RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 LINC01556Q5JQF7 62 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 C1orf100Q5SVJ3 147 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 C1orf146Q5VVC0 180 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 TMPRSS11AQ6ZMR5 421 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 WFDC10BQ8IUB3 73 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 DHRSXQ8N5I4 330 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 OR4D5Q8NGN0 318 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 OR4X1Q8NH49 305 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 SMIM19Q96E16 107 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 ARHGAP5-AS1Q96IT6 56 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 C20orf144Q9BQM9 153 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 PECRQ9BY49 303 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 LPAR5Q9H1C0 372 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 COMMD9Q9P000 198 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 VAX2Q9UIW0 290 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 HHLA3Q9XRX5 114 aa2.64□□□□□ -1.99
VPS50-214ENST00000477935 TRAV8-3A0A0A6YYJ7 113 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 METTL21EPA6NDL7 271 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 M0R2Z0 102 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 TAAR5O14804 337 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 SRIP30626 198 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 TALDO1P37837 337 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 SNCAP37840 140 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 RPL5P46777 297 aaKnown RBP2.63□□□□□ -1.99
VPS50-214ENST00000477935 PPT1P50897 306 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 DEFB1P60022 68 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 YPEL3P61236 119 aaPredicted RBP2.63□□□□□ -1.99
VPS50-214ENST00000477935 RPS11P62280 158 aaKnown RBP eCLIP2.63□□□□□ -1.99
VPS50-214ENST00000477935 ARL6IP1Q15041 203 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 C1orf194Q5T5A4 169 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 DEFB107AQ8IZN7 70 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 NKAPP1Q8N9T2 125 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 OR11H7Q8NGC8 314 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 LGALS14Q8TCE9 139 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 ATP6V1G3Q96LB4 118 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 DERL3Q96Q80 235 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 TXNDC17Q9BRA2 123 aa2.63□□□□□ -1.99
VPS50-214ENST00000477935 TRAV8-1A0A0A6YYK1 113 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 TRAV8-6A0A0B4J262 113 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 F6UB75 175 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 INS-IGF2F8WCM5 200 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 G3V2T6 193 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 BOLA2-SMG1P6H3BVE0 249 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 SULT1C2O00338 296 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 IGKV1-17P01599 117 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 ORM1P02763 201 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 NFYAP23511 347 aaPredicted RBP2.62□□□□□ -1.99
VPS50-214ENST00000477935 PSMB9P28065 219 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 BTCP35070 178 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 CRYBA4P53673 196 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 HSPE1P61604 102 aaKnown RBP2.62□□□□□ -1.99
VPS50-214ENST00000477935 WFDC2Q14508 124 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 SPCS2Q15005 226 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 PSG3Q16557 428 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 CNIH2Q6PI25 160 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 SPINK6Q6UWN8 80 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 OR1S2Q8NGQ3 325 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 ATP6V0E2Q8NHE4 81 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 CANT1Q8WVQ1 401 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 BORCS5Q969J3 196 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 MRPL32Q9BYC8 188 aaKnown RBP2.62□□□□□ -1.99
VPS50-214ENST00000477935 C20orf85Q9H1P6 137 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 VCXQ9H320 206 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 SLC25A22Q9H936 323 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 RPH3ALQ9UNE2 315 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 V9GY05 133 aa2.62□□□□□ -1.99
VPS50-214ENST00000477935 TRAV12-2A0A075B6T6 113 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 IGKV1D-13A0A0B4J2D9 117 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 K7EQM0 130 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 LECT2O14960 151 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 KRASP01116 189 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 IL4P05112 153 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 LIMS3P0CW19 117 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 LIMS4P0CW20 117 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 RD3LP0DJH9 198 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 IGKV1-13P0DP09 117 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 DTYMKP23919 212 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 GADD45AP24522 165 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 F2RP25116 425 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 OPRK1P41145 380 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 OR2F1Q13607 317 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 IDNKQ5T6J7 187 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 HES5Q5TA89 166 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 XAF1Q6GPH4 301 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 Q6ZTI0 123 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 LINC01551Q86U37 167 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 BAP18Q8IXM2 172 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 BPIFB6Q8NFQ5 453 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 OR51G1Q8NGK1 321 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 BAALCQ8WXS3 180 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 GPR146Q96CH1 333 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 RMI2Q96E14 147 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 RNF185Q96GF1 192 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 GABARAPL3Q9BY60 117 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 SH3BGRL3Q9H299 93 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 CCL28Q9NRJ3 127 aa2.61□□□□□ -1.99
VPS50-214ENST00000477935 IGKV2-28A0A075B6P5 120 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 A0A075B6Q4 140 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 TRAV26-2A0A0B4J265 109 aa2.6□□□□□ -1.99
VPS50-214ENST00000477935 FKBP6O75344 327 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms