RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 NEK7Q8TDX7 302 aa0.04□□□□□ -2.4
CCDC66-221ENST00000487739 NABP2Q9BQ15 211 aa0.04□□□□□ -2.4
CCDC66-221ENST00000487739 KPNA4O00629 521 aaPredicted RBP0.03□□□□□ -2.4
CCDC66-221ENST00000487739 FABP4P15090 132 aa0.03□□□□□ -2.4
CCDC66-221ENST00000487739 CAV3P56539 151 aa0.03□□□□□ -2.4
CCDC66-221ENST00000487739 C10orf111Q8N326 155 aa0.03□□□□□ -2.4
CCDC66-221ENST00000487739 AP3S1Q92572 193 aa0.03□□□□□ -2.4
CCDC66-221ENST00000487739 PLEKHB2Q96CS7 222 aa0.03□□□□□ -2.4
CCDC66-221ENST00000487739 MED11Q9P086 117 aa0.03□□□□□ -2.4
CCDC66-221ENST00000487739 TECPR2O15040 1411 aa0.03□□□□□ -2.41
CCDC66-221ENST00000487739 KIAA1107Q9UPP5 1409 aa0.03□□□□□ -2.41
CCDC66-221ENST00000487739 C3orf85A0A1B0GTC6 90 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 A0A1W2PRS3 328 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 H3BQV1 296 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 SULT1C4O75897 302 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 IGHV3-30P01768 117 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 IGHV3-30-5P0DP03 117 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 FABP2P12104 132 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 BASP1P80723 227 aaKnown RBP0.02□□□□□ -2.41
CCDC66-221ENST00000487739 GLYATL3Q5SZD4 288 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 CSAG1Q6PB30 78 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 C5orf17Q8NAS9 161 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 CCL4L1Q8NHW4 92 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 HOPXQ9BPY8 73 aaPredicted RBP0.02□□□□□ -2.41
CCDC66-221ENST00000487739 LRTM1Q9HBL6 345 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 STOML2Q9UJZ1 356 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 UFC1Q9Y3C8 167 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 DSPPQ9NZW4 1301 aa0.02□□□□□ -2.41
CCDC66-221ENST00000487739 SYNE2Q8WXH0 6885 aaKnown RBP0.01□□□□□ -2.41
CCDC66-221ENST00000487739 MYH1P12882 1939 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 A6NN06 94 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 C5orf58C9J3I9 102 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 RPS3P23396 243 aaKnown RBP eCLIP0.01□□□□□ -2.41
CCDC66-221ENST00000487739 MRPS36P82909 103 aaKnown RBP0.01□□□□□ -2.41
CCDC66-221ENST00000487739 ASB16-AS1Q495Z4 193 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 TMED4Q7Z7H5 227 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 LYG2Q86SG7 212 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 FAM24BQ8N5W8 94 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 OR4B1Q8NGF8 309 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 OR5AK2Q8NH90 309 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 DYDC1Q8WWB3 177 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 CLEC2BQ92478 149 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 LINC00208Q96KT6 92 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 IL20Q9NYY1 176 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 EIF3AQ14152 1382 aaKnown RBP0.01□□□□□ -2.41
CCDC66-221ENST00000487739 TRAPPC8Q9Y2L5 1435 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 NINQ8N4C6 2090 aa0.01□□□□□ -2.41
CCDC66-221ENST00000487739 LOC107984156A0A0G2JMH3 177 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 TRDV1A0A1B0GX56 115 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 PRORSD1PA6NEY8 169 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 H7BYZ3 331 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 TRACP01848 142 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 TCTAP57738 103 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 SNRPD3P62318 126 aaKnown RBP0□□□□□ -2.41
CCDC66-221ENST00000487739 ZNF56Q15929 161 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 FER1L6Q2WGJ9 1857 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 XAF1Q6GPH4 301 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 ARL17AQ8IVW1 177 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 STX19Q8N4C7 294 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 OR5H6Q8NGV6 325 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 GRPEL2Q8TAA5 225 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 DIRC1Q969H9 104 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 AP1S3Q96PC3 154 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 MCEEQ96PE7 176 aa0□□□□□ -2.41
CCDC66-221ENST00000487739 FSIP2Q5CZC0 6907 aa-0□□□□□ -2.41
CCDC66-221ENST00000487739 SYNMO15061 1565 aa-0.01□□□□□ -2.41
CCDC66-221ENST00000487739 DLC1Q96QB1 1528 aa-0.01□□□□□ -2.41
CCDC66-221ENST00000487739 FGD6Q6ZV73 1430 aa-0.01□□□□□ -2.41
CCDC66-221ENST00000487739 GABARAPH6UMI1 98 aa-0.01□□□□□ -2.41
CCDC66-221ENST00000487739 CD3DP04234 171 aa-0.01□□□□□ -2.41
CCDC66-221ENST00000487739 C10orf99Q6UWK7 81 aa-0.01□□□□□ -2.41
CCDC66-221ENST00000487739 GID8Q9NWU2 228 aa-0.01□□□□□ -2.41
CCDC66-221ENST00000487739 FKBP11Q9NYL4 201 aa-0.01□□□□□ -2.41
CCDC66-221ENST00000487739 NUBP2Q9Y5Y2 271 aa-0.01□□□□□ -2.41
CCDC66-221ENST00000487739 TCOF1Q13428 1488 aaKnown RBP-0.02□□□□□ -2.41
CCDC66-221ENST00000487739 EVI2AP22794 236 aa-0.02□□□□□ -2.41
CCDC66-221ENST00000487739 NDUFA6P56556 154 aa-0.02□□□□□ -2.41
CCDC66-221ENST00000487739 RPL37P61927 97 aaKnown RBP-0.02□□□□□ -2.41
CCDC66-221ENST00000487739 FXYD3Q14802 87 aa-0.02□□□□□ -2.41
CCDC66-221ENST00000487739 TEX29Q8N6K0 151 aa-0.02□□□□□ -2.41
CCDC66-221ENST00000487739 CDC26Q8NHZ8 85 aa-0.02□□□□□ -2.41
CCDC66-221ENST00000487739 CIB3Q96Q77 187 aaPredicted RBP-0.02□□□□□ -2.41
CCDC66-221ENST00000487739 SPRR2GQ9BYE4 73 aa-0.02□□□□□ -2.41
CCDC66-221ENST00000487739 NBDYA0A0U1RRE5 68 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 LOC101927531A0A1B0GV80 90 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 A0A1W2PPB8 328 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 BBIP1A8MTZ0 92 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 KIR3DP1A8MWS1 328 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 TMEM238C9JI98 176 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 GYPBP06028 91 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 SERPINB1P30740 379 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 S100A11P31949 105 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 CRYBA4P53673 196 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 MAXP61244 160 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 SPINK13Q1W4C9 94 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 C3orf33Q6P1S2 294 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 DCUN1D2Q6PH85 259 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 IZUMO2Q6UXV1 221 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 C3orf62Q6ZUJ4 267 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 C5orf56Q8N8D9 126 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms