RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 HIST1H2BMQ99879 126 aa6.07□□□□□ -1.44
NR1I3-226ENST00000508740 TMEM160Q9NX00 188 aa6.07□□□□□ -1.44
NR1I3-226ENST00000508740 CLEC5AQ9NY25 188 aa6.07□□□□□ -1.44
NR1I3-226ENST00000508740 IGKV2-40A0A087WW87 121 aaPredicted RBP6.06□□□□□ -1.44
NR1I3-226ENST00000508740 IGHV7-4-1A0A0J9YVY3 117 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 IZUMO1RA6ND01 250 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 PRAC2D3DTV9 90 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 H3BS24 57 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 IGKV2D-40P01614 121 aaPredicted RBP6.06□□□□□ -1.44
NR1I3-226ENST00000508740 P01737 135 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 LGALS1P09382 135 aaKnown RBP6.06□□□□□ -1.44
NR1I3-226ENST00000508740 PRB4P10163 310 aaPredicted RBP6.06□□□□□ -1.44
NR1I3-226ENST00000508740 TCL1AP56279 114 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 NDUFA6P56556 154 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 RPL19P84098 196 aaKnown RBP6.06□□□□□ -1.44
NR1I3-226ENST00000508740 FABP9Q0Z7S8 132 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 TM4SF20Q53R12 229 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 ANKRD39Q53RE8 183 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 CT83Q5H943 113 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 SAPCD1Q5SSQ6 148 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 GBGT1Q8N5D6 347 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 TSKUQ8WUA8 353 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 MRPL53Q96EL3 112 aaKnown RBP6.06□□□□□ -1.44
NR1I3-226ENST00000508740 UBE2E2Q96LR5 201 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 VGLL1Q99990 258 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 RPP21Q9H633 154 aaKnown RBP6.06□□□□□ -1.44
NR1I3-226ENST00000508740 SMPXQ9UHP9 88 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 TRAPPC1Q9Y5R8 145 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 ANK2Q01484 3957 aa6.06□□□□□ -1.44
NR1I3-226ENST00000508740 RBAKDNA6NC62 111 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 DNAJC9-AS1A6NH13 148 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 A8MWL6 223 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 NPIPB6E9PJ23 425 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 UBE2CO00762 179 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 HOXA5P20719 270 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 CRIP1P50238 77 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 SCGB2A2Q13296 93 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 WDR73Q6P4I2 378 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 COX8CQ7Z4L0 72 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 RNF182Q8N6D2 247 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 NUP35Q8NFH5 326 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 OR4B1Q8NGF8 309 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 ZC2HC1AQ96GY0 325 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 C16orf92Q96LL3 132 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 PRR25Q96S07 402 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 NEU1Q99519 415 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 ASCL2Q99929 193 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 RHPN1-AS1Q9BWJ2 59 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 GNB1LQ9BYB4 327 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 ESM1Q9NQ30 184 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 DAZ1Q9NQZ3 744 aaKnown RBP6.05□□□□□ -1.44
NR1I3-226ENST00000508740 NAT8BQ9UHF3 227 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 UFC1Q9Y3C8 167 aa6.05□□□□□ -1.44
NR1I3-226ENST00000508740 FAM231BA6NCW3 169 aa6.04□□□□□ -1.44
NR1I3-226ENST00000508740 SPINK4O60575 86 aa6.04□□□□□ -1.44
NR1I3-226ENST00000508740 FRMD6-AS1P0C7T7 363 aa6.04□□□□□ -1.44
NR1I3-226ENST00000508740 CBLN1P23435 193 aa6.04□□□□□ -1.44
NR1I3-226ENST00000508740 ERCC8Q13216 396 aa6.04□□□□□ -1.44
NR1I3-226ENST00000508740 COX19Q49B96 90 aa6.04□□□□□ -1.44
NR1I3-226ENST00000508740 Q6ZSV7 163 aa6.04□□□□□ -1.44
NR1I3-226ENST00000508740 KLHDC1Q8N7A1 406 aa6.04□□□□□ -1.44
NR1I3-226ENST00000508740 C20orf173Q96LM9 149 aa6.04□□□□□ -1.44
NR1I3-226ENST00000508740 C8orf49Q96NF6 230 aa6.04□□□□□ -1.44
NR1I3-226ENST00000508740 GFRA4Q9GZZ7 299 aa6.04□□□□□ -1.44
NR1I3-226ENST00000508740 IGHV4OR15-8A0A075B7B6 117 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 A0A087WW49 117 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 TMEM213A2RRL7 107 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 HIGD1CA8MV81 97 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 SNURFLB1AK76 121 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 LGALS9O00182 355 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 SOCS3O14543 225 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 CT45A10P0DMU9 189 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 BMI1P35226 326 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 CDX1P47902 265 aaPredicted RBP6.03□□□□□ -1.44
NR1I3-226ENST00000508740 FOXA3P55318 350 aaPredicted RBP6.03□□□□□ -1.44
NR1I3-226ENST00000508740 RPL11P62913 178 aaKnown RBP6.03□□□□□ -1.44
NR1I3-226ENST00000508740 MRPL54Q6P161 138 aaKnown RBP6.03□□□□□ -1.44
NR1I3-226ENST00000508740 RASL11AQ6T310 242 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 TMEM136Q6ZRR5 245 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 TCF24Q7RTU0 167 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 OR2D3Q8NGH3 330 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 WIPF2Q8TF74 440 aaPredicted RBP6.03□□□□□ -1.44
NR1I3-226ENST00000508740 GTSF1Q8WW33 167 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 NDFIP1Q9BT67 221 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 AGPAT4-IT1Q9H0P7 198 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 NRN1Q9NPD7 142 aa6.03□□□□□ -1.44
NR1I3-226ENST00000508740 XKRY2A2RUG3 117 aa6.02□□□□□ -1.45
NR1I3-226ENST00000508740 SH2D1AO60880 128 aa6.02□□□□□ -1.45
NR1I3-226ENST00000508740 MT-ND6P03923 174 aa6.02□□□□□ -1.45
NR1I3-226ENST00000508740 RNASE1P07998 156 aaKnown RBP6.02□□□□□ -1.45
NR1I3-226ENST00000508740 EDN2P20800 178 aa6.02□□□□□ -1.45
NR1I3-226ENST00000508740 HOXD3P31249 432 aaPredicted RBP6.02□□□□□ -1.45
NR1I3-226ENST00000508740 AKR1D1P51857 326 aa6.02□□□□□ -1.45
NR1I3-226ENST00000508740 ZNF138P52744 262 aa6.02□□□□□ -1.45
NR1I3-226ENST00000508740 SYNJ2BPP57105 145 aa6.02□□□□□ -1.45
NR1I3-226ENST00000508740 SMUG1Q53HV7 270 aa6.02□□□□□ -1.45
NR1I3-226ENST00000508740 TCTEX1D4Q5JR98 221 aa6.02□□□□□ -1.45
NR1I3-226ENST00000508740 COA6Q5JTJ3 125 aaKnown RBP6.02□□□□□ -1.45
NR1I3-226ENST00000508740 FAM162BQ5T6X4 162 aa6.02□□□□□ -1.45
NR1I3-226ENST00000508740 RBPMS2Q6ZRY4 209 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms