RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 K7ERU9 68 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 PPIFP30405 207 aaKnown RBP9.23□□□□□ -0.93
UBE3D-206ENST00000505226 NPBQ8NG41 125 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 PRAC2D3DTV9 90 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 EVI2AP22794 236 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 ERCC8Q13216 396 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 DYNAPQ8N1N2 210 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 OR9G4Q8NGQ1 327 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 TLN1Q9Y490 2541 aaKnown RBP9.23□□□□□ -0.93
UBE3D-206ENST00000505226 B9A039 149 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 MFAP4P55083 255 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 C5orf64Q2M2E5 130 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 LY6G5BQ8NDX9 201 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 LINC01560Q8TB33 94 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 RAB1BQ9H0U4 201 aa9.23□□□□□ -0.93
UBE3D-206ENST00000505226 SIVA1O15304 175 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 CTSGP08311 255 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 HES1Q14469 280 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 OR2K2Q8NGT1 345 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 DPM3Q9P2X0 92 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 GRNP28799 593 aaKnown RBP9.22□□□□□ -0.93
UBE3D-206ENST00000505226 ODF1Q14990 250 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 ZNF562Q6V9R5 426 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 SMIM15Q7Z3B0 74 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 TMEM190Q8WZ59 177 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 C21orf62Q9NYP8 219 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 CACNA1BQ00975 2339 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 K7EMI3 77 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 LEPP41159 167 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 FXYD2P54710 66 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 ZNF672Q499Z4 452 aaPredicted RBP9.22□□□□□ -0.93
UBE3D-206ENST00000505226 GTF2H5Q6ZYL4 71 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 ZMAT4Q9H898 229 aa9.22□□□□□ -0.93
UBE3D-206ENST00000505226 A0A1W2PPM0 123 aa9.21□□□□□ -0.93
UBE3D-206ENST00000505226 G3V4G9 280 aa9.21□□□□□ -0.93
UBE3D-206ENST00000505226 ORM1P02763 201 aa9.21□□□□□ -0.93
UBE3D-206ENST00000505226 NEGR1Q7Z3B1 354 aa9.21□□□□□ -0.93
UBE3D-206ENST00000505226 OR11H6Q8NGC7 330 aa9.21□□□□□ -0.93
UBE3D-206ENST00000505226 OR4X2Q8NGF9 303 aa9.21□□□□□ -0.93
UBE3D-206ENST00000505226 AP1S3Q96PC3 154 aa9.21□□□□□ -0.93
UBE3D-206ENST00000505226 CELSR1Q9NYQ6 3014 aa9.21□□□□□ -0.94
UBE3D-206ENST00000505226 MED13LQ71F56 2210 aa9.21□□□□□ -0.94
UBE3D-206ENST00000505226 ANKHD1Q8IWZ3 2542 aaKnown RBP9.21□□□□□ -0.94
UBE3D-206ENST00000505226 LINC01546A6NGU7 62 aa9.21□□□□□ -0.94
UBE3D-206ENST00000505226 RNF182Q8N6D2 247 aa9.2□□□□□ -0.94
UBE3D-206ENST00000505226 ARPC1AQ92747 370 aa9.2□□□□□ -0.94
UBE3D-206ENST00000505226 ZNF48Q96MX3 618 aaPredicted RBP9.2□□□□□ -0.94
UBE3D-206ENST00000505226 K7ERJ3 54 aa9.2□□□□□ -0.94
UBE3D-206ENST00000505226 TNFRSF6BO95407 300 aa9.2□□□□□ -0.94
UBE3D-206ENST00000505226 CD3EP07766 207 aa9.2□□□□□ -0.94
UBE3D-206ENST00000505226 RPL7P18124 248 aaKnown RBP9.2□□□□□ -0.94
UBE3D-206ENST00000505226 Q6ZQT7 251 aa9.2□□□□□ -0.94
UBE3D-206ENST00000505226 TTC9CQ8N5M4 171 aa9.2□□□□□ -0.94
UBE3D-206ENST00000505226 CNFNQ9BYD5 112 aa9.2□□□□□ -0.94
UBE3D-206ENST00000505226 C11orf21Q9P2W6 132 aa9.2□□□□□ -0.94
UBE3D-206ENST00000505226 NPFFR1Q9GZQ6 430 aa9.2□□□□□ -0.94
UBE3D-206ENST00000505226 SPCS1Q9Y6A9 102 aa9.2□□□□□ -0.94
UBE3D-206ENST00000505226 CEP295Q9C0D2 2601 aa9.19□□□□□ -0.94
UBE3D-206ENST00000505226 NCBP2LA6PVI3 153 aaKnown RBP9.19□□□□□ -0.94
UBE3D-206ENST00000505226 ODF3BA8MYP8 253 aa9.19□□□□□ -0.94
UBE3D-206ENST00000505226 FCER1GP30273 86 aa9.19□□□□□ -0.94
UBE3D-206ENST00000505226 BMI1P35226 326 aa9.19□□□□□ -0.94
UBE3D-206ENST00000505226 MAP1LC3AQ9H492 121 aa9.19□□□□□ -0.94
UBE3D-206ENST00000505226 TRGV3P03979 118 aa9.18□□□□□ -0.94
UBE3D-206ENST00000505226 IL17RELQ6ZVW7 336 aa9.18□□□□□ -0.94
UBE3D-206ENST00000505226 GTSCR1Q86UQ5 136 aa9.18□□□□□ -0.94
UBE3D-206ENST00000505226 DTX2Q86UW9 622 aa9.18□□□□□ -0.94
UBE3D-206ENST00000505226 IGLV2-18A0A075B6J9 118 aa9.18□□□□□ -0.94
UBE3D-206ENST00000505226 IGKV3D-20A0A0C4DH25 116 aa9.18□□□□□ -0.94
UBE3D-206ENST00000505226 IGHV3-66A0A0C4DH42 116 aa9.18□□□□□ -0.94
UBE3D-206ENST00000505226 GCSHP23434 173 aa9.18□□□□□ -0.94
UBE3D-206ENST00000505226 TMEM158Q8WZ71 300 aa9.18□□□□□ -0.94
UBE3D-206ENST00000505226 COL25A1Q9BXS0 654 aaPredicted RBP9.18□□□□□ -0.94
UBE3D-206ENST00000505226 VPS13CQ709C8 3753 aa9.18□□□□□ -0.94
UBE3D-206ENST00000505226 PIFOQ8TCI5 191 aa9.18□□□□□ -0.94
UBE3D-206ENST00000505226 PHLDA1Q8WV24 401 aaPredicted RBP9.18□□□□□ -0.94
UBE3D-206ENST00000505226 FABP5P3A8MUU1 101 aa9.17□□□□□ -0.94
UBE3D-206ENST00000505226 PRSS1P07477 247 aa9.17□□□□□ -0.94
UBE3D-206ENST00000505226 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
UBE3D-206ENST00000505226 TRAV26-2A0A0B4J265 109 aa9.17□□□□□ -0.94
UBE3D-206ENST00000505226 FBLL1A6NHQ2 334 aaKnown RBP9.17□□□□□ -0.94
UBE3D-206ENST00000505226 MAPKAPK5-AS1Q8N8E1 139 aa9.17□□□□□ -0.94
UBE3D-206ENST00000505226 FOXC2Q99958 501 aa9.17□□□□□ -0.94
UBE3D-206ENST00000505226 TRBV25-1A0A075B6N4 114 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 IGHV3OR16-13A0A075B7E8 117 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 IGHV3-74A0A0B4J1X5 117 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 Q8N6K4 173 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 CHAC1Q9BUX1 264 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 IGHV7-81A0A0B4J1V7 117 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 TMEM8BA6NDV4 472 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 LINC01559Q495D7 138 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 S100A7AQ86SG5 101 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 IGKCP01834 107 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 SMIM13P0DJ93 91 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 SRSF2Q01130 221 aaKnown RBP9.16□□□□□ -0.94
UBE3D-206ENST00000505226 CDSNQ15517 529 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 ZC2HC1BQ5TFG8 222 aa9.16□□□□□ -0.94
UBE3D-206ENST00000505226 NBASA2RRP1 2371 aa9.15□□□□□ -0.94
UBE3D-206ENST00000505226 TRAV40A0A0B4J280 105 aa9.15□□□□□ -0.94
UBE3D-206ENST00000505226 PRTN3P24158 256 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms