RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 ZNF705FA8MVS1 300 aaPredicted RBP7.06□□□□□ -1.28
HTT-205ENST00000509043 SOCS3O14543 225 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 HSBP1O75506 76 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 SCGB1D1O95968 90 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 OR5AL1P0C617 328 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 IGLC6P0CF74 106 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 ID1P41134 155 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 KRTAP10-9P60411 292 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 UNQ9165/PRO28630Q6UXU0 137 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 REC114Q7Z4M0 266 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 FER1L6-AS1Q8NA97 138 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 OR10J6PQ8NGY7 276 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 SSBP4Q9BWG4 385 aaPredicted RBP7.06□□□□□ -1.28
HTT-205ENST00000509043 AGPAT4-IT1Q9H0P7 198 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 SMPXQ9UHP9 88 aa7.06□□□□□ -1.28
HTT-205ENST00000509043 MED13LQ71F56 2210 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 IGHV3-66A0A0C4DH42 116 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 A0A1B0GUS0 222 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 J3QKU1 62 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 LGALS9O00182 355 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 ZNF207O43670 478 aaKnown RBP7.05□□□□□ -1.28
HTT-205ENST00000509043 TRBV12-3P01733 135 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 IGHV3-11P01762 117 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 LGALS1P09382 135 aaKnown RBP7.05□□□□□ -1.28
HTT-205ENST00000509043 ARMS2P0C7Q2 107 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 HLA-DMBP28068 263 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 LYZL1Q6UWQ5 148 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 IL17RELQ6ZVW7 336 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 Q6ZWC4 215 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 RNF182Q8N6D2 247 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 ZNF738Q8NE65 137 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 Q8TAT8 98 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 UBE2E2Q96LR5 201 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 RHPN1-AS1Q9BWJ2 59 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 LAMTOR2Q9Y2Q5 125 aa7.05□□□□□ -1.28
HTT-205ENST00000509043 PRAC2D3DTV9 90 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 SMAD7O15105 426 aaKnown RBP7.04□□□□□ -1.28
HTT-205ENST00000509043 ORM1P02763 201 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 PPBPP02775 128 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 ERCC8Q13216 396 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 SCGB2A2Q13296 93 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 TEX43Q6ZNM6 134 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 Q6ZS46 218 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 NIT1Q86X76 327 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 KRTAP1-3Q8IUG1 177 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 RCHY1Q96PM5 261 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 ZNF702PQ9H963 129 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 U3KQK5 164 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 COL12A1Q99715 3063 aa7.04□□□□□ -1.28
HTT-205ENST00000509043 PRRC2AP48634 2157 aaKnown RBP7.03□□□□□ -1.28
HTT-205ENST00000509043 IGHV3OR16-13A0A075B7E8 117 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 IGHV3-49A0A0A0MS15 119 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 IGHV3-74A0A0B4J1X5 117 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 LINC00587B1AMM8 73 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 M0R2Z0 102 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 HOXA3O43365 443 aaPredicted RBP7.03□□□□□ -1.28
HTT-205ENST00000509043 LINC00614P0C842 121 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 PLA2G2AP14555 144 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 DDTP30046 118 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 ZNF80P51504 273 aaPredicted RBP7.03□□□□□ -1.28
HTT-205ENST00000509043 CACNG7P62955 275 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 PMCHL1Q16048 86 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 FAM104BQ5XKR9 115 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 IGFL4Q6B9Z1 124 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 RNASEKQ6P5S7 137 aaKnown RBP7.03□□□□□ -1.28
HTT-205ENST00000509043 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 ORMDL3Q8N138 153 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 WFDC12Q8WWY7 111 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 TPPP3Q9BW30 176 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 TMEM191AQ9H0A3 160 aa7.03□□□□□ -1.28
HTT-205ENST00000509043 IGHV4-4A0A075B6R2 117 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 TRAV21A0A0B4J279 112 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 KIR2DL5BA0A0G2JN68 375 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 KIR2DL5BA0A0G2JPC4 375 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 M0QZ24 198 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 ZNF705DP0CH99 300 aaPredicted RBP7.02□□□□□ -1.29
HTT-205ENST00000509043 ZNF705BP0CI00 300 aaPredicted RBP7.02□□□□□ -1.29
HTT-205ENST00000509043 MED14OSP0DP75 135 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 CTAG1AP78358 180 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 DEFA6Q01524 100 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 CDPF1Q6NVV7 123 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 SMIM15Q7Z3B0 74 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 KIR2DL5AQ8N109 375 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 ZNF664Q8N3J9 261 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 MAPK1IP1LQ8NDC0 245 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 FAM19A4Q96LR4 140 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 ODF3Q96PU9 254 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 FOXC2Q99958 501 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 LRRK2Q5S007 2527 aa7.02□□□□□ -1.29
HTT-205ENST00000509043 SPG11Q96JI7 2443 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 ZFYVE26Q68DK2 2539 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 TMSB15BA0A087X1C1 80 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 C20orf202A1L168 122 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 FAM181BA6NEQ2 426 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 SNAI2O43623 268 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 NTF3P20783 257 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 KRTDAPP60985 99 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 RPL11P62913 178 aaKnown RBP7.01□□□□□ -1.29
HTT-205ENST00000509043 TWIST1Q15672 202 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 LBHQ53QV2 105 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms