RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 TUSC5Q8IXB3 177 aa4.42□□□□□ -1.7
SGIP1-210ENST00000483060 SLC22A18ASQ8N1D0 253 aa4.42□□□□□ -1.7
SGIP1-210ENST00000483060 C15orf53Q8NAA6 179 aa4.42□□□□□ -1.7
SGIP1-210ENST00000483060 TMEM116Q8NCL8 245 aa4.42□□□□□ -1.7
SGIP1-210ENST00000483060 ZNRF2Q8NHG8 242 aa4.42□□□□□ -1.7
SGIP1-210ENST00000483060 SRSF8Q9BRL6 282 aaKnown RBP4.42□□□□□ -1.7
SGIP1-210ENST00000483060 PRRG4Q9BZD6 226 aa4.42□□□□□ -1.7
SGIP1-210ENST00000483060 LINC00574Q9H8X3 128 aa4.42□□□□□ -1.7
SGIP1-210ENST00000483060 NDUFA4L2Q9NRX3 87 aa4.42□□□□□ -1.7
SGIP1-210ENST00000483060 F11RQ9Y624 299 aaKnown RBP4.42□□□□□ -1.7
SGIP1-210ENST00000483060 NCOA6Q14686 2063 aaPredicted RBP4.42□□□□□ -1.7
SGIP1-210ENST00000483060 MYO7BQ6PIF6 2116 aa4.42□□□□□ -1.7
SGIP1-210ENST00000483060 NCKAP5O14513 1909 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 IGKV1OR2-108A0A075B7D4 117 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 LOC107984156A0A0G2JMH3 177 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 SMIM9A6NGZ8 99 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 H3BT86 120 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 SLC25A20O43772 301 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 CXCL13O43927 109 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 SCGB2A1O75556 95 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 FSTL3O95633 263 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 IGHV4-34P06331 123 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 COX6CP09669 75 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 ARMS2P0C7Q2 107 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 MYOD1P15172 320 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 PRTN3P24158 256 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 ACP1P24666 158 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 CXCL5P42830 114 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 ZNF138P52744 262 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 GFERP55789 205 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 B3GALT5-AS1P59052 145 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 DEFB103AP81534 67 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 TNFAIP6P98066 277 aaPredicted RBP4.41□□□□□ -1.7
SGIP1-210ENST00000483060 SRSF9Q13242 221 aaKnown RBP eCLIP4.41□□□□□ -1.7
SGIP1-210ENST00000483060 LAGE3Q14657 143 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 MRPL51Q4U2R6 128 aaKnown RBP4.41□□□□□ -1.7
SGIP1-210ENST00000483060 NFE4Q86UQ8 179 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 ARL17AQ8IVW1 177 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 C10orf126Q8N4M7 172 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 ANKRD29Q8N6D5 301 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 TMEM167AQ8TBQ9 72 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 TIMD4Q96H15 378 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 SRXN1Q9BYN0 137 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 HIGD1AQ9Y241 93 aa4.41□□□□□ -1.7
SGIP1-210ENST00000483060 ARHGAP21Q5T5U3 1957 aa4.4□□□□□ -1.7
SGIP1-210ENST00000483060 IGHV3-15A0A0B4J1V0 119 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 TRAV2A0A0B4J234 112 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 A0A0B4J2C4 111 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 RBP4P02753 201 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 PATE4P0C8F1 98 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 PYYP10082 97 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 GP9P14770 177 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 CD27P26842 260 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 LEPP41159 167 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 INSL3P51460 131 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 C1orf61Q13536 156 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 EDDM3AQ14507 147 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 C3AR1Q16581 482 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 SPRNQ5BIV9 151 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 DEFB121Q5J5C9 76 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 PATE2Q6UY27 113 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 C8orf31Q8N9H6 132 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 FGFBP3Q8TAT2 258 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 RASL10AQ92737 203 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 ZC2HC1AQ96GY0 325 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 IMMP1LQ96LU5 166 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 CARD19Q96LW7 228 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 FOXC2Q99958 501 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 PRADC1Q9BSG0 188 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 RNF186Q9NXI6 227 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 PRO1854Q9UHT4 67 aa4.4□□□□□ -1.71
SGIP1-210ENST00000483060 CSDC2Q9Y534 153 aaKnown RBP4.4□□□□□ -1.71
SGIP1-210ENST00000483060 TIMM8BQ9Y5J9 83 aaPredicted RBP4.4□□□□□ -1.71
SGIP1-210ENST00000483060 IGHV3OR15-7A0A075B7D8 119 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 A0A087WYN8 130 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 IGHV1-69DA0A0B4J2H0 117 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 TRBV10-2A0A0K0K1G8 114 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 K7ERJ3 54 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 SCRG1O75711 98 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 CRYGBP07316 175 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 PRDX2P32119 198 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 IL11RAQ14626 422 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 VMA21Q3ZAQ7 101 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 LYZL1Q6UWQ5 148 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 SCGB1D4Q6XE38 83 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 LINC00322Q6ZN03 302 aaPredicted RBP4.39□□□□□ -1.71
SGIP1-210ENST00000483060 PRNTQ86SH4 94 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 NDUFA11Q86Y39 141 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 C3orf22Q8N5N4 141 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 UBALD1Q8TB05 177 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 LINC00526Q96FQ7 95 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 MCRIP2Q9BUT9 160 aaKnown RBP4.39□□□□□ -1.71
SGIP1-210ENST00000483060 GTF3C1Q12789 2109 aa4.39□□□□□ -1.71
SGIP1-210ENST00000483060 IGKV2D-26A0A0A0MRZ7 120 aa4.38□□□□□ -1.71
SGIP1-210ENST00000483060 TRAV3A0A0B4J244 114 aa4.38□□□□□ -1.71
SGIP1-210ENST00000483060 TRAV40A0A0B4J280 105 aa4.38□□□□□ -1.71
SGIP1-210ENST00000483060 IGHV3-20A0A0C4DH32 117 aa4.38□□□□□ -1.71
SGIP1-210ENST00000483060 TRBV30A0A0K0K1B3 111 aa4.38□□□□□ -1.71
SGIP1-210ENST00000483060 LOC389332A0A1B0GUA5 103 aa4.38□□□□□ -1.71
SGIP1-210ENST00000483060 H3BMM0 161 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms