RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 TMEM189A5PLL7 270 aa17.07■□□□□ 0.32
SPCS3-203ENST00000507678 OVOL3O00110 214 aa17.07■□□□□ 0.32
SPCS3-203ENST00000507678 ERCC8Q13216 396 aa17.07■□□□□ 0.32
SPCS3-203ENST00000507678 RIGQ13278 110 aa17.07■□□□□ 0.32
SPCS3-203ENST00000507678 LYZL1Q6UWQ5 148 aa17.07■□□□□ 0.32
SPCS3-203ENST00000507678 SPATA12Q7Z6I5 190 aa17.07■□□□□ 0.32
SPCS3-203ENST00000507678 IGHV1-24A0A0C4DH33 117 aa17.06■□□□□ 0.32
SPCS3-203ENST00000507678 TMEM213A2RRL7 107 aa17.06■□□□□ 0.32
SPCS3-203ENST00000507678 LY6EQ16553 131 aa17.06■□□□□ 0.32
SPCS3-203ENST00000507678 CCL19Q99731 98 aa17.06■□□□□ 0.32
SPCS3-203ENST00000507678 MCRIP2Q9BUT9 160 aaKnown RBP17.06■□□□□ 0.32
SPCS3-203ENST00000507678 ZNF80P51504 273 aaPredicted RBP17.05■□□□□ 0.32
SPCS3-203ENST00000507678 C5orf56Q8N8D9 126 aa17.05■□□□□ 0.32
SPCS3-203ENST00000507678 PRR25Q96S07 402 aa17.05■□□□□ 0.32
SPCS3-203ENST00000507678 PRAC2D3DTV9 90 aa17.05■□□□□ 0.32
SPCS3-203ENST00000507678 IGHG4P01861 327 aa17.05■□□□□ 0.32
SPCS3-203ENST00000507678 IGLL1P15814 213 aa17.05■□□□□ 0.32
SPCS3-203ENST00000507678 FAM162BQ5T6X4 162 aa17.05■□□□□ 0.32
SPCS3-203ENST00000507678 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.04■□□□□ 0.323e-13■□□□□ 10.7
SPCS3-203ENST00000507678 C2orf70A6NJV1 201 aa17.04■□□□□ 0.32
SPCS3-203ENST00000507678 GOSR1O95249 250 aa17.04■□□□□ 0.32
SPCS3-203ENST00000507678 IGSF10Q6WRI0 2623 aa17.04■□□□□ 0.32
SPCS3-203ENST00000507678 MPV17L2Q567V2 206 aa17.04■□□□□ 0.32
SPCS3-203ENST00000507678 ZFAND3Q9H8U3 227 aa17.04■□□□□ 0.32
SPCS3-203ENST00000507678 USP9XQ93008 2570 aaPredicted RBP17.04■□□□□ 0.32
SPCS3-203ENST00000507678 CHTOPQ9Y3Y2 248 aaKnown RBP17.04■□□□□ 0.32
SPCS3-203ENST00000507678 ACACBO00763 2458 aa17.03■□□□□ 0.32
SPCS3-203ENST00000507678 NDFIP1Q9BT67 221 aa17.03■□□□□ 0.32
SPCS3-203ENST00000507678 LEPROTL1O95214 131 aa17.03■□□□□ 0.32
SPCS3-203ENST00000507678 IGHV4-38-2P0DP08 117 aa17.03■□□□□ 0.32
SPCS3-203ENST00000507678 RIPPLY3P57055 190 aa17.03■□□□□ 0.32
SPCS3-203ENST00000507678 LOC389332A0A1B0GUA5 103 aa17.02■□□□□ 0.32
SPCS3-203ENST00000507678 BUB3O43684 328 aa17.02■□□□□ 0.32
SPCS3-203ENST00000507678 AMMECR1LQ6DCA0 310 aa17.02■□□□□ 0.32
SPCS3-203ENST00000507678 PIMREGQ9BSJ6 248 aa17.02■□□□□ 0.32
SPCS3-203ENST00000507678 MYO18BQ8IUG5 2567 aa17.02■□□□□ 0.31
SPCS3-203ENST00000507678 TRAV9-2A0A087WT02 112 aa17.02■□□□□ 0.31
SPCS3-203ENST00000507678 TAX1BP3O14907 124 aa17.02■□□□□ 0.31
SPCS3-203ENST00000507678 ORM1P02763 201 aa17.02■□□□□ 0.31
SPCS3-203ENST00000507678 EEF1AKMT3Q96AZ1 226 aa17.02■□□□□ 0.31
SPCS3-203ENST00000507678 TMEM70Q9BUB7 260 aa17.02■□□□□ 0.31
SPCS3-203ENST00000507678 CACNA1AO00555 2505 aa17.01■□□□□ 0.31
SPCS3-203ENST00000507678 ATP5J2P56134 94 aa17.01■□□□□ 0.31
SPCS3-203ENST00000507678 AMN1Q8IY45 258 aa17.01■□□□□ 0.31
SPCS3-203ENST00000507678 IGHV1-69DA0A0B4J2H0 117 aa17.01■□□□□ 0.31
SPCS3-203ENST00000507678 CLPSL1A2RUU4 121 aa17.01■□□□□ 0.31
SPCS3-203ENST00000507678 IGHV1-69P01742 117 aa17.01■□□□□ 0.31
SPCS3-203ENST00000507678 CIDEAO60543 219 aa17■□□□□ 0.31
SPCS3-203ENST00000507678 NRGNQ92686 78 aa17■□□□□ 0.31
SPCS3-203ENST00000507678 PAX8Q06710 450 aa17■□□□□ 0.31
SPCS3-203ENST00000507678 CHCHD1Q96BP2 118 aaKnown RBP17■□□□□ 0.31
SPCS3-203ENST00000507678 MOB4Q9Y3A3 225 aa17■□□□□ 0.31
SPCS3-203ENST00000507678 IGHV4-30-2A0A087WSY4 118 aa16.99■□□□□ 0.31
SPCS3-203ENST00000507678 TRAV41A0A0B4J266 112 aa16.99■□□□□ 0.31
SPCS3-203ENST00000507678 ATP5G2Q06055 141 aa16.99■□□□□ 0.31
SPCS3-203ENST00000507678 PMCHL2Q9BQD1 86 aa16.99■□□□□ 0.31
SPCS3-203ENST00000507678 SELENOKQ9Y6D0 94 aa16.99■□□□□ 0.31
SPCS3-203ENST00000507678 ZFYVE26Q68DK2 2539 aa16.99■□□□□ 0.31
SPCS3-203ENST00000507678 PPIFP30405 207 aaKnown RBP16.99■□□□□ 0.31
SPCS3-203ENST00000507678 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.99■□□□□ 0.31
SPCS3-203ENST00000507678 PRSS3P2Q8NHM4 247 aa16.99■□□□□ 0.31
SPCS3-203ENST00000507678 MEGF9Q9H1U4 602 aa16.99■□□□□ 0.31
SPCS3-203ENST00000507678 D6R8Y8 96 aa16.98■□□□□ 0.31
SPCS3-203ENST00000507678 TRGV3P03979 118 aa16.98■□□□□ 0.31
SPCS3-203ENST00000507678 TWIST1Q15672 202 aa16.98■□□□□ 0.31
SPCS3-203ENST00000507678 PIFOQ8TCI5 191 aa16.98■□□□□ 0.31
SPCS3-203ENST00000507678 IL17RELQ6ZVW7 336 aa16.98■□□□□ 0.31
SPCS3-203ENST00000507678 CSPG4Q6UVK1 2322 aa16.98■□□□□ 0.31
SPCS3-203ENST00000507678 GAGE12BA1L429 117 aa16.97■□□□□ 0.31
SPCS3-203ENST00000507678 SAP30O75446 220 aa16.97■□□□□ 0.31
SPCS3-203ENST00000507678 NUDT3O95989 172 aa16.97■□□□□ 0.31
SPCS3-203ENST00000507678 FXYD7P58549 80 aa16.97■□□□□ 0.31
SPCS3-203ENST00000507678 FAM106AQ4KMX7 169 aa16.97■□□□□ 0.31
SPCS3-203ENST00000507678 METTL26Q96S19 204 aa16.97■□□□□ 0.31
SPCS3-203ENST00000507678 SMKR1H3BMG3 65 aa16.97■□□□□ 0.31
SPCS3-203ENST00000507678 K7ERU9 68 aa16.97■□□□□ 0.31
SPCS3-203ENST00000507678 Q6AWC8 147 aa16.97■□□□□ 0.31
SPCS3-203ENST00000507678 OR4C46A6NHA9 309 aa16.96■□□□□ 0.31
SPCS3-203ENST00000507678 TRBV12-3P01733 135 aa16.96■□□□□ 0.31
SPCS3-203ENST00000507678 IGHV3-11P01762 117 aa16.96■□□□□ 0.31
SPCS3-203ENST00000507678 LCNL1Q6ZST4 164 aa16.96■□□□□ 0.31
SPCS3-203ENST00000507678 SYS1-DBNDD2H3BUS1 97 aa16.96■□□□□ 0.31
SPCS3-203ENST00000507678 MSRB1Q9NZV6 116 aa16.96■□□□□ 0.31
SPCS3-203ENST00000507678 CENPEQ02224 2701 aa16.96■□□□□ 0.31
SPCS3-203ENST00000507678 HSBP1L1C9JCN9 74 aa16.95■□□□□ 0.3
SPCS3-203ENST00000507678 IFI27P40305 119 aaPredicted RBP16.95■□□□□ 0.3
SPCS3-203ENST00000507678 FA2HQ7L5A8 372 aa16.95■□□□□ 0.3
SPCS3-203ENST00000507678 FER1L6-AS1Q8NA97 138 aa16.95■□□□□ 0.3
SPCS3-203ENST00000507678 C10orf105Q8TEF2 133 aa16.95■□□□□ 0.3
SPCS3-203ENST00000507678 AP5S1Q9NUS5 200 aa16.95■□□□□ 0.3
SPCS3-203ENST00000507678 DOPEY1Q5JWR5 2465 aa16.95■□□□□ 0.3
SPCS3-203ENST00000507678 TRBV7-1A0A0A6YYK4 115 aa16.95■□□□□ 0.3
SPCS3-203ENST00000507678 H3BUX3 64 aa16.95■□□□□ 0.3
SPCS3-203ENST00000507678 hDV102S1A0JD36 115 aa16.94■□□□□ 0.3
SPCS3-203ENST00000507678 NCR2O95944 276 aa16.94■□□□□ 0.3
SPCS3-203ENST00000507678 TMEM190Q8WZ59 177 aa16.94■□□□□ 0.3
SPCS3-203ENST00000507678 BMI1P35226 326 aa16.94■□□□□ 0.3
SPCS3-203ENST00000507678 RPS20P60866 119 aaKnown RBP16.94■□□□□ 0.3
SPCS3-203ENST00000507678 LOXL1Q08397 574 aaPredicted RBP16.93■□□□□ 0.3
SPCS3-203ENST00000507678 POLQO75417 2590 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms