RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 G3V318 75 aa9.27□□□□□ -0.93
NUP54-202ENST00000502850 LEPROTL1O95214 131 aa9.27□□□□□ -0.93
NUP54-202ENST00000502850 IGF1P05019 195 aa9.27□□□□□ -0.93
NUP54-202ENST00000502850 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.27□□□□□ -0.93
NUP54-202ENST00000502850 LINC00469Q8N7U9 141 aa9.27□□□□□ -0.93
NUP54-202ENST00000502850 ASCL2Q99929 193 aa9.27□□□□□ -0.93
NUP54-202ENST00000502850 IGHV1-24A0A0C4DH33 117 aa9.26□□□□□ -0.93
NUP54-202ENST00000502850 FABP5P3A8MUU1 101 aa9.26□□□□□ -0.93
NUP54-202ENST00000502850 CRXO43186 299 aaPredicted RBP9.26□□□□□ -0.93
NUP54-202ENST00000502850 MSMBP08118 114 aa9.26□□□□□ -0.93
NUP54-202ENST00000502850 KRTAP10-9P60411 292 aa9.26□□□□□ -0.93
NUP54-202ENST00000502850 URB1-AS1Q96HZ7 61 aa9.26□□□□□ -0.93
NUP54-202ENST00000502850 USMG5Q96IX5 58 aa9.26□□□□□ -0.93
NUP54-202ENST00000502850 TPPP3Q9BW30 176 aa9.26□□□□□ -0.93
NUP54-202ENST00000502850 U3KQE9 123 aa9.26□□□□□ -0.93
NUP54-202ENST00000502850 TRAV9-2A0A087WT02 112 aa9.25□□□□□ -0.93
NUP54-202ENST00000502850 CLPSL1A2RUU4 121 aa9.25□□□□□ -0.93
NUP54-202ENST00000502850 C2orf70A6NJV1 201 aa9.25□□□□□ -0.93
NUP54-202ENST00000502850 TRGV3P03979 118 aa9.25□□□□□ -0.93
NUP54-202ENST00000502850 HIST1H1AQ02539 215 aaPredicted RBP9.25□□□□□ -0.93
NUP54-202ENST00000502850 LYZL1Q6UWQ5 148 aa9.25□□□□□ -0.93
NUP54-202ENST00000502850 FA2HQ7L5A8 372 aa9.25□□□□□ -0.93
NUP54-202ENST00000502850 FER1L6-AS1Q8NA97 138 aa9.25□□□□□ -0.93
NUP54-202ENST00000502850 SNHG12Q9BXW3 62 aa9.25□□□□□ -0.93
NUP54-202ENST00000502850 MAP1LC3CQ9BXW4 147 aa9.25□□□□□ -0.93
NUP54-202ENST00000502850 AP5S1Q9NUS5 200 aa9.25□□□□□ -0.93
NUP54-202ENST00000502850 A0A1B0GV90 55 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 EREGO14944 169 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 IGHG4P01861 327 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 TDRG1Q3Y452 100 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 TMEM78Q5T7P6 136 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 EBLN2Q6P2I7 272 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 PET117Q6UWS5 81 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 C9orf139Q6ZV77 190 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 TMEM219Q86XT9 240 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 ORMDL3Q8N138 153 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 VGLL1Q99990 258 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 TMEM191AQ9H0A3 160 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 ZNF580Q9UK33 172 aa9.24□□□□□ -0.93
NUP54-202ENST00000502850 IGHV3-35A0A0C4DH35 117 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 A6NDX4 124 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 B4DSR2 109 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 NDUFA4O00483 81 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 IGHG2P01859 326 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 IGLC6P0CF74 106 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 SLC25A16P16260 332 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 ARL3P36405 182 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 NUTF2P61970 127 aaKnown RBP9.23□□□□□ -0.93
NUP54-202ENST00000502850 LINC01559Q495D7 138 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 FAM104BQ5XKR9 115 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 Q8TAT8 98 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 PIFOQ8TCI5 191 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 CNFNQ9BYD5 112 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 PPP1R14DQ9NXH3 145 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 LENEPQ9Y5L5 61 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 U3KQK5 164 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 TACC2O95359 2948 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 A0A0G2JLM5 398 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 LINC01548A6NM66 108 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 SYS1-DBNDD2H3BUS1 97 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 PPBPP02775 128 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 IGLC3P0DOY3 106 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 ZNF138P52744 262 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 BRD3OSQ6XYD6 125 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 C8orf86Q6ZUL3 223 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 Q71RC1 249 aaPredicted RBP9.23□□□□□ -0.93
NUP54-202ENST00000502850 OR10AG1Q8NH19 301 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 PRSS3P2Q8NHM4 247 aa9.23□□□□□ -0.93
NUP54-202ENST00000502850 TMSB15BA0A087X1C1 80 aa9.22□□□□□ -0.93
NUP54-202ENST00000502850 HSBP1L1C9JCN9 74 aa9.22□□□□□ -0.93
NUP54-202ENST00000502850 ORM1P02763 201 aa9.22□□□□□ -0.93
NUP54-202ENST00000502850 RPLP1P05386 114 aaKnown RBP9.22□□□□□ -0.93
NUP54-202ENST00000502850 HNRNPA3P51991 378 aaKnown RBP9.22□□□□□ -0.93
NUP54-202ENST00000502850 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
NUP54-202ENST00000502850 POLQO75417 2590 aa9.22□□□□□ -0.93
NUP54-202ENST00000502850 ANKRD17O75179 2603 aaKnown RBP9.22□□□□□ -0.93
NUP54-202ENST00000502850 MED13LQ71F56 2210 aa9.22□□□□□ -0.93
NUP54-202ENST00000502850 IGHV3OR16-10A0A075B7F0 116 aa9.21□□□□□ -0.93
NUP54-202ENST00000502850 IGHV3OR16-8A0A075B7F1 116 aa9.21□□□□□ -0.93
NUP54-202ENST00000502850 IGHV4-30-2A0A087WSY4 118 aa9.21□□□□□ -0.93
NUP54-202ENST00000502850 H3BUX3 64 aa9.21□□□□□ -0.93
NUP54-202ENST00000502850 IGHV4-38-2P0DP08 117 aa9.21□□□□□ -0.93
NUP54-202ENST00000502850 HLA-DMBP28068 263 aa9.21□□□□□ -0.93
NUP54-202ENST00000502850 TWIST1Q15672 202 aa9.21□□□□□ -0.93
NUP54-202ENST00000502850 C9orf47Q6ZRZ4 202 aa9.21□□□□□ -0.93
NUP54-202ENST00000502850 PRELID3AQ96N28 172 aa9.21□□□□□ -0.93
NUP54-202ENST00000502850 ST20Q9HBF5 79 aa9.21□□□□□ -0.93
NUP54-202ENST00000502850 ABCA2Q9BZC7 2435 aa9.21□□□□□ -0.94
NUP54-202ENST00000502850 CCDC168Q8NDH2 2452 aa9.21□□□□□ -0.94
NUP54-202ENST00000502850 OTOGQ6ZRI0 2925 aa9.21□□□□□ -0.94
NUP54-202ENST00000502850 OR4C46A6NHA9 309 aa9.2□□□□□ -0.94
NUP54-202ENST00000502850 D6R8Y8 96 aa9.2□□□□□ -0.94
NUP54-202ENST00000502850 M0QZ24 198 aa9.2□□□□□ -0.94
NUP54-202ENST00000502850 SAMD13Q5VXD3 122 aa9.2□□□□□ -0.94
NUP54-202ENST00000502850 Q6ZN92 141 aa9.2□□□□□ -0.94
NUP54-202ENST00000502850 GLMPQ8WWB7 406 aa9.2□□□□□ -0.94
NUP54-202ENST00000502850 SPG11Q96JI7 2443 aa9.2□□□□□ -0.94
NUP54-202ENST00000502850 C16orf92Q96LL3 132 aa9.2□□□□□ -0.94
NUP54-202ENST00000502850 TRAV8-2A0A0B4J237 113 aa9.2□□□□□ -0.94
NUP54-202ENST00000502850 J3QLI3 93 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms