RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 CARD19Q96LW7 228 aa0.69□□□□□ -2.3
GYPB-210ENST00000508841 ANKRD31Q8N7Z5 1873 aa0.69□□□□□ -2.3
GYPB-210ENST00000508841 ZDBF2Q9HCK1 2354 aa0.68□□□□□ -2.3
GYPB-210ENST00000508841 MAP1LC3B2A6NCE7 125 aa0.68□□□□□ -2.3
GYPB-210ENST00000508841 TECPR2O15040 1411 aa0.68□□□□□ -2.3
GYPB-210ENST00000508841 PRH1P02810 166 aa0.68□□□□□ -2.3
GYPB-210ENST00000508841 FABP2P12104 132 aa0.68□□□□□ -2.3
GYPB-210ENST00000508841 CRYBA4P53673 196 aa0.68□□□□□ -2.3
GYPB-210ENST00000508841 RPL37AP61513 92 aaKnown RBP0.68□□□□□ -2.3
GYPB-210ENST00000508841 ZCCHC23Q6ZST2 131 aa0.68□□□□□ -2.3
GYPB-210ENST00000508841 AP1S3Q96PC3 154 aa0.68□□□□□ -2.3
GYPB-210ENST00000508841 ASH1LQ9NR48 2969 aaKnown RBP0.68□□□□□ -2.3
GYPB-210ENST00000508841 NUP210Q8TEM1 1887 aaPredicted RBP0.67□□□□□ -2.3
GYPB-210ENST00000508841 BCL2P10415 239 aa0.67□□□□□ -2.3
GYPB-210ENST00000508841 KDELR1P24390 212 aa0.67□□□□□ -2.3
GYPB-210ENST00000508841 C6orf52Q5T4I8 152 aa0.67□□□□□ -2.3
GYPB-210ENST00000508841 CCL19Q99731 98 aa0.67□□□□□ -2.3
GYPB-210ENST00000508841 SMR3AQ99954 134 aa0.67□□□□□ -2.3
GYPB-210ENST00000508841 NEDD8Q15843 81 aa0.66□□□□□ -2.3
GYPB-210ENST00000508841 Q86TA4 180 aa0.66□□□□□ -2.3
GYPB-210ENST00000508841 OR5H6Q8NGV6 325 aa0.66□□□□□ -2.3
GYPB-210ENST00000508841 LIMD2Q9BT23 127 aa0.66□□□□□ -2.3
GYPB-210ENST00000508841 CCDC32Q9BV29 185 aa0.66□□□□□ -2.3
GYPB-210ENST00000508841 ATPIF1Q9UII2 106 aa0.66□□□□□ -2.3
GYPB-210ENST00000508841 SULT1C4O75897 302 aa0.65□□□□□ -2.31
GYPB-210ENST00000508841 TPT1P13693 172 aaKnown RBP0.65□□□□□ -2.31
GYPB-210ENST00000508841 SDC2P34741 201 aa0.65□□□□□ -2.31
GYPB-210ENST00000508841 TMEM78Q5T7P6 136 aa0.65□□□□□ -2.31
GYPB-210ENST00000508841 ANGPTL5Q86XS5 388 aa0.65□□□□□ -2.31
GYPB-210ENST00000508841 PLAC4Q8WY50 150 aa0.65□□□□□ -2.31
GYPB-210ENST00000508841 SAA1P0DJI8 122 aaPredicted RBP0.64□□□□□ -2.31
GYPB-210ENST00000508841 C10orf99Q6UWK7 81 aa0.64□□□□□ -2.31
GYPB-210ENST00000508841 IZUMO2Q6UXV1 221 aa0.64□□□□□ -2.31
GYPB-210ENST00000508841 PRELID3AQ96N28 172 aa0.64□□□□□ -2.31
GYPB-210ENST00000508841 CIB3Q96Q77 187 aaPredicted RBP0.64□□□□□ -2.31
GYPB-210ENST00000508841 TAF9BQ9HBM6 251 aa0.64□□□□□ -2.31
GYPB-210ENST00000508841 APCP25054 2843 aa0.64□□□□□ -2.31
GYPB-210ENST00000508841 USP24Q9UPU5 2620 aa0.63□□□□□ -2.31
GYPB-210ENST00000508841 C3orf85A0A1B0GTC6 90 aa0.63□□□□□ -2.31
GYPB-210ENST00000508841 GABARAPH6UMI1 98 aa0.63□□□□□ -2.31
GYPB-210ENST00000508841 FAM107AO95990 144 aa0.63□□□□□ -2.31
GYPB-210ENST00000508841 CAV3P56539 151 aa0.63□□□□□ -2.31
GYPB-210ENST00000508841 CCSMST1Q4G0I0 132 aa0.63□□□□□ -2.31
GYPB-210ENST00000508841 KIAA1549LQ6ZVL6 1849 aa0.63□□□□□ -2.31
GYPB-210ENST00000508841 TANC2Q9HCD6 1990 aa0.63□□□□□ -2.31
GYPB-210ENST00000508841 GYPBP06028 91 aa0.62□□□□□ -2.31
GYPB-210ENST00000508841 PCBD2Q9H0N5 130 aa0.62□□□□□ -2.31
GYPB-210ENST00000508841 E7EQ34 232 aa0.61□□□□□ -2.31
GYPB-210ENST00000508841 H7BYZ3 331 aa0.61□□□□□ -2.31
GYPB-210ENST00000508841 S100A11P31949 105 aa0.61□□□□□ -2.31
GYPB-210ENST00000508841 SRP9P49458 86 aaKnown RBP0.61□□□□□ -2.31
GYPB-210ENST00000508841 MAXP61244 160 aa0.61□□□□□ -2.31
GYPB-210ENST00000508841 STX12Q86Y82 276 aa0.61□□□□□ -2.31
GYPB-210ENST00000508841 TMEM229BQ8NBD8 167 aa0.61□□□□□ -2.31
GYPB-210ENST00000508841 LXNQ9BS40 222 aa0.61□□□□□ -2.31
GYPB-210ENST00000508841 FRAS1Q86XX4 4008 aa0.61□□□□□ -2.31
GYPB-210ENST00000508841 TRBV27A0A0K0K1C4 114 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 ARL5CA6NH57 179 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 BBIP1A8MTZ0 92 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 G0S2P27469 103 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 GNG10P50151 68 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 DNAJB13P59910 316 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 XAF1Q6GPH4 301 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 LINC00305Q7Z4B0 112 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 TCTEX1D1Q8N7M0 179 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 CLEC2BQ92478 149 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 LPAR5Q9H1C0 372 aa0.6□□□□□ -2.31
GYPB-210ENST00000508841 NAV3Q8IVL0 2385 aa0.59□□□□□ -2.31
GYPB-210ENST00000508841 RPS3P23396 243 aaKnown RBP eCLIP0.59□□□□□ -2.31
GYPB-210ENST00000508841 FAM103A1Q9BTL3 118 aaKnown RBP0.59□□□□□ -2.31
GYPB-210ENST00000508841 USP54Q70EL1 1684 aa0.59□□□□□ -2.32
GYPB-210ENST00000508841 DLC1Q96QB1 1528 aa0.59□□□□□ -2.32
GYPB-210ENST00000508841 BCORL1Q5H9F3 1711 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 ATG2AQ2TAZ0 1938 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 LOC107986453A0A1B0GWG9 222 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 A0A1W2PRE2 83 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 QRFPP83859 136 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 SPINK13Q1W4C9 94 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 C3orf62Q6ZUJ4 267 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 C19orf12Q9NSK7 152 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 MPC1Q9Y5U8 109 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 TCOF1Q13428 1488 aaKnown RBP0.58□□□□□ -2.32
GYPB-210ENST00000508841 KNTC1P50748 2209 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 ANK1P16157 1881 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 NINQ8N4C6 2090 aa0.58□□□□□ -2.32
GYPB-210ENST00000508841 A0A1W2PPB8 328 aa0.57□□□□□ -2.32
GYPB-210ENST00000508841 A0A1W2PRS3 328 aa0.57□□□□□ -2.32
GYPB-210ENST00000508841 KIR3DP1A8MWS1 328 aa0.57□□□□□ -2.32
GYPB-210ENST00000508841 LSM3P62310 102 aaKnown RBP0.57□□□□□ -2.32
GYPB-210ENST00000508841 SNRPD3P62318 126 aaKnown RBP0.57□□□□□ -2.32
GYPB-210ENST00000508841 PPP1R2P3Q6NXS1 205 aa0.57□□□□□ -2.32
GYPB-210ENST00000508841 LOC285556D6RIA3 1793 aa0.56□□□□□ -2.32
GYPB-210ENST00000508841 TRAV13-1A0A0B4J241 112 aa0.56□□□□□ -2.32
GYPB-210ENST00000508841 TRBV7-6A0A0J9YX20 115 aa0.56□□□□□ -2.32
GYPB-210ENST00000508841 PRORSD1PA6NEY8 169 aa0.56□□□□□ -2.32
GYPB-210ENST00000508841 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.56□□□□□ -2.32
GYPB-210ENST00000508841 V9GYQ6 96 aa0.56□□□□□ -2.32
GYPB-210ENST00000508841 CACNA1EQ15878 2313 aa0.55□□□□□ -2.32
GYPB-210ENST00000508841 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms