RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 SERF2P84101 59 aa10.1□□□□□ -0.79
COL9A2-208ENST00000488463 GFI1BQ5VTD9 330 aa10.1□□□□□ -0.79
COL9A2-208ENST00000488463 LGALS9CQ6DKI2 356 aa10.1□□□□□ -0.79
COL9A2-208ENST00000488463 OR10J6PQ8NGY7 276 aa10.1□□□□□ -0.79
COL9A2-208ENST00000488463 RNF141Q8WVD5 230 aa10.1□□□□□ -0.79
COL9A2-208ENST00000488463 PHYHIPLQ96FC7 376 aa10.1□□□□□ -0.79
COL9A2-208ENST00000488463 PSMG3Q9BT73 122 aaPredicted RBP10.1□□□□□ -0.79
COL9A2-208ENST00000488463 TMEM208Q9BTX3 173 aa10.1□□□□□ -0.79
COL9A2-208ENST00000488463 PAXXQ9BUH6 204 aa10.1□□□□□ -0.79
COL9A2-208ENST00000488463 PRELID1Q9Y255 219 aa10.1□□□□□ -0.79
COL9A2-208ENST00000488463 FAT2Q9NYQ8 4349 aa10.09□□□□□ -0.79
COL9A2-208ENST00000488463 DEFB131BA0A096LNP1 70 aa10.09□□□□□ -0.79
COL9A2-208ENST00000488463 IGLL5B9A064 214 aa10.09□□□□□ -0.79
COL9A2-208ENST00000488463 EIF3GO75821 320 aaKnown RBP eCLIP10.09□□□□□ -0.79
COL9A2-208ENST00000488463 ERCC8Q13216 396 aa10.09□□□□□ -0.79
COL9A2-208ENST00000488463 ICAM4Q14773 271 aa10.09□□□□□ -0.79
COL9A2-208ENST00000488463 ACOT6Q3I5F7 207 aaPredicted RBP10.09□□□□□ -0.79
COL9A2-208ENST00000488463 AKR1C8PQ5T2L2 129 aa10.09□□□□□ -0.79
COL9A2-208ENST00000488463 TMEM256Q8N2U0 113 aa10.09□□□□□ -0.79
COL9A2-208ENST00000488463 AGPAT4-IT1Q9H0P7 198 aa10.09□□□□□ -0.79
COL9A2-208ENST00000488463 HECTD4Q9Y4D8 3996 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 IGHV4-4A0A075B6R2 117 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 SEC11BP0C7V7 166 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 TAS2R60P59551 318 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 RAB2AP61019 212 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 C9orf47Q6ZRZ4 202 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 OR2G3Q8NGZ4 309 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 STOML3Q8TAV4 291 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 C20orf144Q9BQM9 153 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 NIPSNAP3BQ9BS92 247 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 CYTL1Q9NRR1 136 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 PPP1R14DQ9NXH3 145 aa10.08□□□□□ -0.8
COL9A2-208ENST00000488463 IGKV2-40A0A087WW87 121 aaPredicted RBP10.07□□□□□ -0.8
COL9A2-208ENST00000488463 TEX48A0A1B0GUV7 120 aa10.07□□□□□ -0.8
COL9A2-208ENST00000488463 A0A1W2PPV4 95 aa10.07□□□□□ -0.8
COL9A2-208ENST00000488463 KLLNB2CW77 178 aa10.07□□□□□ -0.8
COL9A2-208ENST00000488463 UMAD1C9J7I0 102 aa10.07□□□□□ -0.8
COL9A2-208ENST00000488463 IGKV2D-40P01614 121 aaPredicted RBP10.07□□□□□ -0.8
COL9A2-208ENST00000488463 M6PRP20645 277 aa10.07□□□□□ -0.8
COL9A2-208ENST00000488463 ATP6V0CP27449 155 aa10.07□□□□□ -0.8
COL9A2-208ENST00000488463 RNASE8Q8TDE3 154 aaKnown RBP10.07□□□□□ -0.8
COL9A2-208ENST00000488463 LINC01587Q99440 93 aa10.07□□□□□ -0.8
COL9A2-208ENST00000488463 VGLL1Q99990 258 aa10.07□□□□□ -0.8
COL9A2-208ENST00000488463 LYRM9A8MSI8 78 aa10.06□□□□□ -0.8
COL9A2-208ENST00000488463 H7BYZ3 331 aa10.06□□□□□ -0.8
COL9A2-208ENST00000488463 OR7C2O60412 319 aa10.06□□□□□ -0.8
COL9A2-208ENST00000488463 CRISP2P16562 243 aa10.06□□□□□ -0.8
COL9A2-208ENST00000488463 RAB5CP51148 216 aa10.06□□□□□ -0.8
COL9A2-208ENST00000488463 FAM122CQ6P4D5 195 aa10.06□□□□□ -0.8
COL9A2-208ENST00000488463 LINC00477Q96M19 166 aa10.06□□□□□ -0.8
COL9A2-208ENST00000488463 AAMDCQ9H7C9 122 aa10.06□□□□□ -0.8
COL9A2-208ENST00000488463 ZNF324O75467 553 aaPredicted RBP10.05□□□□□ -0.8
COL9A2-208ENST00000488463 IFNA7P01567 189 aa10.05□□□□□ -0.8
COL9A2-208ENST00000488463 LEPP41159 167 aa10.05□□□□□ -0.8
COL9A2-208ENST00000488463 UBE2L3P68036 154 aaKnown RBP10.05□□□□□ -0.8
COL9A2-208ENST00000488463 KHDC3LQ587J8 217 aa10.05□□□□□ -0.8
COL9A2-208ENST00000488463 PRR9Q5T870 116 aa10.05□□□□□ -0.8
COL9A2-208ENST00000488463 LYPD1Q8N2G4 141 aa10.05□□□□□ -0.8
COL9A2-208ENST00000488463 ZFAND2AQ8N6M9 145 aa10.05□□□□□ -0.8
COL9A2-208ENST00000488463 SH3BGRL3Q9H299 93 aa10.05□□□□□ -0.8
COL9A2-208ENST00000488463 Q9H3A6 140 aa10.05□□□□□ -0.8
COL9A2-208ENST00000488463 TRAV12-3A0A0B4J271 114 aa10.04□□□□□ -0.8
COL9A2-208ENST00000488463 TEX46H3BTG2 121 aa10.04□□□□□ -0.8
COL9A2-208ENST00000488463 J3KRW8 73 aa10.04□□□□□ -0.8
COL9A2-208ENST00000488463 TAS2R45P59539 299 aa10.04□□□□□ -0.8
COL9A2-208ENST00000488463 RANP62826 216 aaKnown RBP10.04□□□□□ -0.8
COL9A2-208ENST00000488463 DPPA3Q6W0C5 159 aa10.04□□□□□ -0.8
COL9A2-208ENST00000488463 ZNF493Q6ZR52 646 aa10.04□□□□□ -0.8
COL9A2-208ENST00000488463 OR10G4Q8NGN3 311 aa10.04□□□□□ -0.8
COL9A2-208ENST00000488463 OR10G9Q8NGN4 311 aa10.04□□□□□ -0.8
COL9A2-208ENST00000488463 OR10G7Q8NGN6 311 aa10.04□□□□□ -0.8
COL9A2-208ENST00000488463 TMEM263Q8WUH6 116 aaKnown RBP10.04□□□□□ -0.8
COL9A2-208ENST00000488463 ZNF492Q9P255 531 aa10.04□□□□□ -0.8
COL9A2-208ENST00000488463 BOLA1Q9Y3E2 137 aa10.04□□□□□ -0.8
COL9A2-208ENST00000488463 C7orf71A4D174 169 aa10.03□□□□□ -0.8
COL9A2-208ENST00000488463 SLC25A5P05141 298 aaKnown RBP10.03□□□□□ -0.8
COL9A2-208ENST00000488463 NMBP08949 121 aa10.03□□□□□ -0.8
COL9A2-208ENST00000488463 DAD1P61803 113 aa10.03□□□□□ -0.8
COL9A2-208ENST00000488463 PQLC2Q6ZP29 291 aa10.03□□□□□ -0.8
COL9A2-208ENST00000488463 Q6ZQT7 251 aa10.03□□□□□ -0.8
COL9A2-208ENST00000488463 LINC00612Q8N6U2 182 aa10.03□□□□□ -0.8
COL9A2-208ENST00000488463 SUN5Q8TC36 379 aa10.03□□□□□ -0.8
COL9A2-208ENST00000488463 TMED6Q8WW62 240 aa10.03□□□□□ -0.8
COL9A2-208ENST00000488463 C16orf74Q96GX8 76 aa10.03□□□□□ -0.8
COL9A2-208ENST00000488463 ACTR3CQ9C0K3 210 aaPredicted RBP10.03□□□□□ -0.8
COL9A2-208ENST00000488463 RBAKDNA6NC62 111 aa10.02□□□□□ -0.81
COL9A2-208ENST00000488463 HMGB3O15347 200 aaKnown RBP10.02□□□□□ -0.81
COL9A2-208ENST00000488463 STAG3L2P0CL84 134 aa10.02□□□□□ -0.81
COL9A2-208ENST00000488463 STAG3L3P0CL85 134 aa10.02□□□□□ -0.81
COL9A2-208ENST00000488463 HTN1P15515 57 aa10.02□□□□□ -0.81
COL9A2-208ENST00000488463 BTN1A1Q13410 526 aa10.02□□□□□ -0.81
COL9A2-208ENST00000488463 SSX7Q7RTT5 188 aa10.02□□□□□ -0.81
COL9A2-208ENST00000488463 FAM210BQ96KR6 192 aa10.02□□□□□ -0.81
COL9A2-208ENST00000488463 LINC00467Q9BRT7 94 aa10.02□□□□□ -0.81
COL9A2-208ENST00000488463 TRBV7-9A0A0J9YWB2 115 aa10.01□□□□□ -0.81
COL9A2-208ENST00000488463 DIRC3C9JPN6 131 aa10.01□□□□□ -0.81
COL9A2-208ENST00000488463 CDC34P49427 236 aaPredicted RBP10.01□□□□□ -0.81
COL9A2-208ENST00000488463 ZNF138P52744 262 aa10.01□□□□□ -0.81
COL9A2-208ENST00000488463 RAB14P61106 215 aa10.01□□□□□ -0.81
COL9A2-208ENST00000488463 BLOC1S1P78537 153 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms