RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 GHRHP01286 108 aa7.93□□□□□ -1.14
LSM6-204ENST00000504181 GATA1P15976 413 aaPredicted RBP7.93□□□□□ -1.14
LSM6-204ENST00000504181 SMCO1Q147U7 214 aa7.93□□□□□ -1.14
LSM6-204ENST00000504181 VWC2Q2TAL6 325 aa7.93□□□□□ -1.14
LSM6-204ENST00000504181 SCGB2B2Q4G0G5 96 aa7.93□□□□□ -1.14
LSM6-204ENST00000504181 RNASE10Q5GAN6 216 aaKnown RBP7.93□□□□□ -1.14
LSM6-204ENST00000504181 RASL10AQ92737 203 aa7.93□□□□□ -1.14
LSM6-204ENST00000504181 ARL6Q9H0F7 186 aa7.93□□□□□ -1.14
LSM6-204ENST00000504181 GTSF1LQ9H1H1 148 aa7.93□□□□□ -1.14
LSM6-204ENST00000504181 PXMP4Q9Y6I8 212 aa7.93□□□□□ -1.14
LSM6-204ENST00000504181 PITX3O75364 302 aa7.92□□□□□ -1.14
LSM6-204ENST00000504181 CCR6P51684 374 aa7.92□□□□□ -1.14
LSM6-204ENST00000504181 PLP1P60201 277 aa7.92□□□□□ -1.14
LSM6-204ENST00000504181 PATE2Q6UY27 113 aa7.92□□□□□ -1.14
LSM6-204ENST00000504181 OR4D10Q8NGI6 311 aa7.92□□□□□ -1.14
LSM6-204ENST00000504181 ZC2HC1AQ96GY0 325 aa7.92□□□□□ -1.14
LSM6-204ENST00000504181 FAM19A4Q96LR4 140 aa7.92□□□□□ -1.14
LSM6-204ENST00000504181 LINC00477Q96M19 166 aa7.92□□□□□ -1.14
LSM6-204ENST00000504181 ARV1Q9H2C2 271 aa7.92□□□□□ -1.14
LSM6-204ENST00000504181 SMCO3A2RU48 225 aa7.91□□□□□ -1.14
LSM6-204ENST00000504181 CD3DP04234 171 aa7.91□□□□□ -1.14
LSM6-204ENST00000504181 H2AFB1P0C5Y9 115 aa7.91□□□□□ -1.14
LSM6-204ENST00000504181 H2AFB2P0C5Z0 115 aa7.91□□□□□ -1.14
LSM6-204ENST00000504181 MUC21Q5SSG8 566 aa7.91□□□□□ -1.14
LSM6-204ENST00000504181 REG3GQ6UW15 175 aa7.91□□□□□ -1.14
LSM6-204ENST00000504181 S100A7AQ86SG5 101 aa7.91□□□□□ -1.14
LSM6-204ENST00000504181 C9orf163Q8N9P6 203 aa7.91□□□□□ -1.14
LSM6-204ENST00000504181 SSBP4Q9BWG4 385 aaPredicted RBP7.91□□□□□ -1.14
LSM6-204ENST00000504181 C14orf166Q9Y224 244 aaKnown RBP7.91□□□□□ -1.14
LSM6-204ENST00000504181 LOC100506127A0A0U1RQW1 187 aa7.9□□□□□ -1.14
LSM6-204ENST00000504181 AKR1C4P17516 323 aa7.9□□□□□ -1.14
LSM6-204ENST00000504181 BPIFA4PQ86YQ2 179 aa7.9□□□□□ -1.14
LSM6-204ENST00000504181 SLC25A29Q8N8R3 303 aa7.9□□□□□ -1.14
LSM6-204ENST00000504181 TERB2Q8NHR7 220 aa7.9□□□□□ -1.14
LSM6-204ENST00000504181 SAT2Q96F10 170 aaPredicted RBP7.9□□□□□ -1.14
LSM6-204ENST00000504181 RTBDNQ9BSG5 229 aaPredicted RBP7.9□□□□□ -1.14
LSM6-204ENST00000504181 VCXQ9H320 206 aa7.9□□□□□ -1.14
LSM6-204ENST00000504181 H3BQ15 152 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 M0R3E3 92 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 OR10J4P0C629 311 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 CRISP2P16562 243 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 LINC00305Q7Z4B0 112 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 ZFAND2AQ8N6M9 145 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 DPH3Q96FX2 82 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 PRADC1Q9BSG0 188 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 SPXQ9BT56 116 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 SRRQ9GZT4 340 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 AGPAT4-IT1Q9H0P7 198 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 KLK12Q9UKR0 248 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 RNF24Q9Y225 148 aa7.89□□□□□ -1.15
LSM6-204ENST00000504181 IGLC2P0DOY2 106 aa7.88□□□□□ -1.15
LSM6-204ENST00000504181 TMEM183BQ1AE95 376 aa7.88□□□□□ -1.15
LSM6-204ENST00000504181 SDIM1Q6ZPB5 146 aa7.88□□□□□ -1.15
LSM6-204ENST00000504181 LYZL2Q7Z4W2 148 aa7.88□□□□□ -1.15
LSM6-204ENST00000504181 TMEM183AQ8IXX5 376 aa7.88□□□□□ -1.15
LSM6-204ENST00000504181 UBE2WQ96B02 151 aa7.88□□□□□ -1.15
LSM6-204ENST00000504181 C2orf50Q96LR7 162 aa7.88□□□□□ -1.15
LSM6-204ENST00000504181 A0A087WYN8 130 aa7.87□□□□□ -1.15
LSM6-204ENST00000504181 PRSS1P07477 247 aa7.87□□□□□ -1.15
LSM6-204ENST00000504181 PRR3P79522 188 aaKnown RBP7.87□□□□□ -1.15
LSM6-204ENST00000504181 CIRBPQ14011 172 aaKnown RBP7.87□□□□□ -1.15
LSM6-204ENST00000504181 RHOHQ15669 191 aa7.87□□□□□ -1.15
LSM6-204ENST00000504181 DPPA3Q6W0C5 159 aa7.87□□□□□ -1.15
LSM6-204ENST00000504181 C7orf33Q8WU49 177 aa7.87□□□□□ -1.15
LSM6-204ENST00000504181 OR51M1Q9H341 326 aa7.87□□□□□ -1.15
LSM6-204ENST00000504181 FBLL1A6NHQ2 334 aaKnown RBP7.86□□□□□ -1.15
LSM6-204ENST00000504181 USP17L23D6RBM5 183 aa7.86□□□□□ -1.15
LSM6-204ENST00000504181 H3BP45 60 aa7.86□□□□□ -1.15
LSM6-204ENST00000504181 WRBO00258 174 aa7.86□□□□□ -1.15
LSM6-204ENST00000504181 TMEM127O75204 238 aa7.86□□□□□ -1.15
LSM6-204ENST00000504181 CHTF8P0CG12 524 aa7.86□□□□□ -1.15
LSM6-204ENST00000504181 AQP4P55087 323 aa7.86□□□□□ -1.15
LSM6-204ENST00000504181 SELENOTP62341 195 aa7.86□□□□□ -1.15
LSM6-204ENST00000504181 DGAT2L7PQ6IED9 249 aa7.86□□□□□ -1.15
LSM6-204ENST00000504181 URGCP-MRPS24S4R325 110 aa7.86□□□□□ -1.15
LSM6-204ENST00000504181 IGHV3-73A0A0B4J1V6 119 aa7.85□□□□□ -1.15
LSM6-204ENST00000504181 A0A0B4J2A0 478 aa7.85□□□□□ -1.15
LSM6-204ENST00000504181 SMIM31A0A1B0GVY4 71 aa7.85□□□□□ -1.15
LSM6-204ENST00000504181 NMBP08949 121 aa7.85□□□□□ -1.15
LSM6-204ENST00000504181 TGFBR1P36897 503 aa7.85□□□□□ -1.15
LSM6-204ENST00000504181 UBE2MP61081 183 aaKnown RBP7.85□□□□□ -1.15
LSM6-204ENST00000504181 RPP30P78346 268 aaKnown RBP7.85□□□□□ -1.15
LSM6-204ENST00000504181 BAK1Q16611 211 aa7.85□□□□□ -1.15
LSM6-204ENST00000504181 SPANXN5Q5MJ07 72 aa7.85□□□□□ -1.15
LSM6-204ENST00000504181 ATRAIDQ6UW56 229 aa7.85□□□□□ -1.15
LSM6-204ENST00000504181 NIT1Q86X76 327 aa7.85□□□□□ -1.15
LSM6-204ENST00000504181 MRPL18Q9H0U6 180 aaKnown RBP7.85□□□□□ -1.15
LSM6-204ENST00000504181 SHPKQ9UHJ6 478 aa7.85□□□□□ -1.15
LSM6-204ENST00000504181 BLOC1S6Q9UL45 172 aa7.85□□□□□ -1.15
LSM6-204ENST00000504181 TRGV11A0A075B6L2 103 aa7.84□□□□□ -1.15
LSM6-204ENST00000504181 IGKV2-40A0A087WW87 121 aaPredicted RBP7.84□□□□□ -1.15
LSM6-204ENST00000504181 TRBV6-4A0A1B0GX49 114 aa7.84□□□□□ -1.15
LSM6-204ENST00000504181 SCO2A0A1W2PP80 73 aa7.84□□□□□ -1.15
LSM6-204ENST00000504181 C5orf51A6NDU8 294 aa7.84□□□□□ -1.15
LSM6-204ENST00000504181 M0R2P5 195 aa7.84□□□□□ -1.15
LSM6-204ENST00000504181 IGKV2D-40P01614 121 aaPredicted RBP7.84□□□□□ -1.15
LSM6-204ENST00000504181 HLA-DQA1P01909 254 aa7.84□□□□□ -1.15
LSM6-204ENST00000504181 POLR2GP62487 172 aaKnown RBP eCLIP7.84□□□□□ -1.15
LSM6-204ENST00000504181 C4orf46Q504U0 113 aa7.84□□□□□ -1.15
LSM6-204ENST00000504181 TMEM78Q5T7P6 136 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms