RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 TMPRSS5Q9H3S3 457 aa11.63□□□□□ -0.55
SSBP1-214ENST00000498107 IGKV2-40A0A087WW87 121 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-214ENST00000498107 TRBV7-9A0A0J9YWB2 115 aa11.62□□□□□ -0.55
SSBP1-214ENST00000498107 SMIM9A6NGZ8 99 aa11.62□□□□□ -0.55
SSBP1-214ENST00000498107 IGKV2D-40P01614 121 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-214ENST00000498107 CT45A10P0DMU9 189 aa11.62□□□□□ -0.55
SSBP1-214ENST00000498107 PRB4P10163 310 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-214ENST00000498107 SUMO1P63165 101 aaKnown RBP11.62□□□□□ -0.55
SSBP1-214ENST00000498107 ZNF705AQ6ZN79 300 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-214ENST00000498107 TMEM256Q8N2U0 113 aa11.62□□□□□ -0.55
SSBP1-214ENST00000498107 NEU1Q99519 415 aa11.62□□□□□ -0.55
SSBP1-214ENST00000498107 C20orf144Q9BQM9 153 aa11.62□□□□□ -0.55
SSBP1-214ENST00000498107 TMEM208Q9BTX3 173 aa11.62□□□□□ -0.55
SSBP1-214ENST00000498107 AGPAT4-IT1Q9H0P7 198 aa11.62□□□□□ -0.55
SSBP1-214ENST00000498107 ARL2-SNX15V9GYD0 113 aa11.62□□□□□ -0.55
SSBP1-214ENST00000498107 HBE1P02100 147 aa11.61□□□□□ -0.55
SSBP1-214ENST00000498107 NMBP08949 121 aa11.61□□□□□ -0.55
SSBP1-214ENST00000498107 ZNF138P52744 262 aa11.61□□□□□ -0.55
SSBP1-214ENST00000498107 ERCC8Q13216 396 aa11.61□□□□□ -0.55
SSBP1-214ENST00000498107 VGLL1Q99990 258 aa11.61□□□□□ -0.55
SSBP1-214ENST00000498107 EDA2RQ9HAV5 297 aa11.61□□□□□ -0.55
SSBP1-214ENST00000498107 ZNF492Q9P255 531 aa11.61□□□□□ -0.55
SSBP1-214ENST00000498107 RPH3ALQ9UNE2 315 aa11.61□□□□□ -0.55
SSBP1-214ENST00000498107 LENEPQ9Y5L5 61 aa11.61□□□□□ -0.55
SSBP1-214ENST00000498107 IGHV3OR16-12A0A075B7B8 117 aa11.6□□□□□ -0.55
SSBP1-214ENST00000498107 TRAV1-1A0A0B4J248 108 aa11.6□□□□□ -0.55
SSBP1-214ENST00000498107 FBLL1A6NHQ2 334 aaKnown RBP11.6□□□□□ -0.55
SSBP1-214ENST00000498107 CRXO43186 299 aaPredicted RBP11.6□□□□□ -0.55
SSBP1-214ENST00000498107 UBE2G2P60604 165 aa11.6□□□□□ -0.55
SSBP1-214ENST00000498107 GOLT1AQ6ZVE7 132 aa11.6□□□□□ -0.55
SSBP1-214ENST00000498107 IL17DQ8TAD2 202 aa11.6□□□□□ -0.55
SSBP1-214ENST00000498107 TCEAL7Q9BRU2 100 aa11.6□□□□□ -0.55
SSBP1-214ENST00000498107 C11orf68Q9H3H3 251 aaKnown RBP11.6□□□□□ -0.55
SSBP1-214ENST00000498107 X6R8D5 127 aa11.6□□□□□ -0.55
SSBP1-214ENST00000498107 TRAV12-2A0A075B6T6 113 aa11.59□□□□□ -0.55
SSBP1-214ENST00000498107 FAM74A7A6NL05 159 aa11.59□□□□□ -0.55
SSBP1-214ENST00000498107 GGTLC3B5MD39 225 aa11.59□□□□□ -0.55
SSBP1-214ENST00000498107 IFNA7P01567 189 aa11.59□□□□□ -0.55
SSBP1-214ENST00000498107 TCRAP04437 139 aa11.59□□□□□ -0.55
SSBP1-214ENST00000498107 CRISP2P16562 243 aa11.59□□□□□ -0.55
SSBP1-214ENST00000498107 C1orf158Q8N1D5 194 aa11.59□□□□□ -0.55
SSBP1-214ENST00000498107 FAM19A4Q96LR4 140 aa11.59□□□□□ -0.55
SSBP1-214ENST00000498107 EPDR1Q9UM22 224 aa11.59□□□□□ -0.55
SSBP1-214ENST00000498107 YTHDF2Q9Y5A9 579 aaKnown RBP11.59□□□□□ -0.55
SSBP1-214ENST00000498107 A0A0J9YWU9 116 aa11.58□□□□□ -0.56
SSBP1-214ENST00000498107 TMEM189A5PLL7 270 aa11.58□□□□□ -0.56
SSBP1-214ENST00000498107 F6UZH7 168 aa11.58□□□□□ -0.56
SSBP1-214ENST00000498107 GPX1P07203 203 aa11.58□□□□□ -0.56
SSBP1-214ENST00000498107 CYB561D1Q8N8Q1 229 aa11.58□□□□□ -0.56
SSBP1-214ENST00000498107 HIST1H2BAQ96A08 127 aa11.58□□□□□ -0.56
SSBP1-214ENST00000498107 NIPSNAP3BQ9BS92 247 aa11.58□□□□□ -0.56
SSBP1-214ENST00000498107 ATG101Q9BSB4 218 aa11.58□□□□□ -0.56
SSBP1-214ENST00000498107 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 A0A1B0GV50 99 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 KLLNB2CW77 178 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 H7BYZ3 331 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 GNG5P63218 68 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 BLOC1S1P78537 153 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 RRN3P1Q2M238 152 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 GFI1BQ5VTD9 330 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 CST9LP1Q5W188 147 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 Q8NAQ8 132 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 LINC01587Q99440 93 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 NDFIP1Q9BT67 221 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 MANBALQ9NQG1 85 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 BOLA1Q9Y3E2 137 aa11.57□□□□□ -0.56
SSBP1-214ENST00000498107 C7orf71A4D174 169 aa11.56□□□□□ -0.56
SSBP1-214ENST00000498107 J3KRW8 73 aa11.56□□□□□ -0.56
SSBP1-214ENST00000498107 TAS2R60P59551 318 aa11.56□□□□□ -0.56
SSBP1-214ENST00000498107 ALKAL2Q6UX46 152 aa11.56□□□□□ -0.56
SSBP1-214ENST00000498107 TMEM75Q8N9X5 138 aa11.56□□□□□ -0.56
SSBP1-214ENST00000498107 PAGE4O60829 102 aa11.55□□□□□ -0.56
SSBP1-214ENST00000498107 IFNA1P01562 189 aa11.55□□□□□ -0.56
SSBP1-214ENST00000498107 Q8TAT8 98 aa11.55□□□□□ -0.56
SSBP1-214ENST00000498107 TXNDC17Q9BRA2 123 aa11.55□□□□□ -0.56
SSBP1-214ENST00000498107 TRAV12-3A0A0B4J271 114 aa11.54□□□□□ -0.56
SSBP1-214ENST00000498107 PEX7O00628 323 aa11.54□□□□□ -0.56
SSBP1-214ENST00000498107 RNASE4P34096 147 aaKnown RBP11.54□□□□□ -0.56
SSBP1-214ENST00000498107 FLI1Q01543 452 aaPredicted RBP11.54□□□□□ -0.56
SSBP1-214ENST00000498107 CCDC28AQ8IWP9 274 aa11.54□□□□□ -0.56
SSBP1-214ENST00000498107 ZFAND2AQ8N6M9 145 aa11.54□□□□□ -0.56
SSBP1-214ENST00000498107 MUC7Q8TAX7 377 aa11.54□□□□□ -0.56
SSBP1-214ENST00000498107 PYGO2Q9BRQ0 406 aa11.54□□□□□ -0.56
SSBP1-214ENST00000498107 TRAV8-1A0A0A6YYK1 113 aa11.53□□□□□ -0.56
SSBP1-214ENST00000498107 TEX48A0A1B0GUV7 120 aa11.53□□□□□ -0.56
SSBP1-214ENST00000498107 LOC102723971A0A1B0GUV8 181 aa11.53□□□□□ -0.56
SSBP1-214ENST00000498107 RBMY1A1P0DJD3 496 aaKnown RBP11.53□□□□□ -0.56
SSBP1-214ENST00000498107 RBMY1CP0DJD4 496 aa11.53□□□□□ -0.56
SSBP1-214ENST00000498107 TAGLN2P37802 199 aaKnown RBP11.53□□□□□ -0.56
SSBP1-214ENST00000498107 PMS2P11Q13670 270 aa11.53□□□□□ -0.56
SSBP1-214ENST00000498107 KIR3DS1Q14943 382 aa11.53□□□□□ -0.56
SSBP1-214ENST00000498107 RBMY1FQ15415 496 aaKnown RBP11.53□□□□□ -0.56
SSBP1-214ENST00000498107 SAPCD1Q5SSQ6 148 aa11.53□□□□□ -0.56
SSBP1-214ENST00000498107 TREM1Q9NP99 234 aa11.53□□□□□ -0.56
SSBP1-214ENST00000498107 GNG13Q9P2W3 67 aa11.53□□□□□ -0.56
SSBP1-214ENST00000498107 PSG8Q9UQ74 426 aa11.53□□□□□ -0.56
SSBP1-214ENST00000498107 C11orf94C9JXX5 98 aa11.52□□□□□ -0.57
SSBP1-214ENST00000498107 C3orf84H3BNL1 204 aa11.52□□□□□ -0.57
SSBP1-214ENST00000498107 DEFB4AO15263 64 aa11.52□□□□□ -0.57
SSBP1-214ENST00000498107 BTN1A1Q13410 526 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms