RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 ZNF503Q96F45 646 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 NPCDR1Q9BY65 106 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 OR5AC2Q9NZP5 309 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 LINC00588Q9Y4M8 146 aa9.36□□□□□ -0.91
CTDSP1-212ENST00000494067 TRGV2A0A075B6R0 118 aa9.35□□□□□ -0.91
CTDSP1-212ENST00000494067 A6NHS1 94 aa9.35□□□□□ -0.91
CTDSP1-212ENST00000494067 H3BNG1 76 aa9.35□□□□□ -0.91
CTDSP1-212ENST00000494067 GPX1P07203 203 aa9.35□□□□□ -0.91
CTDSP1-212ENST00000494067 DAZ2Q13117 558 aaKnown RBP9.35□□□□□ -0.91
CTDSP1-212ENST00000494067 ERCC8Q13216 396 aa9.35□□□□□ -0.91
CTDSP1-212ENST00000494067 TTC32Q5I0X7 151 aa9.35□□□□□ -0.91
CTDSP1-212ENST00000494067 TMEM78Q5T7P6 136 aa9.35□□□□□ -0.91
CTDSP1-212ENST00000494067 LINC00612Q8N6U2 182 aa9.35□□□□□ -0.91
CTDSP1-212ENST00000494067 OR5C1Q8NGR4 320 aa9.35□□□□□ -0.91
CTDSP1-212ENST00000494067 Q9H8V8 135 aa9.35□□□□□ -0.91
CTDSP1-212ENST00000494067 A0A0J9YY99 117 aa9.34□□□□□ -0.91
CTDSP1-212ENST00000494067 PRAF2O60831 178 aa9.34□□□□□ -0.91
CTDSP1-212ENST00000494067 UPK1BO75841 260 aa9.34□□□□□ -0.91
CTDSP1-212ENST00000494067 LRRC37A5PQ49AS3 106 aa9.34□□□□□ -0.91
CTDSP1-212ENST00000494067 Q6ZQT7 251 aa9.34□□□□□ -0.91
CTDSP1-212ENST00000494067 THAP6Q8TBB0 222 aa9.34□□□□□ -0.91
CTDSP1-212ENST00000494067 FAM167A-AS1Q96KT0 104 aa9.34□□□□□ -0.91
CTDSP1-212ENST00000494067 SLC25A2Q9BXI2 301 aa9.34□□□□□ -0.91
CTDSP1-212ENST00000494067 MRPL32Q9BYC8 188 aaKnown RBP9.34□□□□□ -0.91
CTDSP1-212ENST00000494067 NMES1Q9C002 83 aa9.34□□□□□ -0.91
CTDSP1-212ENST00000494067 OR51M1Q9H341 326 aa9.34□□□□□ -0.91
CTDSP1-212ENST00000494067 RGS13O14921 159 aa9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 NMBP08949 121 aa9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 NBEAP1P0C6P0 100 aa9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 RNASE4P34096 147 aaKnown RBP9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 CSN1S1P47710 185 aa9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 H2BFSP57053 126 aa9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 ICAM4Q14773 271 aa9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 EXOC3-AS1Q8N2X6 119 aa9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 EIF4E3Q8N5X7 224 aaKnown RBP9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 FAM19A4Q96LR4 140 aa9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 LINC00467Q9BRT7 94 aa9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 AGPAT4-IT1Q9H0P7 198 aa9.33□□□□□ -0.92
CTDSP1-212ENST00000494067 TRGV1A0A0A0MS02 117 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 KLLNB2CW77 178 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 PET100P0DJ07 73 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 HOXA5P20719 270 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 ANXA2RQ3ZCQ2 193 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 PRR9Q5T870 116 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 FAM122CQ6P4D5 195 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 C9orf47Q6ZRZ4 202 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 ARPC5LQ9BPX5 153 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 PAXXQ9BUH6 204 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 GSN-AS1Q9NRJ2 163 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 PCLOQ9Y6V0 5065 aa9.32□□□□□ -0.92
CTDSP1-212ENST00000494067 C16orf90A8MZG2 172 aa9.31□□□□□ -0.92
CTDSP1-212ENST00000494067 INMT-MINDY4F8WBC2 141 aa9.31□□□□□ -0.92
CTDSP1-212ENST00000494067 CRISP2P16562 243 aa9.31□□□□□ -0.92
CTDSP1-212ENST00000494067 TNP2Q05952 138 aa9.31□□□□□ -0.92
CTDSP1-212ENST00000494067 CD300CQ08708 224 aa9.31□□□□□ -0.92
CTDSP1-212ENST00000494067 BTN1A1Q13410 526 aa9.31□□□□□ -0.92
CTDSP1-212ENST00000494067 Q6ZTI0 123 aa9.31□□□□□ -0.92
CTDSP1-212ENST00000494067 SCGB1C1Q8TD33 95 aa9.31□□□□□ -0.92
CTDSP1-212ENST00000494067 WDR61Q9GZS3 305 aaKnown RBP9.31□□□□□ -0.92
CTDSP1-212ENST00000494067 TMPRSS5Q9H3S3 457 aa9.31□□□□□ -0.92
CTDSP1-212ENST00000494067 FUT9Q9Y231 359 aa9.31□□□□□ -0.92
CTDSP1-212ENST00000494067 IGKV2-40A0A087WW87 121 aaPredicted RBP9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 OR7C2O60412 319 aa9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 ZNF324O75467 553 aaPredicted RBP9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 IFNA5P01569 189 aa9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 IGKV2D-40P01614 121 aaPredicted RBP9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 OR10J4P0C629 311 aa9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 DEFA1P59665 94 aa9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 DEFA3P59666 94 aa9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 IBA57Q5T440 356 aaKnown RBP9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 C11orf72Q8NBR9 251 aa9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 C18orf15Q96N68 181 aa9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 UPK3BQ9BT76 320 aa9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 ZNF492Q9P255 531 aa9.3□□□□□ -0.92
CTDSP1-212ENST00000494067 TRBV7-9A0A0J9YWB2 115 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 A0A1W2PPQ1 181 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 SSNA1O43805 119 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 EIF3GO75821 320 aaKnown RBP eCLIP9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 ZNF138P52744 262 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 TCL1AP56279 114 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 TAS2R45P59539 299 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 SLAQ13239 276 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 ESRGQ1W209 222 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 ZNF575Q86XF7 245 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 LYPD1Q8N2G4 141 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 PHYHIPLQ96FC7 376 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 ATP5SQ99766 215 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 VGLL1Q99990 258 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 KRTAP1-5Q9BYS1 174 aa9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 MRPS16Q9Y3D3 137 aaKnown RBP9.29□□□□□ -0.92
CTDSP1-212ENST00000494067 IGHV1OR15-1A0A075B7D0 117 aa9.28□□□□□ -0.92
CTDSP1-212ENST00000494067 RBAKDNA6NC62 111 aa9.28□□□□□ -0.92
CTDSP1-212ENST00000494067 SPINK4O60575 86 aa9.28□□□□□ -0.92
CTDSP1-212ENST00000494067 BTF3P20290 206 aaKnown RBP9.28□□□□□ -0.92
CTDSP1-212ENST00000494067 RANP62826 216 aaKnown RBP9.28□□□□□ -0.92
CTDSP1-212ENST00000494067 ZNF415Q09FC8 603 aa9.28□□□□□ -0.92
CTDSP1-212ENST00000494067 KHDC3LQ587J8 217 aa9.28□□□□□ -0.92
CTDSP1-212ENST00000494067 FAM74A1Q5RGS3 127 aa9.28□□□□□ -0.92
CTDSP1-212ENST00000494067 ZFAND2AQ8N6M9 145 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms