RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 RPUSD4Q96CM3 377 aaKnown RBP3.88□□□□□ -1.79
LINC02040-201ENST00000481004 GPR82Q96P67 336 aa3.88□□□□□ -1.79
LINC02040-201ENST00000481004 NIPSNAP3BQ9BS92 247 aa3.88□□□□□ -1.79
LINC02040-201ENST00000481004 CCDC32Q9BV29 185 aa3.88□□□□□ -1.79
LINC02040-201ENST00000481004 LYRM2Q9NU23 88 aaPredicted RBP3.88□□□□□ -1.79
LINC02040-201ENST00000481004 GOLT1BQ9Y3E0 138 aa3.88□□□□□ -1.79
LINC02040-201ENST00000481004 HSPG2P98160 4391 aa3.88□□□□□ -1.79
LINC02040-201ENST00000481004 RYR1P21817 5038 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 IGLV2-18A0A075B6J9 118 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 UBE2L5PA0A1B0GUS4 154 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 C5orf51A6NDU8 294 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 CENPXA8MT69 81 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 GOSR2O14653 212 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 NDUFB4O95168 129 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 INSP01308 110 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 HBE1P02100 147 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 CT45A10P0DMU9 189 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 HTN3P15516 51 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 RPL7P18124 248 aaKnown RBP3.87□□□□□ -1.79
LINC02040-201ENST00000481004 CAMLGP49069 296 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 CAV2P51636 162 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 H2BFSP57053 126 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 ZNF846Q147U1 533 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 OXA1LQ15070 435 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 RRN3P1Q2M238 152 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 GFI1BQ5VTD9 330 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 ZNF546Q86UE3 836 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 TMEM252Q8N6L7 170 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 POM121L12Q8N7R1 296 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 RNASE8Q8TDE3 154 aaKnown RBP3.87□□□□□ -1.79
LINC02040-201ENST00000481004 FAM167A-AS1Q96KT0 104 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 C2orf50Q96LR7 162 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 NDUFAF3Q9BU61 184 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 GGACTQ9BVM4 153 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 ZNF586Q9NXT0 402 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 OR5AC2Q9NZP5 309 aa3.87□□□□□ -1.79
LINC02040-201ENST00000481004 TMEM189A5PLL7 270 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 M0R3E3 92 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 COX7A2P2O60397 106 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 EIF3GO75821 320 aaKnown RBP eCLIP3.86□□□□□ -1.79
LINC02040-201ENST00000481004 UPK1BO75841 260 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 DUSP14O95147 198 aaKnown RBP3.86□□□□□ -1.79
LINC02040-201ENST00000481004 DEFB130BP0DP73 79 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 DEFB130AP0DP74 79 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 PYYP10082 97 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 TSPOP30536 169 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 SULT1A1P50225 295 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 BCAP31P51572 246 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 S100A10P60903 97 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 ERCC8Q13216 396 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 PRR9Q5T870 116 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 SAMD13Q5VXD3 122 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 C10orf113Q5VZT2 155 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 LINC00612Q8N6U2 182 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 FAM19A4Q96LR4 140 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 SLC25A2Q9BXI2 301 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 KRTAP1-5Q9BYS1 174 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 DNAJC4Q9NNZ3 241 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 SLC39A9Q9NUM3 307 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 UQCC1Q9NVA1 299 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 PXMP4Q9Y6I8 212 aa3.86□□□□□ -1.79
LINC02040-201ENST00000481004 DNAH5Q8TE73 4624 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 LRP1BQ9NZR2 4599 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 TRBV19A0A075B6N1 114 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 FAM240BA0A1B0GVZ2 78 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 L7N2F9 121 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 P0DMU3 169 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 FAM231AP0DMU4 169 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 FAM231CP0DMU5 169 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 CXCL2P19875 107 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 FGF7P21781 194 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 RPL29P47914 159 aaKnown RBP3.85□□□□□ -1.79
LINC02040-201ENST00000481004 DAD1P61803 113 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 RHOBP62745 196 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 VAMP2P63027 116 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 LCN15Q6UWW0 184 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 EXOC3-AS1Q8N2X6 119 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 THAP6Q8TBB0 222 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 ZNF479Q96JC4 524 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 TMEM208Q9BTX3 173 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 NPCDR1Q9BY65 106 aa3.85□□□□□ -1.79
LINC02040-201ENST00000481004 APOBP04114 4563 aaKnown RBP3.85□□□□□ -1.79
LINC02040-201ENST00000481004 IGKV2-40A0A087WW87 121 aaPredicted RBP3.84□□□□□ -1.79
LINC02040-201ENST00000481004 TRAV12-3A0A0B4J271 114 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 LYRM9A8MSI8 78 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 J3KRW8 73 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 IGKV2D-40P01614 121 aaPredicted RBP3.84□□□□□ -1.79
LINC02040-201ENST00000481004 HTN1P15515 57 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 S100A11P31949 105 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 CDKN1BP46527 198 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 TAS2R60P59551 318 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 B2MP61769 119 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 BAXQ07812 192 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 CD300CQ08708 224 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 BTN1A1Q13410 526 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 CLINT1Q14677 625 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 LGALS9BQ3B8N2 356 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 LRRC37A5PQ49AS3 106 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 MIR17HGQ75NE6 70 aa3.84□□□□□ -1.79
LINC02040-201ENST00000481004 BPIFA4PQ86YQ2 179 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms