RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 TAF9BQ9HBM6 251 aa2.99□□□□□ -1.93
CLDND1-212ENST00000506885 NRXN2Q9P2S2 1712 aa2.99□□□□□ -1.93
CLDND1-212ENST00000506885 AFDNP55196 1824 aaKnown RBP2.98□□□□□ -1.93
CLDND1-212ENST00000506885 NOTCH2Q04721 2471 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 RGPD2P0DJD1 1756 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 PAPPA2Q9BXP8 1791 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 SCN11AQ9UI33 1791 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 ZNF727A8MUV8 499 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 A8MWV9 139 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 GNRH2O43555 120 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 TCRAP04437 139 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 RBP2P50120 134 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 EBI3Q14213 229 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 SPINT4Q6UDR6 99 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 GLIPR1L1Q6UWM5 242 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 LYZL1Q6UWQ5 148 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 C7orf65Q6ZTY9 151 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 SCRT1Q9BWW7 348 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 NIT2Q9NQR4 276 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 MINOS1-NBL1R4GNA1 71 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 NYNRINQ9P2P1 1898 aaKnown RBP2.98□□□□□ -1.93
CLDND1-212ENST00000506885 SLX4Q8IY92 1834 aa2.98□□□□□ -1.93
CLDND1-212ENST00000506885 BCORQ6W2J9 1755 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 SZT2Q5T011 3432 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 OR2T8A6NH00 312 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 ZNF670-ZNF695F2Z2N8 137 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 H7C2G1 150 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 SLC25A5P05141 298 aaKnown RBP2.97□□□□□ -1.93
CLDND1-212ENST00000506885 DEFA4P12838 97 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 AKR1D1P51857 326 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 FXYD2P54710 66 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 DIAPH2-AS1Q14236 149 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 PATE2Q6UY27 113 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 TCTEX1D1Q8N7M0 179 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 MORN4Q8NDC4 146 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 AQP3Q92482 292 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 MCEEQ96PE7 176 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 PRO3102Q9H379 93 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 COL6A3P12111 3177 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 LCTP09848 1927 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 PTPRSQ13332 1948 aa2.97□□□□□ -1.93
CLDND1-212ENST00000506885 RBBP6Q7Z6E9 1792 aaKnown RBP2.97□□□□□ -1.93
CLDND1-212ENST00000506885 CEP290O15078 2479 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 TCHHQ07283 1943 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 IGLV3-16A0A075B6K0 115 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 IGLV3-9A0A075B6K5 115 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 TRBV10-2A0A0K0K1G8 114 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 CORTO00230 105 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 SDCBPO00560 298 aaPredicted RBP2.96□□□□□ -1.94
CLDND1-212ENST00000506885 UQCRQO14949 82 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 COX6A1P12074 109 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 ZNF14P17017 642 aaPredicted RBP2.96□□□□□ -1.94
CLDND1-212ENST00000506885 FUSP35637 526 aaKnown RBP eCLIP2.96□□□□□ -1.94
CLDND1-212ENST00000506885 TMEM155Q4W5P6 130 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 TMEM136Q6ZRR5 245 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 Q6ZS52 159 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 OR4B1Q8NGF8 309 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 DIRC1Q969H9 104 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 NAA38Q9BRA0 125 aaKnown RBP2.96□□□□□ -1.94
CLDND1-212ENST00000506885 BCL2L10Q9HD36 194 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 ARFGEF2Q9Y6D5 1785 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 CACNA1AO00555 2505 aa2.96□□□□□ -1.94
CLDND1-212ENST00000506885 ZNF609O15014 1411 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 TRAV27A0A087WT01 109 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 FAM236AA0A1B0GUQ0 79 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 FAM236BA0A1B0GV22 79 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 C20orf202A1L168 122 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 ZNF705BP0CI00 300 aaPredicted RBP2.95□□□□□ -1.94
CLDND1-212ENST00000506885 CRYGAP11844 174 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 GUCA1AP43080 201 aaPredicted RBP2.95□□□□□ -1.94
CLDND1-212ENST00000506885 ZNF181Q2M3W8 571 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 PABPC1L2AQ5JQF8 200 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 FAM27BQ5VT28 67 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 C3orf62Q6ZUJ4 267 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 SLC35E3Q7Z769 313 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 WFDC11Q8NEX6 87 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 OR10AC1Q8NH08 325 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 DEDD2Q8WXF8 326 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 MRPS24Q96EL2 167 aaKnown RBP2.95□□□□□ -1.94
CLDND1-212ENST00000506885 DUSP21Q9H596 190 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 NHP2Q9NX24 153 aaKnown RBP2.95□□□□□ -1.94
CLDND1-212ENST00000506885 TP53TG3Q9ULZ0 132 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 SOX21Q9Y651 276 aaPredicted RBP2.95□□□□□ -1.94
CLDND1-212ENST00000506885 NUP98P52948 1817 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 MRC1P22897 1456 aa2.95□□□□□ -1.94
CLDND1-212ENST00000506885 KIAA0100Q14667 2235 aaKnown RBP2.95□□□□□ -1.94
CLDND1-212ENST00000506885 RIC1Q4ADV7 1423 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 TJP1Q07157 1748 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 FANCMQ8IYD8 2048 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 TRAV40A0A0B4J280 105 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 H3BQF6 201 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 TIMM17BO60830 172 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 HBDP02042 147 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 APODP05090 189 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 HLA-DRB4P13762 266 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 KLRD1Q13241 179 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 LCN15Q6UWW0 184 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 RNF182Q8N6D2 247 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 FAM216BQ8N7L0 139 aa2.94□□□□□ -1.94
CLDND1-212ENST00000506885 PPP3R2Q96LZ3 170 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms