-3P0DP02 117 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 IGHV3-30-5P0DP03 117 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 MYL12AP19105 171 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 GADD45AP24522 165 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 SRIP30626 198 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 RND2P52198 227 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 SUB1P53999 127 aaKnown RBP eCLIP3.63□□□□□ -1.83
USP53-206ENST00000510737 FXYD4P59646 89 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 RHOBP62745 196 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 SUPT4H1P63272 117 aaKnown RBP3.63□□□□□ -1.83
USP53-206ENST00000510737 PSG3Q16557 428 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 CNPY1Q3B7I2 92 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 C1orf194Q5T5A4 169 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 RNF182Q8N6D2 247 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 Q8N976 141 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 TMEM80Q96HE8 168 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 SEC22AQ96IW7 307 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 RSG1Q9BU20 258 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 MRPL32Q9BYC8 188 aaKnown RBP3.63□□□□□ -1.83
USP53-206ENST00000510737 RPH3ALQ9UNE2 315 aa3.63□□□□□ -1.83
USP53-206ENST00000510737 TRGV1A0A0A0MS02 117 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 SLAQ13239 276 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 BSXQ3C1V8 233 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 C2orf66Q6UXQ4 117 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 TMEM91Q6ZNR0 172 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 OR8I2Q8N0Y5 310 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 MS4A15Q8N5U1 240 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 C11orf72Q8NBR9 251 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 PBDC1Q9BVG4 233 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 PARD6GQ9BYG4 376 aaPredicted RBP3.62□□□□□ -1.83
USP53-206ENST00000510737 FAM107BQ9H098 131 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 KLK12Q9UKR0 248 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 KLF12Q9Y4X4 402 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 AP4S1Q9Y587 144 aa3.62□□□□□ -1.83
USP53-206ENST00000510737 LOC100130705A0A1B0GUX0 176 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 EFCAB10A6NFE3 127 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 EI24O14681 340 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 SPINK4O60575 86 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 PSMB9P28065 219 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 ARPC4P59998 168 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 HIST1H1AQ02539 215 aaPredicted RBP3.61□□□□□ -1.83
USP53-206ENST00000510737 ZNF90Q03938 601 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 FGL1Q08830 312 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 SAMD13Q5VXD3 122 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 OR8G2PQ6IF36 304 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 H2BFWTQ7Z2G1 175 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 TMEM17Q86X19 198 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 OR8A1Q8NGG7 326 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 CENPNQ96H22 339 aaPredicted RBP3.61□□□□□ -1.83
USP53-206ENST00000510737 C20orf144Q9BQM9 153 aa3.61□□□□□ -1.83
USP53-206ENST00000510737 LOC100131303A0A0U1RQF7 123 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 SLC25A4P12235 298 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 CALB2P22676 271 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 PSMA1P25786 263 aaKnown RBP3.6□□□□□ -1.83
USP53-206ENST00000510737 NUP62P37198 522 aaPredicted RBP3.6□□□□□ -1.83
USP53-206ENST00000510737 OR10A3P58181 314 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 RPS25P62851 125 aaKnown RBP3.6□□□□□ -1.83
USP53-206ENST00000510737 OR2F1Q13607 317 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 LAGE3Q14657 143 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 ARRDC1Q8N5I2 433 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 SLC35G3Q8N808 338 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 ZNF738Q8NE65 137 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 ACY3Q96HD9 319 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 SLC35E1Q96K37 410 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 DNAJC30Q96LL9 226 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 ATG5Q9H1Y0 275 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 V9GY05 133 aa3.6□□□□□ -1.83
USP53-206ENST00000510737 IGKV1D-37A0A075B6S9 117 aa3.59□□□□□ -1.83
USP53-206ENST00000510737 TRAV12-3A0A0B4J271 114 aa3.59□□□□□ -1.83
USP53-206ENST00000510737 IRGMA1A4Y4 181 aa3.59□□□□□ -1.83
USP53-206ENST00000510737 METTL21EPA6NDL7 271 aa3.59□□□□□ -1.83
USP53-206ENST00000510737 ZNF846Q147U1 533 aa3.59□□□□□ -1.83
USP53-206ENST00000510737 ARL6IP1Q15041 203 aa3.59□□□□□ -1.83
USP53-206ENST00000510737 TMEM182Q6ZP80 229 aaPredicted RBP3.59□□□□□ -1.83
USP53-206ENST00000510737 SDIM1Q6ZPB5 146 aa3.59□□□□□ -1.83
USP53-206ENST00000510737 IQCF2Q8IXL9 164 aa3.59□□□□□ -1.83
USP53-206ENST00000510737 ZNF431Q8TF32 576 aaPredicted RBP3.59□□□□□ -1.83
USP53-206ENST00000510737 MRGPRFQ96AM1 343 aa3.59□□□□□ -1.83
USP53-206ENST00000510737 VAX2Q9UIW0 290 aa3.59□□□□□ -1.83
USP53-206ENST00000510737 ORC6Q9Y5N6 252 aa3.59□□□□□ -1.83
USP53-206ENST00000510737 TRAV8-3A0A0A6YYJ7 113 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 TRAV8-6A0A0B4J262 113 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 TRGV4A0A0C4DH28 118 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 ERICH4A6NGS2 130 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 IGKV1-5P01602 117 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 SFTA3P0C7M3 94 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 CXCL3P19876 107 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 HTR2BP41595 481 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 GALR1P47211 349 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 GNG2P59768 71 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 PRR4Q16378 134 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 OR10J3Q5JRS4 329 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 DAZ4Q86SG3 579 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms