RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 ATP6V0E1O15342 81 aa12.64□□□□□ -0.39
PCBP4-216ENST00000497390 GATA1P15976 413 aaPredicted RBP12.64□□□□□ -0.39
PCBP4-216ENST00000497390 OR10AG1Q8NH19 301 aa12.64□□□□□ -0.39
PCBP4-216ENST00000497390 RABAC1Q9UI14 185 aa12.64□□□□□ -0.39
PCBP4-216ENST00000497390 CLEC3BP05452 202 aa12.63□□□□□ -0.39
PCBP4-216ENST00000497390 UBE2V1Q13404 147 aa12.63□□□□□ -0.39
PCBP4-216ENST00000497390 LINC00527Q9UJ94 153 aa12.63□□□□□ -0.39
PCBP4-216ENST00000497390 RPL7P18124 248 aaKnown RBP12.63□□□□□ -0.39
PCBP4-216ENST00000497390 SIRPDQ9H106 197 aa12.63□□□□□ -0.39
PCBP4-216ENST00000497390 ORM1P02763 201 aa12.62□□□□□ -0.39
PCBP4-216ENST00000497390 CACNG7P62955 275 aa12.62□□□□□ -0.39
PCBP4-216ENST00000497390 PRSS57Q6UWY2 283 aa12.62□□□□□ -0.39
PCBP4-216ENST00000497390 IL17RELQ6ZVW7 336 aa12.62□□□□□ -0.39
PCBP4-216ENST00000497390 ZNF48Q96MX3 618 aaPredicted RBP12.62□□□□□ -0.39
PCBP4-216ENST00000497390 IGHV3OR16-10A0A075B7F0 116 aa12.62□□□□□ -0.39
PCBP4-216ENST00000497390 PSG9Q00887 426 aa12.62□□□□□ -0.39
PCBP4-216ENST00000497390 PAX8Q06710 450 aa12.62□□□□□ -0.39
PCBP4-216ENST00000497390 C21orf62-AS1Q17RA5 79 aa12.62□□□□□ -0.39
PCBP4-216ENST00000497390 ORMDL3Q8N138 153 aa12.62□□□□□ -0.39
PCBP4-216ENST00000497390 FER1L6-AS1Q8NA97 138 aa12.62□□□□□ -0.39
PCBP4-216ENST00000497390 U3KQK5 164 aa12.62□□□□□ -0.39
PCBP4-216ENST00000497390 EVI2AP22794 236 aa12.61□□□□□ -0.39
PCBP4-216ENST00000497390 CLEC19AQ6UXS0 136 aa12.61□□□□□ -0.39
PCBP4-216ENST00000497390 CCDC140Q96MF4 163 aa12.61□□□□□ -0.39
PCBP4-216ENST00000497390 C18orf15Q96N68 181 aa12.61□□□□□ -0.39
PCBP4-216ENST00000497390 ZFAND3Q9H8U3 227 aa12.61□□□□□ -0.39
PCBP4-216ENST00000497390 C11orf21Q9P2W6 132 aa12.61□□□□□ -0.39
PCBP4-216ENST00000497390 CLPSL1A2RUU4 121 aa12.61□□□□□ -0.39
PCBP4-216ENST00000497390 CKS2P33552 79 aa12.61□□□□□ -0.39
PCBP4-216ENST00000497390 EBI3Q14213 229 aa12.61□□□□□ -0.39
PCBP4-216ENST00000497390 Q6AWC8 147 aa12.61□□□□□ -0.39
PCBP4-216ENST00000497390 RNF185Q96GF1 192 aa12.61□□□□□ -0.39
PCBP4-216ENST00000497390 IGLC6P0CF74 106 aa12.6□□□□□ -0.39
PCBP4-216ENST00000497390 SAA4P35542 130 aa12.6□□□□□ -0.39
PCBP4-216ENST00000497390 VAMP3Q15836 100 aa12.6□□□□□ -0.39
PCBP4-216ENST00000497390 TMEM219Q86XT9 240 aa12.6□□□□□ -0.39
PCBP4-216ENST00000497390 ZNF502Q8TBZ5 544 aa12.6□□□□□ -0.39
PCBP4-216ENST00000497390 THYN1Q9P016 225 aa12.6□□□□□ -0.39
PCBP4-216ENST00000497390 FGF6P10767 208 aa12.6□□□□□ -0.39
PCBP4-216ENST00000497390 CCDC144NLQ6NUI1 221 aa12.6□□□□□ -0.39
PCBP4-216ENST00000497390 SPRY2O43597 315 aa12.59□□□□□ -0.39
PCBP4-216ENST00000497390 BUB3O43684 328 aa12.59□□□□□ -0.39
PCBP4-216ENST00000497390 COX8AP10176 69 aa12.59□□□□□ -0.39
PCBP4-216ENST00000497390 UBTD1Q9HAC8 227 aa12.59□□□□□ -0.39
PCBP4-216ENST00000497390 DKK2Q9UBU2 259 aa12.59□□□□□ -0.39
PCBP4-216ENST00000497390 IGHV2-70DA0A0C4DH43 119 aa12.59□□□□□ -0.39
PCBP4-216ENST00000497390 A0A1B0GW15 77 aa12.59□□□□□ -0.39
PCBP4-216ENST00000497390 UQCRFS1P47985 274 aa12.59□□□□□ -0.39
PCBP4-216ENST00000497390 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.59□□□□□ -0.39
PCBP4-216ENST00000497390 NHLH1Q02575 133 aa12.58□□□□□ -0.4
PCBP4-216ENST00000497390 SAPCD1Q5SSQ6 148 aa12.58□□□□□ -0.4
PCBP4-216ENST00000497390 DEFB125Q8N687 156 aa12.58□□□□□ -0.4
PCBP4-216ENST00000497390 BPESC1Q9GZL8 116 aa12.58□□□□□ -0.4
PCBP4-216ENST00000497390 KLRB1Q12918 225 aa12.58□□□□□ -0.4
PCBP4-216ENST00000497390 LY6DQ14210 128 aa12.58□□□□□ -0.4
PCBP4-216ENST00000497390 NAA38Q9BRA0 125 aaKnown RBP12.58□□□□□ -0.4
PCBP4-216ENST00000497390 CUBNO60494 3623 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 TRAV8-6A0A0B4J262 113 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 TRGV3P03979 118 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 DEFB1P60022 68 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 COX8CQ7Z4L0 72 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 TTTY13Q9BZ97 58 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 MS4A6AQ9H2W1 248 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 AMMECR1LQ6DCA0 310 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 DTX2Q86UW9 622 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 PCP2Q8IVA1 136 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 FLNCQ14315 2725 aa12.57□□□□□ -0.4
PCBP4-216ENST00000497390 CFAP46Q8IYW2 2715 aa12.56□□□□□ -0.4
PCBP4-216ENST00000497390 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.56□□□□□ -0.46e-7■■□□□ 12.3
PCBP4-216ENST00000497390 TRAV8-2A0A0B4J237 113 aa12.56□□□□□ -0.4
PCBP4-216ENST00000497390 AGPAT4-IT1Q9H0P7 198 aa12.56□□□□□ -0.4
PCBP4-216ENST00000497390 TRAV26-2A0A0B4J265 109 aa12.56□□□□□ -0.4
PCBP4-216ENST00000497390 HBDP02042 147 aa12.56□□□□□ -0.4
PCBP4-216ENST00000497390 IGF1P05019 195 aa12.56□□□□□ -0.4
PCBP4-216ENST00000497390 HIST1H1AQ02539 215 aaPredicted RBP12.56□□□□□ -0.4
PCBP4-216ENST00000497390 MINOS1Q5TGZ0 78 aa12.56□□□□□ -0.4
PCBP4-216ENST00000497390 OR4C5Q8NGB2 326 aa12.56□□□□□ -0.4
PCBP4-216ENST00000497390 FAM110DQ8TAY7 271 aaPredicted RBP12.56□□□□□ -0.4
PCBP4-216ENST00000497390 MINOS1-NBL1R4GNA1 71 aa12.56□□□□□ -0.4
PCBP4-216ENST00000497390 J3KRW8 73 aa12.55□□□□□ -0.4
PCBP4-216ENST00000497390 C1orf122Q6ZSJ8 110 aa12.55□□□□□ -0.4
PCBP4-216ENST00000497390 C19orf84I3L1E1 186 aa12.54□□□□□ -0.4
PCBP4-216ENST00000497390 RBX1P62877 108 aa12.54□□□□□ -0.4
PCBP4-216ENST00000497390 IFI27L1Q96BM0 104 aa12.54□□□□□ -0.4
PCBP4-216ENST00000497390 CSPG4Q6UVK1 2322 aa12.54□□□□□ -0.4
PCBP4-216ENST00000497390 FABP5P3A8MUU1 101 aa12.53□□□□□ -0.4
PCBP4-216ENST00000497390 SFTPCP11686 197 aa12.53□□□□□ -0.4
PCBP4-216ENST00000497390 BMI1P35226 326 aa12.53□□□□□ -0.4
PCBP4-216ENST00000497390 LMO4P61968 165 aa12.53□□□□□ -0.4
PCBP4-216ENST00000497390 C12orf54Q6X4T0 127 aa12.53□□□□□ -0.4
PCBP4-216ENST00000497390 S100A7AQ86SG5 101 aa12.53□□□□□ -0.4
PCBP4-216ENST00000497390 ZANQ9Y493 2812 aa12.53□□□□□ -0.4
PCBP4-216ENST00000497390 TRBV12-3P01733 135 aa12.52□□□□□ -0.4
PCBP4-216ENST00000497390 NMUP48645 174 aa12.52□□□□□ -0.4
PCBP4-216ENST00000497390 UBE2E1P51965 193 aa12.52□□□□□ -0.4
PCBP4-216ENST00000497390 TM4SF20Q53R12 229 aa12.52□□□□□ -0.4
PCBP4-216ENST00000497390 PRR9Q5T870 116 aa12.52□□□□□ -0.4
PCBP4-216ENST00000497390 BRD3OSQ6XYD6 125 aa12.52□□□□□ -0.4
PCBP4-216ENST00000497390 IGKV2D-26A0A0A0MRZ7 120 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms