RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 ERCC8Q13216 396 aa9.56□□□□□ -0.88
SCAF4-206ENST00000485790 SLAQ13239 276 aa9.56□□□□□ -0.88
SCAF4-206ENST00000485790 RAB32Q13637 225 aa9.56□□□□□ -0.88
SCAF4-206ENST00000485790 ANXA2RQ3ZCQ2 193 aa9.56□□□□□ -0.88
SCAF4-206ENST00000485790 EIF4E3Q8N5X7 224 aaKnown RBP9.56□□□□□ -0.88
SCAF4-206ENST00000485790 BLNKQ8WV28 456 aa9.56□□□□□ -0.88
SCAF4-206ENST00000485790 LINC00467Q9BRT7 94 aa9.56□□□□□ -0.88
SCAF4-206ENST00000485790 UPK3BQ9BT76 320 aa9.56□□□□□ -0.88
SCAF4-206ENST00000485790 AGPAT4-IT1Q9H0P7 198 aa9.56□□□□□ -0.88
SCAF4-206ENST00000485790 C11orf1Q9H5F2 150 aa9.56□□□□□ -0.88
SCAF4-206ENST00000485790 GSN-AS1Q9NRJ2 163 aa9.56□□□□□ -0.88
SCAF4-206ENST00000485790 PKHD1P08F94 4074 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 RYR1P21817 5038 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 IGSF23A1L1A6 192 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 ZNF324O75467 553 aaPredicted RBP9.55□□□□□ -0.88
SCAF4-206ENST00000485790 CDK2AP2O75956 126 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 NBEAP1P0C6P0 100 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 IL15RAQ13261 267 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 C9orf47Q6ZRZ4 202 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 Q6ZTI0 123 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 C18orf15Q96N68 181 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 Q9H3A6 140 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 KCNIP2Q9NS61 270 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 MRPS16Q9Y3D3 137 aaKnown RBP9.55□□□□□ -0.88
SCAF4-206ENST00000485790 DNAH11Q96DT5 4516 aa9.55□□□□□ -0.88
SCAF4-206ENST00000485790 TRGV1A0A0A0MS02 117 aa9.54□□□□□ -0.88
SCAF4-206ENST00000485790 E5RGE8 158 aa9.54□□□□□ -0.88
SCAF4-206ENST00000485790 M0R3E3 92 aa9.54□□□□□ -0.88
SCAF4-206ENST00000485790 RGS13O14921 159 aa9.54□□□□□ -0.88
SCAF4-206ENST00000485790 CSN1S1P47710 185 aa9.54□□□□□ -0.88
SCAF4-206ENST00000485790 CYCSP99999 105 aaKnown RBP9.54□□□□□ -0.88
SCAF4-206ENST00000485790 ICAM4Q14773 271 aa9.54□□□□□ -0.88
SCAF4-206ENST00000485790 LINC00299Q6ZSB3 139 aa9.54□□□□□ -0.88
SCAF4-206ENST00000485790 NPCDR1Q9BY65 106 aa9.54□□□□□ -0.88
SCAF4-206ENST00000485790 TMPRSS5Q9H3S3 457 aa9.54□□□□□ -0.88
SCAF4-206ENST00000485790 FUT9Q9Y231 359 aa9.54□□□□□ -0.88
SCAF4-206ENST00000485790 KLLNB2CW77 178 aa9.53□□□□□ -0.88
SCAF4-206ENST00000485790 NDUFB4O95168 129 aa9.53□□□□□ -0.88
SCAF4-206ENST00000485790 PYYP10082 97 aa9.53□□□□□ -0.88
SCAF4-206ENST00000485790 CD300CQ08708 224 aa9.53□□□□□ -0.88
SCAF4-206ENST00000485790 EXOC3-AS1Q8N2X6 119 aa9.53□□□□□ -0.88
SCAF4-206ENST00000485790 S100ZQ8WXG8 99 aa9.53□□□□□ -0.88
SCAF4-206ENST00000485790 OR51M1Q9H341 326 aa9.53□□□□□ -0.88
SCAF4-206ENST00000485790 C17orf112F2Z3M2 114 aa9.52□□□□□ -0.89
SCAF4-206ENST00000485790 PAX4O43316 350 aa9.52□□□□□ -0.89
SCAF4-206ENST00000485790 CRISP2P16562 243 aa9.52□□□□□ -0.89
SCAF4-206ENST00000485790 NHLH2Q02577 135 aa9.52□□□□□ -0.89
SCAF4-206ENST00000485790 FAM122CQ6P4D5 195 aa9.52□□□□□ -0.89
SCAF4-206ENST00000485790 SPATA12Q7Z6I5 190 aa9.52□□□□□ -0.89
SCAF4-206ENST00000485790 OR5C1Q8NGR4 320 aa9.52□□□□□ -0.89
SCAF4-206ENST00000485790 FAM19A4Q96LR4 140 aa9.52□□□□□ -0.89
SCAF4-206ENST00000485790 ARPC5LQ9BPX5 153 aa9.52□□□□□ -0.89
SCAF4-206ENST00000485790 DYNC1H1Q14204 4646 aaKnown RBP9.52□□□□□ -0.89
SCAF4-206ENST00000485790 IGHV1OR15-1A0A075B7D0 117 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 TRAV9-2A0A087WT02 112 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 TRBV7-9A0A0J9YWB2 115 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 EREGO14944 169 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 SPINK4O60575 86 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 ZNF138P52744 262 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 BTN1A1Q13410 526 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 IBA57Q5T440 356 aaKnown RBP9.51□□□□□ -0.89
SCAF4-206ENST00000485790 THAP6Q8TBB0 222 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 PAXXQ9BUH6 204 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 MRPL32Q9BYC8 188 aaKnown RBP9.51□□□□□ -0.89
SCAF4-206ENST00000485790 ZNF492Q9P255 531 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 PRO0255Q9UI72 69 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 HHLA3Q9XRX5 114 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 KLF12Q9Y4X4 402 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 ICOSQ9Y6W8 199 aa9.51□□□□□ -0.89
SCAF4-206ENST00000485790 A0A096LPF7 62 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 SIVA1O15304 175 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 TCL1AP56279 114 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 ASAH1Q13510 395 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 GCSAMLQ5JQS6 135 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 MIR17HGQ75NE6 70 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 LYPD1Q8N2G4 141 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 MAPKAPK5-AS1Q8N8E1 139 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 C11orf72Q8NBR9 251 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 ENKURQ8TC29 256 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 VSIG2Q96IQ7 327 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 ST6GAL2Q96JF0 529 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 SLC25A2Q9BXI2 301 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 NMES1Q9C002 83 aa9.5□□□□□ -0.89
SCAF4-206ENST00000485790 IGKV2-40A0A087WW87 121 aaPredicted RBP9.49□□□□□ -0.89
SCAF4-206ENST00000485790 IGKV2D-40P01614 121 aaPredicted RBP9.49□□□□□ -0.89
SCAF4-206ENST00000485790 RANP62826 216 aaKnown RBP9.49□□□□□ -0.89
SCAF4-206ENST00000485790 MRPL23Q16540 153 aaKnown RBP9.49□□□□□ -0.89
SCAF4-206ENST00000485790 SCGB1C1Q8TD33 95 aa9.49□□□□□ -0.89
SCAF4-206ENST00000485790 VGLL1Q99990 258 aa9.49□□□□□ -0.89
SCAF4-206ENST00000485790 PGPEP1Q9NXJ5 209 aa9.49□□□□□ -0.89
SCAF4-206ENST00000485790 OR7C2O60412 319 aa9.48□□□□□ -0.89
SCAF4-206ENST00000485790 PRAF2O60831 178 aa9.48□□□□□ -0.89
SCAF4-206ENST00000485790 SIX6O95475 246 aa9.48□□□□□ -0.89
SCAF4-206ENST00000485790 IFNA5P01569 189 aa9.48□□□□□ -0.89
SCAF4-206ENST00000485790 OR10J4P0C629 311 aa9.48□□□□□ -0.89
SCAF4-206ENST00000485790 LRRC37A5PQ49AS3 106 aa9.48□□□□□ -0.89
SCAF4-206ENST00000485790 NFE4Q86UQ8 179 aa9.48□□□□□ -0.89
SCAF4-206ENST00000485790 ZFAND2AQ8N6M9 145 aa9.48□□□□□ -0.89
SCAF4-206ENST00000485790 FAM167A-AS1Q96KT0 104 aa9.48□□□□□ -0.89
SCAF4-206ENST00000485790 WDR61Q9GZS3 305 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms