RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 LGALS9CQ6DKI2 356 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 HCP5Q6MZN7 132 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 Q6P435 159 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 RNASEKQ6P5S7 137 aaKnown RBP4.04□□□□□ -1.76
HTT-202ENST00000502820 ACP7Q6ZNF0 438 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 C8orf86Q6ZUL3 223 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.04□□□□□ -1.76
HTT-202ENST00000502820 ZNRF1Q8ND25 227 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 ZNF502Q8TBZ5 544 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 AJUBAQ96IF1 538 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 HEYLQ9NQ87 328 aaPredicted RBP4.04□□□□□ -1.76
HTT-202ENST00000502820 SPANXCQ9NY87 97 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 RNF24Q9Y225 148 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 SPCS1Q9Y6A9 102 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 DNAH1Q9P2D7 4330 aa4.04□□□□□ -1.76
HTT-202ENST00000502820 TRAV8-6A0A0B4J262 113 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 IGHV1-24A0A0C4DH33 117 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 TRBV6-1A0A0K0K1D8 114 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 SH2D7A6NKC9 451 aaPredicted RBP4.03□□□□□ -1.76
HTT-202ENST00000502820 F2Z2F3 143 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 RBMXL2O75526 392 aaKnown RBP4.03□□□□□ -1.76
HTT-202ENST00000502820 NXPH3O95157 252 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 APOA2P02652 100 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 FRMD6-AS1P0C7T7 363 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 C8orf88P0DMB2 117 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 CEBPDP49716 269 aaPredicted RBP4.03□□□□□ -1.76
HTT-202ENST00000502820 UBE2E1P51965 193 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 MFAP2P55001 183 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 EDDM3BP56851 147 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 SLAQ13239 276 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 C18orf65Q6ZTR6 163 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 CD177Q8N6Q3 437 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 STPG3Q8N7X2 389 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 OR1L4Q8NGR5 311 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 CACNG8Q8WXS5 425 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 ZNF488Q96MN9 340 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 ZNF714Q96N38 554 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 MGST2Q99735 147 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 ENY2Q9NPA8 101 aa4.03□□□□□ -1.76
HTT-202ENST00000502820 FOXA2Q9Y261 457 aaPredicted RBP4.03□□□□□ -1.76
HTT-202ENST00000502820 AMMECR1Q9Y4X0 333 aaPredicted RBP4.03□□□□□ -1.76
HTT-202ENST00000502820 TRAV24A0A0B4J272 114 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 GAGE12HA6NDE8 117 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 INS-IGF2F8WCM5 200 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 LINC01619G3V211 115 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 IGLV2-8P01709 118 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 IGHG4P01861 327 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 SMIM13P0DJ93 91 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 AZU1P20160 251 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 PRDX2P32119 198 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 DUTP33316 252 aaKnown RBP4.02□□□□□ -1.77
HTT-202ENST00000502820 DLX6P56179 175 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 CKS1BP61024 79 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 SSBP2P81877 361 aaPredicted RBP4.02□□□□□ -1.77
HTT-202ENST00000502820 KIR3DS1Q14943 382 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 POU2AF1Q16633 256 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 PRAMEF5Q5TYX0 476 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 RBPMS2Q6ZRY4 209 aaKnown RBP4.02□□□□□ -1.77
HTT-202ENST00000502820 C2orf91Q6ZV80 131 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 ZNF329Q86UD4 541 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 FAM19A2Q8N3H0 131 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 TTC9CQ8N5M4 171 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 TEX45Q8NA69 505 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 KLHL30-AS1Q8NEE0 82 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 FMC1Q96HJ9 113 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 VGLL1Q99990 258 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 RPP21Q9H633 154 aaKnown RBP4.02□□□□□ -1.77
HTT-202ENST00000502820 AP5S1Q9NUS5 200 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 IDI2-AS1Q9NZ38 188 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 IL36RNQ9UBH0 155 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 JPT1Q9UK76 154 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 PRNDQ9UKY0 176 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 CYSLTR1Q9Y271 337 aa4.02□□□□□ -1.77
HTT-202ENST00000502820 ZNF256Q9Y2P7 627 aaPredicted RBP4.02□□□□□ -1.77
HTT-202ENST00000502820 CSMD3Q7Z407 3707 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 KIAA2026Q5HYC2 2103 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 LOC102724200A0A096LPH7 203 aaPredicted RBP4.01□□□□□ -1.77
HTT-202ENST00000502820 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.01□□□□□ -1.77
HTT-202ENST00000502820 PGPEP1LA6NFU8 196 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 FBLL1A6NHQ2 334 aaKnown RBP4.01□□□□□ -1.77
HTT-202ENST00000502820 C15orf61A6NNL5 157 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 C17orf98A8MV24 154 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 NPIPB6E9PJ23 425 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 TMEM262E9PQX1 116 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 K7EQM0 130 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 PEX7O00628 323 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 SPINT2O43291 252 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 SAP30O75446 220 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 TSPAN13O95857 204 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 RBP4P02753 201 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 CCL3L1P16619 93 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 CD24P25063 80 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 G6PCP35575 357 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 RAB9AP51151 201 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 SUB1P53999 127 aaKnown RBP eCLIP4.01□□□□□ -1.77
HTT-202ENST00000502820 FOXA3P55318 350 aaPredicted RBP4.01□□□□□ -1.77
HTT-202ENST00000502820 PSG5Q15238 335 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 C9orf66Q5T8R8 295 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 TMEM200BQ69YZ2 307 aa4.01□□□□□ -1.77
HTT-202ENST00000502820 LCN12Q6JVE5 192 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms