RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 TNFRSF6BO95407 300 aa9.47□□□□□ -0.89
COL3A1-206ENST00000487010 CTSGP08311 255 aa9.47□□□□□ -0.89
COL3A1-206ENST00000487010 SMIM13P0DJ93 91 aa9.47□□□□□ -0.89
COL3A1-206ENST00000487010 KLRD1Q13241 179 aa9.47□□□□□ -0.89
COL3A1-206ENST00000487010 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
COL3A1-206ENST00000487010 EP300Q09472 2414 aaPredicted RBP9.47□□□□□ -0.89
COL3A1-206ENST00000487010 IGKV2D-26A0A0A0MRZ7 120 aa9.47□□□□□ -0.89
COL3A1-206ENST00000487010 ODF3BA8MYP8 253 aa9.47□□□□□ -0.89
COL3A1-206ENST00000487010 RIPPLY3P57055 190 aa9.47□□□□□ -0.89
COL3A1-206ENST00000487010 SAMD5Q5TGI4 173 aa9.46□□□□□ -0.89
COL3A1-206ENST00000487010 CACNA1HO95180 2353 aa9.46□□□□□ -0.89
COL3A1-206ENST00000487010 MGAQ8IWI9 3026 aa9.46□□□□□ -0.9
COL3A1-206ENST00000487010 SCGB2A1O75556 95 aa9.46□□□□□ -0.9
COL3A1-206ENST00000487010 IGKCP01834 107 aa9.46□□□□□ -0.9
COL3A1-206ENST00000487010 PRSS1P07477 247 aa9.46□□□□□ -0.9
COL3A1-206ENST00000487010 FABP2P12104 132 aa9.46□□□□□ -0.9
COL3A1-206ENST00000487010 EVI2AP22794 236 aa9.46□□□□□ -0.9
COL3A1-206ENST00000487010 ERCC8Q13216 396 aa9.46□□□□□ -0.9
COL3A1-206ENST00000487010 LINC01559Q495D7 138 aa9.46□□□□□ -0.9
COL3A1-206ENST00000487010 TM4SF20Q53R12 229 aa9.46□□□□□ -0.9
COL3A1-206ENST00000487010 PRR30Q53SZ7 412 aaPredicted RBP9.46□□□□□ -0.9
COL3A1-206ENST00000487010 DYNAPQ8N1N2 210 aa9.46□□□□□ -0.9
COL3A1-206ENST00000487010 KALRNO60229 2985 aa9.46□□□□□ -0.9
COL3A1-206ENST00000487010 DCHS1Q96JQ0 3298 aa9.45□□□□□ -0.9
COL3A1-206ENST00000487010 CEP250Q9BV73 2442 aa9.45□□□□□ -0.9
COL3A1-206ENST00000487010 CNOT1A5YKK6 2376 aaKnown RBP9.45□□□□□ -0.9
COL3A1-206ENST00000487010 NCBP2LA6PVI3 153 aaKnown RBP9.45□□□□□ -0.9
COL3A1-206ENST00000487010 GCSHP23434 173 aa9.45□□□□□ -0.9
COL3A1-206ENST00000487010 FXYD2P54710 66 aa9.45□□□□□ -0.9
COL3A1-206ENST00000487010 LINC01560Q8TB33 94 aa9.45□□□□□ -0.9
COL3A1-206ENST00000487010 DMXL1Q9Y485 3027 aa9.45□□□□□ -0.9
COL3A1-206ENST00000487010 ARHGAP32A7KAX9 2087 aa9.45□□□□□ -0.9
COL3A1-206ENST00000487010 PRAC2D3DTV9 90 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 M0R1W7 72 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 ATP5LO75964 103 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 GATA1P15976 413 aaPredicted RBP9.44□□□□□ -0.9
COL3A1-206ENST00000487010 PRTN3P24158 256 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 S100A7P31151 101 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 TMEM158Q8WZ71 300 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 CHAC1Q9BUX1 264 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 TTTY13Q9BZ97 58 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 SMPXQ9UHP9 88 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 BSNQ9UPA5 3926 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 POLEQ07864 2286 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 IGHV3OR16-8A0A075B7F1 116 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 PPIFP30405 207 aaKnown RBP9.44□□□□□ -0.9
COL3A1-206ENST00000487010 DTX2Q86UW9 622 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 Q8N6K4 173 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 Q8N8P6 123 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 FOXC2Q99958 501 aa9.44□□□□□ -0.9
COL3A1-206ENST00000487010 IGLV2-18A0A075B6J9 118 aa9.43□□□□□ -0.9
COL3A1-206ENST00000487010 DPM2O94777 84 aa9.43□□□□□ -0.9
COL3A1-206ENST00000487010 GTSCR1Q86UQ5 136 aa9.43□□□□□ -0.9
COL3A1-206ENST00000487010 ADGRG4Q8IZF6 3080 aa9.43□□□□□ -0.9
COL3A1-206ENST00000487010 TRBV25-1A0A075B6N4 114 aa9.43□□□□□ -0.9
COL3A1-206ENST00000487010 IGHV3-35A0A0C4DH35 117 aa9.43□□□□□ -0.9
COL3A1-206ENST00000487010 RBAKDNA6NC62 111 aa9.43□□□□□ -0.9
COL3A1-206ENST00000487010 LY6HO94772 140 aa9.43□□□□□ -0.9
COL3A1-206ENST00000487010 SMIM17P0DL12 118 aa9.43□□□□□ -0.9
COL3A1-206ENST00000487010 CCDC144NLQ6NUI1 221 aa9.43□□□□□ -0.9
COL3A1-206ENST00000487010 IL17RELQ6ZVW7 336 aa9.43□□□□□ -0.9
COL3A1-206ENST00000487010 PHLDA1Q8WV24 401 aaPredicted RBP9.43□□□□□ -0.9
COL3A1-206ENST00000487010 IGKV3D-20A0A0C4DH25 116 aa9.42□□□□□ -0.9
COL3A1-206ENST00000487010 TMEM8BA6NDV4 472 aa9.42□□□□□ -0.9
COL3A1-206ENST00000487010 HLA-DRB4P13762 266 aa9.42□□□□□ -0.9
COL3A1-206ENST00000487010 EBI3Q14213 229 aa9.42□□□□□ -0.9
COL3A1-206ENST00000487010 ZC2HC1BQ5TFG8 222 aa9.42□□□□□ -0.9
COL3A1-206ENST00000487010 RNF182Q8N6D2 247 aa9.42□□□□□ -0.9
COL3A1-206ENST00000487010 VKORC1Q9BQB6 163 aa9.42□□□□□ -0.9
COL3A1-206ENST00000487010 TM2D2Q9BX73 214 aa9.42□□□□□ -0.9
COL3A1-206ENST00000487010 HLA-DRB4X5D2U9 266 aa9.42□□□□□ -0.9
COL3A1-206ENST00000487010 AKAP13Q12802 2813 aa9.42□□□□□ -0.9
COL3A1-206ENST00000487010 APC2O95996 2303 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 IGHV7-81A0A0B4J1V7 117 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 BUB3O43684 328 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 VMO1Q7Z5L0 202 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 CEND1Q8N111 149 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 TIMD4Q96H15 378 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 PRSS47A8MTI9 375 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 OOSP1A8MZH6 123 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 TMEM238C9JI98 176 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 K7ERJ3 54 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 TRGV3P03979 118 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 TMEM11P17152 192 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 RAB9AP51151 201 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 SRSF1Q07955 248 aaKnown RBP eCLIP9.41□□□□□ -0.9
COL3A1-206ENST00000487010 ZNF502Q8TBZ5 544 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 ZFAND3Q9H8U3 227 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 C11orf21Q9P2W6 132 aa9.41□□□□□ -0.9
COL3A1-206ENST00000487010 TRAV40A0A0B4J280 105 aa9.4□□□□□ -0.9
COL3A1-206ENST00000487010 NRACQ8N912 160 aa9.4□□□□□ -0.9
COL3A1-206ENST00000487010 MYOZ3Q8TDC0 251 aa9.4□□□□□ -0.9
COL3A1-206ENST00000487010 SLC50A1Q9BRV3 221 aa9.4□□□□□ -0.9
COL3A1-206ENST00000487010 AGPAT4-IT1Q9H0P7 198 aa9.4□□□□□ -0.9
COL3A1-206ENST00000487010 TMEM160Q9NX00 188 aa9.4□□□□□ -0.9
COL3A1-206ENST00000487010 LAGE3Q14657 143 aa9.4□□□□□ -0.91
COL3A1-206ENST00000487010 NHP2Q9NX24 153 aaKnown RBP9.4□□□□□ -0.91
COL3A1-206ENST00000487010 MRPL35Q9NZE8 188 aaKnown RBP9.4□□□□□ -0.91
COL3A1-206ENST00000487010 IGHV7-4-1A0A0J9YVY3 117 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms