RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 NDUFB4O95168 129 aa9.35□□□□□ -0.91
CHD3-209ENST00000473376 TCL1AP56279 114 aa9.35□□□□□ -0.91
CHD3-209ENST00000473376 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
CHD3-209ENST00000473376 TRGV2A0A075B6R0 118 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 A0A096LPF7 62 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 A0A0J9YY99 117 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 H3BTX0 84 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 CCSO14618 274 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 SNRPCP09234 159 aaKnown RBP9.34□□□□□ -0.91
CHD3-209ENST00000473376 BAXQ07812 192 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 Q6ZTI0 123 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 Q8N1X5 172 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 VSIG2Q96IQ7 327 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
CHD3-209ENST00000473376 KRTAP4-5Q9BYR2 181 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 KRTAP1-5Q9BYS1 174 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 AGPAT4-IT1Q9H0P7 198 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 TMPRSS5Q9H3S3 457 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 KCNIP2Q9NS61 270 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 TIMM9Q9Y5J7 89 aa9.34□□□□□ -0.91
CHD3-209ENST00000473376 TRAV6A0A075B6T7 132 aa9.33□□□□□ -0.92
CHD3-209ENST00000473376 UBE2L5PA0A1B0GUS4 154 aa9.33□□□□□ -0.92
CHD3-209ENST00000473376 SPATA12Q7Z6I5 190 aa9.33□□□□□ -0.92
CHD3-209ENST00000473376 MAPKAPK5-AS1Q8N8E1 139 aa9.33□□□□□ -0.92
CHD3-209ENST00000473376 ST6GAL2Q96JF0 529 aa9.33□□□□□ -0.92
CHD3-209ENST00000473376 NPCDR1Q9BY65 106 aa9.33□□□□□ -0.92
CHD3-209ENST00000473376 GSN-AS1Q9NRJ2 163 aa9.33□□□□□ -0.92
CHD3-209ENST00000473376 FUT9Q9Y231 359 aa9.33□□□□□ -0.92
CHD3-209ENST00000473376 IGSF23A1L1A6 192 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 RBAKDNA6NC62 111 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 M0R3E3 92 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 GPX1P07203 203 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 H2AFB2P0C5Z0 115 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 FGF7P21781 194 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 RAB32Q13637 225 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 TMEM78Q5T7P6 136 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 LYPD1Q8N2G4 141 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 VGLL1Q99990 258 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 MRPL32Q9BYC8 188 aaKnown RBP9.32□□□□□ -0.92
CHD3-209ENST00000473376 SLC25A31Q9H0C2 315 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 PGPEP1Q9NXJ5 209 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 ZNF492Q9P255 531 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 PRO0255Q9UI72 69 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 TP53TG3Q9ULZ0 132 aa9.32□□□□□ -0.92
CHD3-209ENST00000473376 SIVA1O15304 175 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 S100A10P60903 97 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 CD300CQ08708 224 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 CDPF1Q6NVV7 123 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 MZT2BQ6NZ67 158 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 IQCF2Q8IXL9 164 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 ZFAND2AQ8N6M9 145 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 FAM167A-AS1Q96KT0 104 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 SEC22CQ9BRL7 303 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 KLF12Q9Y4X4 402 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 LENEPQ9Y5L5 61 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 ICOSQ9Y6W8 199 aa9.31□□□□□ -0.92
CHD3-209ENST00000473376 TRGV1A0A0A0MS02 117 aa9.3□□□□□ -0.92
CHD3-209ENST00000473376 FAM240BA0A1B0GVZ2 78 aa9.3□□□□□ -0.92
CHD3-209ENST00000473376 E5RGE8 158 aa9.3□□□□□ -0.92
CHD3-209ENST00000473376 J3KRW8 73 aa9.3□□□□□ -0.92
CHD3-209ENST00000473376 RGS13O14921 159 aa9.3□□□□□ -0.92
CHD3-209ENST00000473376 RNASE4P34096 147 aaKnown RBP9.3□□□□□ -0.92
CHD3-209ENST00000473376 CYCSP99999 105 aaKnown RBP9.3□□□□□ -0.92
CHD3-209ENST00000473376 ERCC8Q13216 396 aa9.3□□□□□ -0.92
CHD3-209ENST00000473376 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
CHD3-209ENST00000473376 NFE4Q86UQ8 179 aa9.3□□□□□ -0.92
CHD3-209ENST00000473376 SLC25A2Q9BXI2 301 aa9.3□□□□□ -0.92
CHD3-209ENST00000473376 NMES1Q9C002 83 aa9.3□□□□□ -0.92
CHD3-209ENST00000473376 OR51M1Q9H341 326 aa9.3□□□□□ -0.92
CHD3-209ENST00000473376 GPN1Q9HCN4 374 aaPredicted RBP9.3□□□□□ -0.92
CHD3-209ENST00000473376 HSPG2P98160 4391 aa9.29□□□□□ -0.92
CHD3-209ENST00000473376 IGHV1OR15-1A0A075B7D0 117 aa9.29□□□□□ -0.92
CHD3-209ENST00000473376 PAX4O43316 350 aa9.29□□□□□ -0.92
CHD3-209ENST00000473376 PYYP10082 97 aa9.29□□□□□ -0.92
CHD3-209ENST00000473376 PRB4P10163 310 aaPredicted RBP9.29□□□□□ -0.92
CHD3-209ENST00000473376 ZNF138P52744 262 aa9.29□□□□□ -0.92
CHD3-209ENST00000473376 BTN1A1Q13410 526 aa9.29□□□□□ -0.92
CHD3-209ENST00000473376 ICAM4Q14773 271 aa9.29□□□□□ -0.92
CHD3-209ENST00000473376 MRPL23Q16540 153 aaKnown RBP9.29□□□□□ -0.92
CHD3-209ENST00000473376 EXOC3-AS1Q8N2X6 119 aa9.29□□□□□ -0.92
CHD3-209ENST00000473376 ARL6IP6Q8N6S5 226 aa9.29□□□□□ -0.92
CHD3-209ENST00000473376 TMED6Q8WW62 240 aa9.29□□□□□ -0.92
CHD3-209ENST00000473376 HHLA3Q9XRX5 114 aa9.29□□□□□ -0.92
CHD3-209ENST00000473376 TRAV9-2A0A087WT02 112 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 EREGO14944 169 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 CSN1S1P47710 185 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 CRYBA4P53673 196 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 LINC00315P59091 139 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 ASAH1Q13510 395 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 ZNF266Q14584 549 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 OR5C1Q8NGR4 320 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 BLNKQ8WV28 456 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 RASL10AQ92737 203 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 BOLA1Q9Y3E2 137 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 ABCA13Q86UQ4 5058 aa9.28□□□□□ -0.92
CHD3-209ENST00000473376 C17orf112F2Z3M2 114 aa9.27□□□□□ -0.93
CHD3-209ENST00000473376 KRTAP10-2P60368 255 aa9.27□□□□□ -0.93
CHD3-209ENST00000473376 NHLH2Q02577 135 aa9.27□□□□□ -0.93
CHD3-209ENST00000473376 ZNF415Q09FC8 603 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms