RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 M6PRP20645 277 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 DAZ2Q13117 558 aaKnown RBP9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 OR5I1Q13606 314 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 CLINT1Q14677 625 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 ATP6V1FQ16864 119 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 LINC00299Q6ZSB3 139 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 C6orf223Q8N319 242 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 GNPNAT1Q96EK6 184 aaPredicted RBP9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 FAM19A4Q96LR4 140 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 PYGO2Q9BRQ0 406 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 PGPEP1Q9NXJ5 209 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 A0A0J9YY99 117 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 C7orf71A4D174 169 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 ERCC8Q13216 396 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 MZT2BQ6NZ67 158 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 Q6ZTI0 123 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 EXOC3-AS1Q8N2X6 119 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 C11orf72Q8NBR9 251 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 OR5C1Q8NGR4 320 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 THAP6Q8TBB0 222 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 RXFP4Q8TDU9 374 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 ZNF503Q96F45 646 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 SLC25A2Q9BXI2 301 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 KRTAP1-5Q9BYS1 174 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 TMPRSS5Q9H3S3 457 aa9.03□□□□□ -0.96
HMGCS1-205ENST00000508319 ZNF324O75467 553 aaPredicted RBP9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 SIX6O95475 246 aa9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 NHLH2Q02577 135 aa9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 CD300CQ08708 224 aa9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 BTN1A1Q13410 526 aa9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 BLNKQ8WV28 456 aa9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 FAM167A-AS1Q96KT0 104 aa9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 AGPAT4-IT1Q9H0P7 198 aa9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 GSN-AS1Q9NRJ2 163 aa9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 OR5AC2Q9NZP5 309 aa9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 PRELID1Q9Y255 219 aa9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 TIMM9Q9Y5J7 89 aa9.02□□□□□ -0.97
HMGCS1-205ENST00000508319 IGKV2-40A0A087WW87 121 aaPredicted RBP9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 H0YIZ8 118 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 H3BNG1 76 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 IGKV2D-40P01614 121 aaPredicted RBP9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 CRISP2P16562 243 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 PRR9Q5T870 116 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 C9orf47Q6ZRZ4 202 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 MIR17HGQ75NE6 70 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 ZNF680Q8NEM1 530 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 ENKURQ8TC29 256 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 S100ZQ8WXG8 99 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 LINC00467Q9BRT7 94 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 UPK3BQ9BT76 320 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 NMES1Q9C002 83 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 AAMDCQ9H7C9 122 aa9.01□□□□□ -0.97
HMGCS1-205ENST00000508319 E5RGE8 158 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 UPK1BO75841 260 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 ICAM4Q14773 271 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 ESRGQ1W209 222 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 ANXA2RQ3ZCQ2 193 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 LRRC37A5PQ49AS3 106 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 EIF4E3Q8N5X7 224 aaKnown RBP9□□□□□ -0.97
HMGCS1-205ENST00000508319 ZFAND2AQ8N6M9 145 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 LINC00477Q96M19 166 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 C18orf15Q96N68 181 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 VGLL1Q99990 258 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 Q9H3A6 140 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 Q9H8V8 135 aa9□□□□□ -0.97
HMGCS1-205ENST00000508319 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
HMGCS1-205ENST00000508319 RNASE4P34096 147 aaKnown RBP8.99□□□□□ -0.97
HMGCS1-205ENST00000508319 FAM122CQ6P4D5 195 aa8.99□□□□□ -0.97
HMGCS1-205ENST00000508319 FXYD5Q96DB9 178 aa8.99□□□□□ -0.97
HMGCS1-205ENST00000508319 PHYHIPLQ96FC7 376 aa8.99□□□□□ -0.97
HMGCS1-205ENST00000508319 VSIG2Q96IQ7 327 aa8.99□□□□□ -0.97
HMGCS1-205ENST00000508319 WDR61Q9GZS3 305 aaKnown RBP8.99□□□□□ -0.97
HMGCS1-205ENST00000508319 SLC25A31Q9H0C2 315 aa8.99□□□□□ -0.97
HMGCS1-205ENST00000508319 KCNIP2Q9NS61 270 aa8.99□□□□□ -0.97
HMGCS1-205ENST00000508319 MRPS16Q9Y3D3 137 aaKnown RBP8.99□□□□□ -0.97
HMGCS1-205ENST00000508319 DNAH5Q8TE73 4624 aa8.99□□□□□ -0.97
HMGCS1-205ENST00000508319 TRGV2A0A075B6R0 118 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 TRGV1A0A0A0MS02 117 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 C16orf90A8MZG2 172 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 GPX1P07203 203 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 NMBP08949 121 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 NBEAP1P0C6P0 100 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 TCL1AP56279 114 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 H2BFSP57053 126 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 IFITM3Q01628 133 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 TTC32Q5I0X7 151 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 TMEM78Q5T7P6 136 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 Q6ZQT7 251 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 Q8TAT8 98 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 ANAPC16Q96DE5 110 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 MRPL32Q9BYC8 188 aaKnown RBP8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 KRTAP4-5Q9BYR2 181 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 OR51M1Q9H341 326 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 ZNF492Q9P255 531 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 FUT9Q9Y231 359 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 KLF12Q9Y4X4 402 aa8.98□□□□□ -0.97
HMGCS1-205ENST00000508319 A0A096LPF7 62 aa8.97□□□□□ -0.97
HMGCS1-205ENST00000508319 SPINK4O60575 86 aa8.97□□□□□ -0.97
HMGCS1-205ENST00000508319 PRAF2O60831 178 aa8.97□□□□□ -0.97
HMGCS1-205ENST00000508319 OR10J4P0C629 311 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms