RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 SHANK2Q9UPX8 1470 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 ERC2-IT1O76042 136 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 GPX1P07203 203 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 SAA1P0DJI8 122 aaPredicted RBP2.41□□□□□ -2.02
COPA-203ENST00000481040 QRFPP83859 136 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 CIRBPQ14011 172 aaKnown RBP2.41□□□□□ -2.02
COPA-203ENST00000481040 C10orf55Q5SWW7 151 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 HAGHLQ6PII5 290 aaPredicted RBP2.41□□□□□ -2.02
COPA-203ENST00000481040 C2orf82Q6UX34 121 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 VPS25Q9BRG1 176 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 BAHCC1Q9P281 2608 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 ADCY10Q96PN6 1610 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 MAP3K4Q9Y6R4 1608 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 PDE4DIPQ5VU43 2346 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 SCN3AQ9NY46 2000 aa2.41□□□□□ -2.02
COPA-203ENST00000481040 TTC37Q6PGP7 1564 aa2.4□□□□□ -2.02
COPA-203ENST00000481040 MGAMO43451 1857 aa2.4□□□□□ -2.03
COPA-203ENST00000481040 ZFHX4Q86UP3 3567 aa2.4□□□□□ -2.03
COPA-203ENST00000481040 A0A096LPI6 279 aa2.4□□□□□ -2.03
COPA-203ENST00000481040 TRBV6-5A0A0K0K1A5 114 aa2.4□□□□□ -2.03
COPA-203ENST00000481040 ZNF727A8MUV8 499 aa2.4□□□□□ -2.03
COPA-203ENST00000481040 C5orf67F2Z3F1 127 aa2.4□□□□□ -2.03
COPA-203ENST00000481040 CD2P06729 351 aa2.4□□□□□ -2.03
COPA-203ENST00000481040 LSM3P62310 102 aaKnown RBP2.4□□□□□ -2.03
COPA-203ENST00000481040 TNS3Q68CZ2 1445 aa2.4□□□□□ -2.03
COPA-203ENST00000481040 VWDEQ8N2E2 1590 aa2.4□□□□□ -2.03
COPA-203ENST00000481040 PEG3Q9GZU2 1588 aa2.4□□□□□ -2.03
COPA-203ENST00000481040 KIAA1549Q9HCM3 1950 aa2.4□□□□□ -2.03
COPA-203ENST00000481040 PLXNA4Q9HCM2 1894 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 EPRSP07814 1512 aaKnown RBP2.39□□□□□ -2.03
COPA-203ENST00000481040 KIAA0586Q9BVV6 1533 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 LOC107986453A0A1B0GWG9 222 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 SMIM24O75264 130 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 TRACP01848 142 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 SLC25A4P12235 298 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 BLCAPP62952 87 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 DEFB103AP81534 67 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 SPCS2Q15005 226 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 ZNF833PQ6ZTB9 187 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 OR5AK2Q8NH90 309 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 Q8TAT8 98 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 PSMF1Q92530 271 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 NABP2Q9BQ15 211 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 COL5A3P25940 1745 aaPredicted RBP2.39□□□□□ -2.03
COPA-203ENST00000481040 KMT2BQ9UMN6 2715 aaPredicted RBP2.39□□□□□ -2.03
COPA-203ENST00000481040 SHROOM2Q13796 1616 aa2.39□□□□□ -2.03
COPA-203ENST00000481040 CEP192Q8TEP8 1941 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 SZT2Q5T011 3432 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 COL6A3P12111 3177 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 J3QR89 54 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 KDM6AO15550 1401 aaPredicted RBP2.38□□□□□ -2.03
COPA-203ENST00000481040 CXCL8P10145 99 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 RNASE3P12724 160 aaKnown RBP2.38□□□□□ -2.03
COPA-203ENST00000481040 KDM5CP41229 1560 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 AKR1D1P51857 326 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 DIAPH2-AS1Q14236 149 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 COL24A1Q17RW2 1714 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 C4orf3Q8WVX3 66 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 ZCCHC13Q8WW36 166 aaKnown RBP2.38□□□□□ -2.03
COPA-203ENST00000481040 SPTBN5Q9NRC6 3674 aaKnown RBP2.38□□□□□ -2.03
COPA-203ENST00000481040 TNFSF18Q9UNG2 199 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 TEX14Q8IWB6 1497 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 FANCD2Q9BXW9 1451 aa2.38□□□□□ -2.03
COPA-203ENST00000481040 COL5A1P20908 1838 aaPredicted RBP2.38□□□□□ -2.03
COPA-203ENST00000481040 VCANP13611 3396 aa2.37□□□□□ -2.03
COPA-203ENST00000481040 DISP2A7MBM2 1401 aa2.37□□□□□ -2.03
COPA-203ENST00000481040 TRBV6-8A0A0A6YYG3 113 aa2.37□□□□□ -2.03
COPA-203ENST00000481040 C9orf170A2RU37 121 aa2.37□□□□□ -2.03
COPA-203ENST00000481040 TSPAN19P0C672 248 aa2.37□□□□□ -2.03
COPA-203ENST00000481040 IGLC6P0CF74 106 aa2.37□□□□□ -2.03
COPA-203ENST00000481040 CCL4P13236 92 aa2.37□□□□□ -2.03
COPA-203ENST00000481040 CNBPP62633 177 aaKnown RBP2.37□□□□□ -2.03
COPA-203ENST00000481040 TMEM91Q6ZNR0 172 aa2.37□□□□□ -2.03
COPA-203ENST00000481040 MMGT1Q8N4V1 131 aa2.37□□□□□ -2.03
COPA-203ENST00000481040 COL1A1P02452 1464 aaPredicted RBP2.37□□□□□ -2.03
COPA-203ENST00000481040 MYH1P12882 1939 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 NWD1Q149M9 1564 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 TRGV2A0A075B6R0 118 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 CCDC160A6NGH7 325 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 K7EP13 123 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 HYPMO75409 117 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 LINC00694P0DN24 101 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 HLA-DRB4P13762 266 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 HIST1H1BP16401 226 aaKnown RBP2.36□□□□□ -2.03
COPA-203ENST00000481040 NCS1P62166 190 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 SNRPD3P62318 126 aaKnown RBP2.36□□□□□ -2.03
COPA-203ENST00000481040 GLIPR1L1Q6UWM5 242 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 OR5AS1Q8N127 324 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 LINC00269Q8N2A0 174 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 OR4C6Q8NH72 309 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 REG4Q9BYZ8 158 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 CST11Q9H112 138 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 HLA-DRB4X5D2U9 266 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 PCNX2A6NKB5 2137 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 UNC80Q8N2C7 3258 aa2.36□□□□□ -2.03
COPA-203ENST00000481040 TARBP1Q13395 1621 aaKnown RBP2.35□□□□□ -2.03
COPA-203ENST00000481040 PRG4Q92954 1404 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms