RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 SNRPD3P62318 126 aaKnown RBP1.91□□□□□ -2.1
VPS26A-206ENST00000489794 BLCAPP62952 87 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 QRFPP83859 136 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 C1orf137Q5JT78 98 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 C10orf55Q5SWW7 151 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 TP53RKQ96S44 253 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 NABP2Q9BQ15 211 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 RGS12O14924 1447 aa1.91□□□□□ -2.1
VPS26A-206ENST00000489794 COL1A1P02452 1464 aaPredicted RBP1.9□□□□□ -2.11
VPS26A-206ENST00000489794 A0A087WSZ3 146 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 LINC00694P0DN24 101 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 CXCL8P10145 99 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 AKR1D1P51857 326 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 PCBD1P61457 104 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 NCS1P62166 190 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 ZNF833PQ6ZTB9 187 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 MMGT1Q8N4V1 131 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 DEFB119Q8N690 84 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 OR4C6Q8NH72 309 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 CST11Q9H112 138 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 COL24A1Q17RW2 1714 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 KIAA1549Q9HCM3 1950 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 DISP2A7MBM2 1401 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 TNS3Q68CZ2 1445 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 NCOA3Q9Y6Q9 1424 aa1.9□□□□□ -2.11
VPS26A-206ENST00000489794 HEATR1Q9H583 2144 aaKnown RBP1.9□□□□□ -2.11
VPS26A-206ENST00000489794 CEP192Q8TEP8 1941 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 ERCC6Q03468 1493 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 C3orf85A0A1B0GTC6 90 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 F8W036 122 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 K7EP13 123 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 RNASE3P12724 160 aaKnown RBP1.89□□□□□ -2.11
VPS26A-206ENST00000489794 HLA-DRB4P13762 266 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 HIST1H1BP16401 226 aaKnown RBP1.89□□□□□ -2.11
VPS26A-206ENST00000489794 KDELR1P24390 212 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 RPS25P62851 125 aaKnown RBP1.89□□□□□ -2.11
VPS26A-206ENST00000489794 RPL13AP3Q6NVV1 102 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 TEX261Q6UWH6 196 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 TMEM91Q6ZNR0 172 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 GKN2Q86XP6 184 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 CTAGE3PQ8IX95 158 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 FAM19A2Q8N3H0 131 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 PSMF1Q92530 271 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 REG4Q9BYZ8 158 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 COMMD3Q9UBI1 195 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 ERG28Q9UKR5 140 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 SOX21Q9Y651 276 aaPredicted RBP1.89□□□□□ -2.11
VPS26A-206ENST00000489794 HLA-DRB4X5D2U9 266 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 KDM6AO15550 1401 aaPredicted RBP1.89□□□□□ -2.11
VPS26A-206ENST00000489794 PRG4Q92954 1404 aaPredicted RBP1.89□□□□□ -2.11
VPS26A-206ENST00000489794 MYH1P12882 1939 aa1.89□□□□□ -2.11
VPS26A-206ENST00000489794 PLXNA4Q9HCM2 1894 aa1.88□□□□□ -2.11
VPS26A-206ENST00000489794 USP54Q70EL1 1684 aa1.88□□□□□ -2.11
VPS26A-206ENST00000489794 FAM236AA0A1B0GUQ0 79 aa1.88□□□□□ -2.11
VPS26A-206ENST00000489794 FAM236BA0A1B0GV22 79 aa1.88□□□□□ -2.11
VPS26A-206ENST00000489794 SULT1C4O75897 302 aa1.88□□□□□ -2.11
VPS26A-206ENST00000489794 CD14P08571 375 aa1.88□□□□□ -2.11
VPS26A-206ENST00000489794 TSPAN19P0C672 248 aa1.88□□□□□ -2.11
VPS26A-206ENST00000489794 DNAJB13P59910 316 aa1.88□□□□□ -2.11
VPS26A-206ENST00000489794 GLIPR1L1Q6UWM5 242 aa1.88□□□□□ -2.11
VPS26A-206ENST00000489794 OR5AS1Q8N127 324 aa1.88□□□□□ -2.11
VPS26A-206ENST00000489794 LINC00269Q8N2A0 174 aa1.88□□□□□ -2.11
VPS26A-206ENST00000489794 ZNF625Q96I27 306 aaPredicted RBP1.88□□□□□ -2.11
VPS26A-206ENST00000489794 TRGV2A0A075B6R0 118 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 LOC107984156A0A0G2JMH3 177 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 ZNF736B4DX44 427 aaPredicted RBP1.87□□□□□ -2.11
VPS26A-206ENST00000489794 HYPMO75409 117 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 CCL4P13236 92 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 NEDD8Q15843 81 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 CLLU1Q5K131 121 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 CASC2Q6XLA1 102 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 ARL17AQ8IVW1 177 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 Q8N2B8 174 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 C15orf53Q8NAA6 179 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 OTOSQ8NHW6 89 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 METTL1Q9UBP6 276 aaKnown RBP1.87□□□□□ -2.11
VPS26A-206ENST00000489794 LAMB4A4D0S4 1761 aa1.87□□□□□ -2.11
VPS26A-206ENST00000489794 ALPK2Q86TB3 2170 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 ARHGAP31Q2M1Z3 1444 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 A0A1B0GV90 55 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 M0R129 80 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 NPFFO15130 113 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 CD3DP04234 171 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 FREM3P0C091 2139 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 ARL14EPLP0DKL9 152 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 CKS2P33552 79 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 ETV6P41212 452 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 COPZ1P61923 177 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 ZCCHC23Q6ZST2 131 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 TEN1Q86WV5 123 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 C4orf3Q8WVX3 66 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 PATE1Q8WXA2 126 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 SLC35B3Q9H1N7 401 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 DNAJC15Q9Y5T4 150 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 MUC4Q99102 2169 aa1.86□□□□□ -2.11
VPS26A-206ENST00000489794 IGKV2-29A2NJV5 120 aaPredicted RBP1.85□□□□□ -2.11
VPS26A-206ENST00000489794 GNG7O60262 68 aa1.85□□□□□ -2.11
VPS26A-206ENST00000489794 EDF1O60869 148 aaKnown RBP1.85□□□□□ -2.11
VPS26A-206ENST00000489794 CNBPP62633 177 aaKnown RBP1.85□□□□□ -2.11
VPS26A-206ENST00000489794 MIR22HGQ0VDD5 57 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms