RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 RPH3ALQ9UNE2 315 aa12.48□□□□□ -0.41
HDAC6-235ENST00000495515 GOLT1BQ9Y3E0 138 aa12.48□□□□□ -0.41
HDAC6-235ENST00000495515 AGRNO00468 2067 aa12.47□□□□□ -0.41
HDAC6-235ENST00000495515 A0A1B0GV50 99 aa12.47□□□□□ -0.41
HDAC6-235ENST00000495515 GGTLC3B5MD39 225 aa12.47□□□□□ -0.41
HDAC6-235ENST00000495515 M0R2Z0 102 aa12.47□□□□□ -0.41
HDAC6-235ENST00000495515 IFNA7P01567 189 aa12.47□□□□□ -0.41
HDAC6-235ENST00000495515 CT45A10P0DMU9 189 aa12.47□□□□□ -0.41
HDAC6-235ENST00000495515 ERCC8Q13216 396 aa12.47□□□□□ -0.41
HDAC6-235ENST00000495515 CSNK1G2-AS1Q8NCQ2 148 aa12.47□□□□□ -0.41
HDAC6-235ENST00000495515 OR11H2Q8NH07 326 aa12.47□□□□□ -0.41
HDAC6-235ENST00000495515 FAM74A7A6NL05 159 aa12.46□□□□□ -0.41
HDAC6-235ENST00000495515 ZNF138P52744 262 aa12.46□□□□□ -0.41
HDAC6-235ENST00000495515 BLOC1S1P78537 153 aa12.46□□□□□ -0.41
HDAC6-235ENST00000495515 CST9LP1Q5W188 147 aa12.46□□□□□ -0.41
HDAC6-235ENST00000495515 GOLT1AQ6ZVE7 132 aa12.46□□□□□ -0.41
HDAC6-235ENST00000495515 VGLL1Q99990 258 aa12.46□□□□□ -0.41
HDAC6-235ENST00000495515 TCEAL7Q9BRU2 100 aa12.46□□□□□ -0.41
HDAC6-235ENST00000495515 EPDR1Q9UM22 224 aa12.46□□□□□ -0.41
HDAC6-235ENST00000495515 YTHDF2Q9Y5A9 579 aaKnown RBP12.46□□□□□ -0.41
HDAC6-235ENST00000495515 TRBV7-9A0A0J9YWB2 115 aa12.45□□□□□ -0.42
HDAC6-235ENST00000495515 F6UZH7 168 aa12.45□□□□□ -0.42
HDAC6-235ENST00000495515 TCRAP04437 139 aa12.45□□□□□ -0.42
HDAC6-235ENST00000495515 ATG101Q9BSB4 218 aa12.45□□□□□ -0.42
HDAC6-235ENST00000495515 TMEM208Q9BTX3 173 aa12.45□□□□□ -0.42
HDAC6-235ENST00000495515 ZNF492Q9P255 531 aa12.45□□□□□ -0.42
HDAC6-235ENST00000495515 LENEPQ9Y5L5 61 aa12.45□□□□□ -0.42
HDAC6-235ENST00000495515 FBLL1A6NHQ2 334 aaKnown RBP12.44□□□□□ -0.42
HDAC6-235ENST00000495515 PAGE4O60829 102 aa12.44□□□□□ -0.42
HDAC6-235ENST00000495515 NMBP08949 121 aa12.44□□□□□ -0.42
HDAC6-235ENST00000495515 GNG5P63218 68 aa12.44□□□□□ -0.42
HDAC6-235ENST00000495515 CYB561D1Q8N8Q1 229 aa12.44□□□□□ -0.42
HDAC6-235ENST00000495515 HIST1H2BAQ96A08 127 aa12.44□□□□□ -0.42
HDAC6-235ENST00000495515 C20orf144Q9BQM9 153 aa12.44□□□□□ -0.42
HDAC6-235ENST00000495515 MANBALQ9NQG1 85 aa12.44□□□□□ -0.42
HDAC6-235ENST00000495515 TRAV12-2A0A075B6T6 113 aa12.43□□□□□ -0.42
HDAC6-235ENST00000495515 IGHV3OR16-12A0A075B7B8 117 aa12.43□□□□□ -0.42
HDAC6-235ENST00000495515 CRXO43186 299 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-235ENST00000495515 IFNA1P01562 189 aa12.43□□□□□ -0.42
HDAC6-235ENST00000495515 MIFP14174 115 aa12.43□□□□□ -0.42
HDAC6-235ENST00000495515 ZNF705AQ6ZN79 300 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-235ENST00000495515 TMEM256Q8N2U0 113 aa12.43□□□□□ -0.42
HDAC6-235ENST00000495515 SMIM9A6NGZ8 99 aa12.42□□□□□ -0.42
HDAC6-235ENST00000495515 GPX1P07203 203 aa12.42□□□□□ -0.42
HDAC6-235ENST00000495515 CRISP2P16562 243 aa12.42□□□□□ -0.42
HDAC6-235ENST00000495515 FAM19A4Q96LR4 140 aa12.42□□□□□ -0.42
HDAC6-235ENST00000495515 NEU1Q99519 415 aa12.42□□□□□ -0.42
HDAC6-235ENST00000495515 NDFIP1Q9BT67 221 aa12.42□□□□□ -0.42
HDAC6-235ENST00000495515 GNG13Q9P2W3 67 aa12.42□□□□□ -0.42
HDAC6-235ENST00000495515 PEX7O00628 323 aa12.41□□□□□ -0.42
HDAC6-235ENST00000495515 TAGLN2P37802 199 aaKnown RBP12.41□□□□□ -0.42
HDAC6-235ENST00000495515 GFI1BQ5VTD9 330 aa12.41□□□□□ -0.42
HDAC6-235ENST00000495515 C1orf158Q8N1D5 194 aa12.41□□□□□ -0.42
HDAC6-235ENST00000495515 TMEM75Q8N9X5 138 aa12.41□□□□□ -0.42
HDAC6-235ENST00000495515 Q8TAT8 98 aa12.41□□□□□ -0.42
HDAC6-235ENST00000495515 TXNDC17Q9BRA2 123 aa12.41□□□□□ -0.42
HDAC6-235ENST00000495515 NIPSNAP3BQ9BS92 247 aa12.41□□□□□ -0.42
HDAC6-235ENST00000495515 NBEAL2Q6ZNJ1 2754 aa12.4□□□□□ -0.42
HDAC6-235ENST00000495515 KLLNB2CW77 178 aa12.4□□□□□ -0.42
HDAC6-235ENST00000495515 C11orf94C9JXX5 98 aa12.4□□□□□ -0.42
HDAC6-235ENST00000495515 H7BYZ3 331 aa12.4□□□□□ -0.42
HDAC6-235ENST00000495515 J3KRW8 73 aa12.4□□□□□ -0.42
HDAC6-235ENST00000495515 CCL20P78556 96 aa12.4□□□□□ -0.42
HDAC6-235ENST00000495515 PMS2P11Q13670 270 aa12.4□□□□□ -0.42
HDAC6-235ENST00000495515 TEX261Q6UWH6 196 aa12.4□□□□□ -0.42
HDAC6-235ENST00000495515 CCDC28AQ8IWP9 274 aa12.4□□□□□ -0.42
HDAC6-235ENST00000495515 LINC01587Q99440 93 aa12.4□□□□□ -0.42
HDAC6-235ENST00000495515 X6R8D5 127 aa12.4□□□□□ -0.42
HDAC6-235ENST00000495515 TRAV8-1A0A0A6YYK1 113 aa12.39□□□□□ -0.43
HDAC6-235ENST00000495515 C7orf71A4D174 169 aa12.39□□□□□ -0.43
HDAC6-235ENST00000495515 ATP5G3P48201 142 aa12.39□□□□□ -0.43
HDAC6-235ENST00000495515 FLI1Q01543 452 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-235ENST00000495515 RRN3P1Q2M238 152 aa12.39□□□□□ -0.43
HDAC6-235ENST00000495515 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
HDAC6-235ENST00000495515 WWC2-AS2Q96NR7 200 aa12.39□□□□□ -0.43
HDAC6-235ENST00000495515 C11orf68Q9H3H3 251 aaKnown RBP12.39□□□□□ -0.43
HDAC6-235ENST00000495515 PSG8Q9UQ74 426 aa12.39□□□□□ -0.43
HDAC6-235ENST00000495515 TRAV12-3A0A0B4J271 114 aa12.38□□□□□ -0.43
HDAC6-235ENST00000495515 IGHV4-28A0A0C4DH34 117 aa12.38□□□□□ -0.43
HDAC6-235ENST00000495515 RNASE4P34096 147 aaKnown RBP12.38□□□□□ -0.43
HDAC6-235ENST00000495515 TAS2R60P59551 318 aa12.38□□□□□ -0.43
HDAC6-235ENST00000495515 SAPCD1Q5SSQ6 148 aa12.38□□□□□ -0.43
HDAC6-235ENST00000495515 ZNF680Q8NEM1 530 aa12.38□□□□□ -0.43
HDAC6-235ENST00000495515 EDA2RQ9HAV5 297 aa12.38□□□□□ -0.43
HDAC6-235ENST00000495515 TREM1Q9NP99 234 aa12.38□□□□□ -0.43
HDAC6-235ENST00000495515 A0A0J9YWU9 116 aa12.37□□□□□ -0.43
HDAC6-235ENST00000495515 TMEM189A5PLL7 270 aa12.37□□□□□ -0.43
HDAC6-235ENST00000495515 S100A9P06702 114 aaKnown RBP12.37□□□□□ -0.43
HDAC6-235ENST00000495515 AKR1C3P42330 323 aa12.37□□□□□ -0.43
HDAC6-235ENST00000495515 UBE2G1P62253 170 aa12.37□□□□□ -0.43
HDAC6-235ENST00000495515 KIR3DS1Q14943 382 aa12.37□□□□□ -0.43
HDAC6-235ENST00000495515 PRNTQ86SH4 94 aa12.37□□□□□ -0.43
HDAC6-235ENST00000495515 Q8NAQ8 132 aa12.37□□□□□ -0.43
HDAC6-235ENST00000495515 FMC1Q96HJ9 113 aa12.37□□□□□ -0.43
HDAC6-235ENST00000495515 SGK494Q96LW2 274 aa12.37□□□□□ -0.43
HDAC6-235ENST00000495515 DNAH9Q9NYC9 4486 aa12.37□□□□□ -0.43
HDAC6-235ENST00000495515 BCL2P10415 239 aa12.36□□□□□ -0.43
HDAC6-235ENST00000495515 MEF2BQ02080 365 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-235ENST00000495515 BTN1A1Q13410 526 aa12.36□□□□□ -0.43
HDAC6-235ENST00000495515 LYPD6BQ8NI32 183 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms