RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TCAPO15273 167 aa13.89□□□□□ -0.19
PDLIM7-207ENST00000486828 ZNF80P51504 273 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-207ENST00000486828 ZNF138P52744 262 aa13.89□□□□□ -0.19
PDLIM7-207ENST00000486828 TMEM219Q86XT9 240 aa13.89□□□□□ -0.19
PDLIM7-207ENST00000486828 IGHV3OR16-10A0A075B7F0 116 aa13.88□□□□□ -0.19
PDLIM7-207ENST00000486828 SYS1-DBNDD2H3BUS1 97 aa13.88□□□□□ -0.19
PDLIM7-207ENST00000486828 SRSF2Q01130 221 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-207ENST00000486828 LINC00173Q6ZV60 143 aa13.88□□□□□ -0.19
PDLIM7-207ENST00000486828 SLC50A1Q9BRV3 221 aa13.88□□□□□ -0.19
PDLIM7-207ENST00000486828 RPLP1P05386 114 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-207ENST00000486828 CSN3P07498 182 aa13.88□□□□□ -0.19
PDLIM7-207ENST00000486828 CRIP2P52943 208 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-207ENST00000486828 C19orf54Q5BKX5 351 aa13.88□□□□□ -0.19
PDLIM7-207ENST00000486828 TRAV41A0A0B4J266 112 aa13.87□□□□□ -0.19
PDLIM7-207ENST00000486828 IGHV4-61A0A0C4DH41 118 aa13.87□□□□□ -0.19
PDLIM7-207ENST00000486828 TMEM213A2RRL7 107 aa13.87□□□□□ -0.19
PDLIM7-207ENST00000486828 RBAKDNA6NC62 111 aa13.87□□□□□ -0.19
PDLIM7-207ENST00000486828 ATP5G2Q06055 141 aa13.87□□□□□ -0.19
PDLIM7-207ENST00000486828 Q6ZN92 141 aa13.87□□□□□ -0.19
PDLIM7-207ENST00000486828 PIFOQ8TCI5 191 aa13.87□□□□□ -0.19
PDLIM7-207ENST00000486828 ATP6V0BQ99437 205 aa13.87□□□□□ -0.19
PDLIM7-207ENST00000486828 CCL19Q99731 98 aa13.87□□□□□ -0.19
PDLIM7-207ENST00000486828 DOPEY2Q9Y3R5 2298 aa13.87□□□□□ -0.19
PDLIM7-207ENST00000486828 CRYBG3Q68DQ2 2970 aa13.87□□□□□ -0.19
PDLIM7-207ENST00000486828 FAM104BQ5XKR9 115 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 C10orf105Q8TEF2 133 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 METTL26Q96S19 204 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 U3KQK5 164 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 TRAV40A0A0B4J280 105 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 IGHV3-66A0A0C4DH42 116 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 PRAC2D3DTV9 90 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 IGLC6P0CF74 106 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 IGLL1P15814 213 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 HNRNPA3P51991 378 aaKnown RBP13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 FER1L6-AS1Q8NA97 138 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 MEGF9Q9H1U4 602 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 AP5S1Q9NUS5 200 aa13.86□□□□□ -0.19
PDLIM7-207ENST00000486828 OR4C46A6NHA9 309 aa13.85□□□□□ -0.19
PDLIM7-207ENST00000486828 FAM223BA6NKX1 122 aa13.85□□□□□ -0.19
PDLIM7-207ENST00000486828 ERCC8Q13216 396 aa13.85□□□□□ -0.19
PDLIM7-207ENST00000486828 BRD3OSQ6XYD6 125 aa13.85□□□□□ -0.19
PDLIM7-207ENST00000486828 FAM223AQ8IWN6 122 aa13.85□□□□□ -0.19
PDLIM7-207ENST00000486828 RNF182Q8N6D2 247 aa13.85□□□□□ -0.19
PDLIM7-207ENST00000486828 HSPB8Q9UJY1 196 aa13.85□□□□□ -0.19
PDLIM7-207ENST00000486828 U3KQE9 123 aa13.85□□□□□ -0.19
PDLIM7-207ENST00000486828 FABP5P3A8MUU1 101 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 NDUFS8O00217 210 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 FA2HQ7L5A8 372 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 ZNF575Q86XF7 245 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 AMN1Q8IY45 258 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 PRSS3P2Q8NHM4 247 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 MAP1LC3CQ9BXW4 147 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 A1L4Q6 167 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 D6R8Y8 96 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 CIDEAO60543 219 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 BATFQ16520 125 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 PET117Q6UWS5 81 aa13.84□□□□□ -0.19
PDLIM7-207ENST00000486828 CSMD1Q96PZ7 3565 aa13.83□□□□□ -0.2
PDLIM7-207ENST00000486828 IGHV3OR16-13A0A075B7E8 117 aa13.83□□□□□ -0.2
PDLIM7-207ENST00000486828 IGHV3-74A0A0B4J1X5 117 aa13.83□□□□□ -0.2
PDLIM7-207ENST00000486828 MRPL53Q96EL3 112 aaKnown RBP13.83□□□□□ -0.2
PDLIM7-207ENST00000486828 PSMG3-AS1Q96PY0 264 aa13.83□□□□□ -0.2
PDLIM7-207ENST00000486828 TRAV8-2A0A0B4J237 113 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 ZNF207O43670 478 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 ORM1P02763 201 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 CLEC2AQ6UVW9 174 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 ORMDL3Q8N138 153 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 PRELID3AQ96N28 172 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 TMEM191AQ9H0A3 160 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 LINC00527Q9UJ94 153 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 AKAP6Q13023 2319 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 PTPN13Q12923 2485 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 ABCA2Q9BZC7 2435 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 MUC21A0A0G2JKD1 596 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 MUC21A0A140T8X8 626 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 TSPOP30536 169 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 TWIST1Q15672 202 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 LINC01559Q495D7 138 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 MRPL51Q4U2R6 128 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 MUC21Q5SSG8 566 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 LAMTOR2Q9Y2Q5 125 aa13.82□□□□□ -0.2
PDLIM7-207ENST00000486828 IGHV3-49A0A0A0MS15 119 aa13.81□□□□□ -0.2
PDLIM7-207ENST00000486828 TRGV3P03979 118 aa13.81□□□□□ -0.2
PDLIM7-207ENST00000486828 COL5A1-AS1Q5SY13 56 aa13.81□□□□□ -0.2
PDLIM7-207ENST00000486828 C8orf86Q6ZUL3 223 aa13.81□□□□□ -0.2
PDLIM7-207ENST00000486828 IL17RELQ6ZVW7 336 aa13.81□□□□□ -0.2
PDLIM7-207ENST00000486828 OR10AG1Q8NH19 301 aa13.81□□□□□ -0.2
PDLIM7-207ENST00000486828 MRPS16Q9Y3D3 137 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-207ENST00000486828 IGF1P05019 195 aa13.8□□□□□ -0.2
PDLIM7-207ENST00000486828 IGHV4-38-2P0DP08 117 aa13.8□□□□□ -0.2
PDLIM7-207ENST00000486828 IFI27P40305 119 aaPredicted RBP13.8□□□□□ -0.2
PDLIM7-207ENST00000486828 CNFNQ9BYD5 112 aa13.8□□□□□ -0.2
PDLIM7-207ENST00000486828 AGPAT4-IT1Q9H0P7 198 aa13.8□□□□□ -0.2
PDLIM7-207ENST00000486828 ST20Q9HBF5 79 aa13.8□□□□□ -0.2
PDLIM7-207ENST00000486828 SIGLEC8Q9NYZ4 499 aa13.8□□□□□ -0.2
PDLIM7-207ENST00000486828 ATP5J2P56134 94 aa13.8□□□□□ -0.2
PDLIM7-207ENST00000486828 ZNF747Q9BV97 191 aa13.8□□□□□ -0.2
PDLIM7-207ENST00000486828 HIF1ANQ9NWT6 349 aa13.8□□□□□ -0.2
PDLIM7-207ENST00000486828 CELSR2Q9HCU4 2923 aa13.79□□□□□ -0.2
PDLIM7-207ENST00000486828 IGHV4-30-2A0A087WSY4 118 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms