RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 HS3ST6Q96QI5 342 aa11.48□□□□□ -0.57
SSPO-205ENST00000475488 SYS1-DBNDD2H3BUS1 97 aa11.48□□□□□ -0.57
SSPO-205ENST00000475488 C8orf86Q6ZUL3 223 aa11.48□□□□□ -0.57
SSPO-205ENST00000475488 VWA8A3KMH1 1905 aa11.48□□□□□ -0.57
SSPO-205ENST00000475488 IGKV1D-17A0A075B6S4 117 aa11.48□□□□□ -0.57
SSPO-205ENST00000475488 Q6ZS92 163 aa11.48□□□□□ -0.57
SSPO-205ENST00000475488 SHANK2-AS3Q9BTD1 123 aa11.48□□□□□ -0.57
SSPO-205ENST00000475488 ZC2HC1BQ5TFG8 222 aa11.48□□□□□ -0.57
SSPO-205ENST00000475488 NCOR1O75376 2440 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 HIST1H2BKO60814 126 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 PRB1P04280 392 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 HIST1H2BJP06899 126 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 HIST1H2BOP23527 126 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 HIST1H2BBP33778 126 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 HIST1H2BDP58876 126 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 HIST1H2BCP62807 126 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 HIST2H2BEQ16778 126 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.47□□□□□ -0.57
SSPO-205ENST00000475488 HIST1H2BHQ93079 126 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 HIST1H2BNQ99877 126 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 HIST1H2BMQ99879 126 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 CRYGCP07315 174 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 ACACAQ13085 2346 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 ZNF134P52741 427 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 KLK5Q9Y337 293 aaPredicted RBP11.47□□□□□ -0.57
SSPO-205ENST00000475488 G3V318 75 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 TRACP01848 142 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 STPG4Q8N801 248 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 GTSF1LQ9H1H1 148 aa11.47□□□□□ -0.57
SSPO-205ENST00000475488 IGKV1-12A0A0C4DH73 117 aa11.46□□□□□ -0.57
SSPO-205ENST00000475488 IGKV1D-12P01611 117 aa11.46□□□□□ -0.57
SSPO-205ENST00000475488 UBE2AP49459 152 aa11.46□□□□□ -0.57
SSPO-205ENST00000475488 HERVK_113P63121 156 aa11.46□□□□□ -0.57
SSPO-205ENST00000475488 LINC00473A8K010 186 aa11.46□□□□□ -0.57
SSPO-205ENST00000475488 F8W735 103 aaPredicted RBP11.46□□□□□ -0.57
SSPO-205ENST00000475488 NDUFA4O00483 81 aa11.46□□□□□ -0.57
SSPO-205ENST00000475488 ZNF124Q15973 351 aa11.46□□□□□ -0.57
SSPO-205ENST00000475488 IGKV1-27A0A075B6S5 117 aa11.46□□□□□ -0.58
SSPO-205ENST00000475488 TINCRA0A1B0GVN0 87 aa11.46□□□□□ -0.58
SSPO-205ENST00000475488 Q86TA4 180 aa11.46□□□□□ -0.58
SSPO-205ENST00000475488 COL4A5P29400 1685 aa11.46□□□□□ -0.58
SSPO-205ENST00000475488 IGKV1D-8A0A087WSZ0 117 aa11.46□□□□□ -0.58
SSPO-205ENST00000475488 ADAMTSL5Q6ZMM2 481 aa11.46□□□□□ -0.58
SSPO-205ENST00000475488 CFHR4Q92496 578 aa11.46□□□□□ -0.58
SSPO-205ENST00000475488 ZNF362Q5T0B9 420 aaPredicted RBP11.45□□□□□ -0.58
SSPO-205ENST00000475488 PFN1P07737 140 aaKnown RBP11.45□□□□□ -0.58
SSPO-205ENST00000475488 Q6P435 159 aa11.45□□□□□ -0.58
SSPO-205ENST00000475488 LINC00205P59089 165 aa11.45□□□□□ -0.58
SSPO-205ENST00000475488 SEC61GP60059 68 aa11.45□□□□□ -0.58
SSPO-205ENST00000475488 RHOHQ15669 191 aa11.45□□□□□ -0.58
SSPO-205ENST00000475488 IGKV1-16P04430 117 aa11.45□□□□□ -0.58
SSPO-205ENST00000475488 GFRA4Q9GZZ7 299 aa11.45□□□□□ -0.58
SSPO-205ENST00000475488 ZNRD1Q9P1U0 126 aa11.45□□□□□ -0.58
SSPO-205ENST00000475488 TMEM258P61165 79 aa11.44□□□□□ -0.58
SSPO-205ENST00000475488 TRAV26-2A0A0B4J265 109 aa11.44□□□□□ -0.58
SSPO-205ENST00000475488 A0A1W2PPI3 338 aa11.44□□□□□ -0.58
SSPO-205ENST00000475488 MESP1Q9BRJ9 268 aa11.44□□□□□ -0.58
SSPO-205ENST00000475488 SHISA3A0PJX4 238 aa11.44□□□□□ -0.58
SSPO-205ENST00000475488 RNASE13Q5GAN3 156 aaKnown RBP11.44□□□□□ -0.58
SSPO-205ENST00000475488 IGHV4-28A0A0C4DH34 117 aa11.44□□□□□ -0.58
SSPO-205ENST00000475488 UTF1Q5T230 341 aa11.44□□□□□ -0.58
SSPO-205ENST00000475488 NDUFB1O75438 58 aa11.43□□□□□ -0.58
SSPO-205ENST00000475488 TEX36Q5VZQ5 186 aa11.43□□□□□ -0.58
SSPO-205ENST00000475488 MRPL52Q86TS9 123 aaKnown RBP11.43□□□□□ -0.58
SSPO-205ENST00000475488 MRPL27Q9P0M9 148 aaKnown RBP11.43□□□□□ -0.58
SSPO-205ENST00000475488 SHISA9B4DS77 424 aa11.43□□□□□ -0.58
SSPO-205ENST00000475488 MLANAQ16655 118 aa11.43□□□□□ -0.58
SSPO-205ENST00000475488 HIST1H2BLQ99880 126 aa11.43□□□□□ -0.58
SSPO-205ENST00000475488 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
SSPO-205ENST00000475488 LINC01551Q86U37 167 aa11.43□□□□□ -0.58
SSPO-205ENST00000475488 BAALCQ8WXS3 180 aa11.43□□□□□ -0.58
SSPO-205ENST00000475488 TNRC6AQ8NDV7 1962 aaKnown RBP11.43□□□□□ -0.58
SSPO-205ENST00000475488 FNDC10F2Z333 226 aa11.43□□□□□ -0.58
SSPO-205ENST00000475488 TMEM14BQ9NUH8 114 aa11.43□□□□□ -0.58
SSPO-205ENST00000475488 KIAA1671Q9BY89 1806 aa11.43□□□□□ -0.58
SSPO-205ENST00000475488 FGF6P10767 208 aa11.42□□□□□ -0.58
SSPO-205ENST00000475488 TMEM213A2RRL7 107 aa11.42□□□□□ -0.58
SSPO-205ENST00000475488 NMSQ5H8A3 153 aa11.42□□□□□ -0.58
SSPO-205ENST00000475488 PRSS46E5RG02 174 aa11.42□□□□□ -0.58
SSPO-205ENST00000475488 UBE2CO00762 179 aa11.42□□□□□ -0.58
SSPO-205ENST00000475488 FUSP35637 526 aaKnown RBP eCLIP11.42□□□□□ -0.58
SSPO-205ENST00000475488 FLVCR1-AS1Q8TAF5 88 aa11.42□□□□□ -0.58
SSPO-205ENST00000475488 CXCL1P09341 107 aa11.42□□□□□ -0.58
SSPO-205ENST00000475488 HGFACQ04756 655 aa11.42□□□□□ -0.58
SSPO-205ENST00000475488 A0A087WV48 116 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 SDHAF1A6NFY7 115 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 C9orf47Q6ZRZ4 202 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 PLXNA3P51805 1871 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 TNRC6BQ9UPQ9 1833 aaKnown RBP11.41□□□□□ -0.58
SSPO-205ENST00000475488 MRPL36Q9P0J6 103 aaKnown RBP11.41□□□□□ -0.58
SSPO-205ENST00000475488 TANC2Q9HCD6 1990 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 C1orf194Q5T5A4 169 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 C2orf66Q6UXQ4 117 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 C15orf53Q8NAA6 179 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 MRPL53Q96EL3 112 aaKnown RBP11.41□□□□□ -0.58
SSPO-205ENST00000475488 IGHV3-30P01768 117 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 IGHV3-33P01772 117 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 IGHV3-30-3P0DP02 117 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 IGHV3-30-5P0DP03 117 aa11.41□□□□□ -0.58
SSPO-205ENST00000475488 FANCD2OSQ96PS1 177 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms