RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 UFC1Q9Y3C8 167 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 V9GYV3 84 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 A0A087X0K7 114 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 A0A1W2PS18 150 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 J3KRW8 73 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 CRLF1O75462 422 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 PFN1P07737 140 aaKnown RBP10.53□□□□□ -0.72
SMPD4-219ENST00000491128 S100A7P31151 101 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 NUDT10Q8NFP7 164 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 ANAPC16Q96DE5 110 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 NUDT11Q96G61 164 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 ZC2HC1AQ96GY0 325 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 GRAMD2BQ96HH9 432 aa10.53□□□□□ -0.72
SMPD4-219ENST00000491128 C2orf70A6NJV1 201 aa10.52□□□□□ -0.73
SMPD4-219ENST00000491128 ZNF705GA8MUZ8 300 aaPredicted RBP10.52□□□□□ -0.73
SMPD4-219ENST00000491128 RPL19P84098 196 aaKnown RBP10.52□□□□□ -0.73
SMPD4-219ENST00000491128 MLST8Q9BVC4 326 aa10.52□□□□□ -0.73
SMPD4-219ENST00000491128 CTDSP1Q9GZU7 261 aa10.52□□□□□ -0.73
SMPD4-219ENST00000491128 NRN1Q9NPD7 142 aa10.52□□□□□ -0.73
SMPD4-219ENST00000491128 IFITM10A6NMD0 228 aa10.52□□□□□ -0.73
SMPD4-219ENST00000491128 CDPF1Q6NVV7 123 aa10.52□□□□□ -0.73
SMPD4-219ENST00000491128 Q6ZQT7 251 aa10.52□□□□□ -0.73
SMPD4-219ENST00000491128 C16orf95Q9H693 158 aa10.52□□□□□ -0.73
SMPD4-219ENST00000491128 GZMBP10144 247 aa10.51□□□□□ -0.73
SMPD4-219ENST00000491128 ZNF738Q8NE65 137 aa10.51□□□□□ -0.73
SMPD4-219ENST00000491128 TMEM242Q9NWH2 141 aa10.51□□□□□ -0.73
SMPD4-219ENST00000491128 NOTCH3Q9UM47 2321 aa10.51□□□□□ -0.73
SMPD4-219ENST00000491128 K7EMT4 169 aa10.51□□□□□ -0.73
SMPD4-219ENST00000491128 CRIP1P50238 77 aa10.51□□□□□ -0.73
SMPD4-219ENST00000491128 TMEM75Q8N9X5 138 aa10.51□□□□□ -0.73
SMPD4-219ENST00000491128 FAM210BQ96KR6 192 aa10.51□□□□□ -0.73
SMPD4-219ENST00000491128 LY96Q9Y6Y9 160 aa10.51□□□□□ -0.73
SMPD4-219ENST00000491128 K7EQM0 130 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 CD33P20138 364 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 PROK1P58294 105 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 PYY3Q5JQD4 70 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 SLC50A1Q9BRV3 221 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 MS4A6AQ9H2W1 248 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 TMSB15BA0A087X1C1 80 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 CXorf65A6NEN9 183 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 SOCS3O14543 225 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 ZNF688P0C7X2 276 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 JMJD8Q96S16 334 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 AGPAT4-IT1Q9H0P7 198 aa10.5□□□□□ -0.73
SMPD4-219ENST00000491128 CCL24O00175 119 aa10.49□□□□□ -0.73
SMPD4-219ENST00000491128 BTF3P20290 206 aaKnown RBP10.49□□□□□ -0.73
SMPD4-219ENST00000491128 HOXA5P20719 270 aa10.49□□□□□ -0.73
SMPD4-219ENST00000491128 ZNF80P51504 273 aaPredicted RBP10.49□□□□□ -0.73
SMPD4-219ENST00000491128 TMEM183AQ8IXX5 376 aa10.49□□□□□ -0.73
SMPD4-219ENST00000491128 FBN1P35555 2871 aaKnown RBP10.49□□□□□ -0.73
SMPD4-219ENST00000491128 ZNF253O75346 499 aa10.49□□□□□ -0.73
SMPD4-219ENST00000491128 OR9G4Q8NGQ1 327 aa10.49□□□□□ -0.73
SMPD4-219ENST00000491128 A8MWP6 167 aa10.48□□□□□ -0.73
SMPD4-219ENST00000491128 TRGC2P03986 189 aa10.48□□□□□ -0.73
SMPD4-219ENST00000491128 GDF5OSQ5U4N7 250 aa10.48□□□□□ -0.73
SMPD4-219ENST00000491128 REC114Q7Z4M0 266 aa10.48□□□□□ -0.73
SMPD4-219ENST00000491128 DCANP1Q8TF63 244 aa10.48□□□□□ -0.73
SMPD4-219ENST00000491128 PRR25Q96S07 402 aa10.48□□□□□ -0.73
SMPD4-219ENST00000491128 IGKV3-20P01619 116 aa10.48□□□□□ -0.73
SMPD4-219ENST00000491128 KIR3DS1Q14943 382 aa10.48□□□□□ -0.73
SMPD4-219ENST00000491128 IL36BQ9NZH7 164 aa10.48□□□□□ -0.73
SMPD4-219ENST00000491128 TSSC4Q9Y5U2 329 aaPredicted RBP10.48□□□□□ -0.73
SMPD4-219ENST00000491128 LGALS9O00182 355 aa10.47□□□□□ -0.73
SMPD4-219ENST00000491128 OSTCQ9NRP0 149 aa10.47□□□□□ -0.73
SMPD4-219ENST00000491128 PPP1R2P9O14990 202 aa10.47□□□□□ -0.73
SMPD4-219ENST00000491128 DEFA6Q01524 100 aa10.47□□□□□ -0.73
SMPD4-219ENST00000491128 HIST1H1AQ02539 215 aaPredicted RBP10.47□□□□□ -0.73
SMPD4-219ENST00000491128 ZNF124Q15973 351 aa10.47□□□□□ -0.73
SMPD4-219ENST00000491128 PSMG4Q5JS54 123 aa10.47□□□□□ -0.73
SMPD4-219ENST00000491128 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.47□□□□□ -0.73
SMPD4-219ENST00000491128 DAZAP1Q96EP5 407 aaKnown RBP10.47□□□□□ -0.73
SMPD4-219ENST00000491128 MUC21A0A0G2JKD1 596 aa10.46□□□□□ -0.73
SMPD4-219ENST00000491128 MUC21A0A140T8X8 626 aa10.46□□□□□ -0.73
SMPD4-219ENST00000491128 P01737 135 aa10.46□□□□□ -0.73
SMPD4-219ENST00000491128 MUC21Q5SSG8 566 aa10.46□□□□□ -0.73
SMPD4-219ENST00000491128 MRPL54Q6P161 138 aaKnown RBP10.46□□□□□ -0.73
SMPD4-219ENST00000491128 C14orf144Q96I85 54 aa10.46□□□□□ -0.73
SMPD4-219ENST00000491128 IZUMO1RA6ND01 250 aa10.46□□□□□ -0.74
SMPD4-219ENST00000491128 ADARB2-AS1A8MUL3 147 aa10.46□□□□□ -0.74
SMPD4-219ENST00000491128 NDUFA7O95182 113 aa10.46□□□□□ -0.74
SMPD4-219ENST00000491128 CSN3P07498 182 aa10.46□□□□□ -0.74
SMPD4-219ENST00000491128 KCNIP4Q6PIL6 250 aa10.46□□□□□ -0.74
SMPD4-219ENST00000491128 TMEM61Q8N0U2 210 aa10.46□□□□□ -0.74
SMPD4-219ENST00000491128 TPPP3Q9BW30 176 aa10.46□□□□□ -0.74
SMPD4-219ENST00000491128 A0A1B0GV90 55 aa10.45□□□□□ -0.74
SMPD4-219ENST00000491128 C19orf71A6NCJ1 209 aa10.45□□□□□ -0.74
SMPD4-219ENST00000491128 OR2D3Q8NGH3 330 aa10.45□□□□□ -0.74
SMPD4-219ENST00000491128 ZFP30Q9Y2G7 519 aa10.45□□□□□ -0.74
SMPD4-219ENST00000491128 TRBV24-1A0A075B6N3 115 aa10.45□□□□□ -0.74
SMPD4-219ENST00000491128 TMEM78Q5T7P6 136 aa10.45□□□□□ -0.74
SMPD4-219ENST00000491128 GTSF1Q8WW33 167 aa10.45□□□□□ -0.74
SMPD4-219ENST00000491128 NEU1Q99519 415 aa10.45□□□□□ -0.74
SMPD4-219ENST00000491128 AGRNO00468 2067 aa10.44□□□□□ -0.74
SMPD4-219ENST00000491128 NDUFA6P56556 154 aa10.44□□□□□ -0.74
SMPD4-219ENST00000491128 PRR9Q5T870 116 aa10.44□□□□□ -0.74
SMPD4-219ENST00000491128 IMMP2LQ96T52 175 aa10.44□□□□□ -0.74
SMPD4-219ENST00000491128 HIGD1CA8MV81 97 aa10.44□□□□□ -0.74
SMPD4-219ENST00000491128 SH2D1AO60880 128 aa10.44□□□□□ -0.74
SMPD4-219ENST00000491128 FOXL1Q12952 345 aa10.44□□□□□ -0.74
SMPD4-219ENST00000491128 CD300EQ496F6 205 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms