RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 LYL1P12980 280 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 PRR31Q5SQ13 230 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 PNRC2Q9NPJ4 139 aaKnown RBP6.82□□□□□ -1.32
CD47-204ENST00000471694 PLXNA3P51805 1871 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 ANK1P16157 1881 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 M0R2N4 97 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 RNASE2P10153 161 aaKnown RBP6.82□□□□□ -1.32
CD47-204ENST00000471694 HLA-DRB4P13762 266 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 HLA-DRB4X5D2U9 266 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 C1orf194Q5T5A4 169 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 TSKUQ8WUA8 353 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 CLDN16Q9Y5I7 305 aa6.82□□□□□ -1.32
CD47-204ENST00000471694 TP53BP1Q12888 1972 aaPredicted RBP6.82□□□□□ -1.32
CD47-204ENST00000471694 TRAV8-2A0A0B4J237 113 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 MLANAQ16655 118 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 NHLRC3Q5JS37 347 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 NHP2Q9NX24 153 aaKnown RBP6.81□□□□□ -1.32
CD47-204ENST00000471694 PLXND1Q9Y4D7 1925 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 FANCMQ8IYD8 2048 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 Q6ZR03 302 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 C5orf24Q7Z6I8 188 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 YPEL3P61236 119 aaPredicted RBP6.81□□□□□ -1.32
CD47-204ENST00000471694 BLCAPP62952 87 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 C14orf177Q52M58 125 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 MYLKQ15746 1914 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 IGLV10-54A0A075B6I4 117 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 A8MXK9 166 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 SRSF2Q01130 221 aaKnown RBP6.81□□□□□ -1.32
CD47-204ENST00000471694 PTPRFP10586 1907 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 SMKR1H3BMG3 65 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 IGHV4-31P0DP07 118 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 LOXL1Q08397 574 aaPredicted RBP6.81□□□□□ -1.32
CD47-204ENST00000471694 TRAV8-4A0A0B4J246 113 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 IGLV1-44P01699 117 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 ADMP35318 185 aa6.81□□□□□ -1.32
CD47-204ENST00000471694 UBE2D1P51668 147 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 MRPL53Q96EL3 112 aaKnown RBP6.8□□□□□ -1.32
CD47-204ENST00000471694 MRPL36Q9P0J6 103 aaKnown RBP6.8□□□□□ -1.32
CD47-204ENST00000471694 FBLN5Q9UBX5 448 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 TRAV8-1A0A0A6YYK1 113 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 H2BFSP57053 126 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 IFI27L1Q96BM0 104 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 OSTCQ9NRP0 149 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 IGHV4-4A0A075B6R2 117 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 hADV29S1A0JD25 119 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 C17orf58Q2M2W7 97 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 ATP6V0E2Q8NHE4 81 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 FAM110AQ9BQ89 295 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 KLHDC3Q9BQ90 382 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 EP300Q09472 2414 aaPredicted RBP6.8□□□□□ -1.32
CD47-204ENST00000471694 MEGF9Q9H1U4 602 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 IFT22Q9H7X7 185 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 SMPXQ9UHP9 88 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 WDR83OSQ9Y284 106 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 GREB1LQ9C091 1923 aaPredicted RBP6.8□□□□□ -1.32
CD47-204ENST00000471694 C14orf144Q96I85 54 aa6.8□□□□□ -1.32
CD47-204ENST00000471694 TRAV9-1A0A075B6T8 112 aa6.79□□□□□ -1.32
CD47-204ENST00000471694 IGKV1D-8A0A087WSZ0 117 aa6.79□□□□□ -1.32
CD47-204ENST00000471694 PDE6HQ13956 83 aa6.79□□□□□ -1.32
CD47-204ENST00000471694 DEFB125Q8N687 156 aa6.79□□□□□ -1.32
CD47-204ENST00000471694 C19orf84I3L1E1 186 aa6.79□□□□□ -1.32
CD47-204ENST00000471694 NIT1Q86X76 327 aa6.79□□□□□ -1.32
CD47-204ENST00000471694 TP53TG1Q9Y2A0 90 aa6.79□□□□□ -1.32
CD47-204ENST00000471694 IFITM2Q01629 132 aa6.79□□□□□ -1.32
CD47-204ENST00000471694 NMSQ5H8A3 153 aa6.79□□□□□ -1.32
CD47-204ENST00000471694 CFHR4Q92496 578 aa6.79□□□□□ -1.32
CD47-204ENST00000471694 PROK2Q9HC23 129 aa6.79□□□□□ -1.32
CD47-204ENST00000471694 IGFL2Q6UWQ7 119 aa6.78□□□□□ -1.32
CD47-204ENST00000471694 TPSG1Q9NRR2 321 aa6.78□□□□□ -1.32
CD47-204ENST00000471694 ADAMTS9Q9P2N4 1935 aa6.78□□□□□ -1.32
CD47-204ENST00000471694 CHD3Q12873 2000 aaKnown RBP6.78□□□□□ -1.32
CD47-204ENST00000471694 ESDP10768 282 aa6.78□□□□□ -1.32
CD47-204ENST00000471694 DIAPH2-AS1Q14236 149 aa6.78□□□□□ -1.32
CD47-204ENST00000471694 LAIR2Q6ISS4 152 aa6.78□□□□□ -1.32
CD47-204ENST00000471694 OCC1Q8TAD7 63 aa6.78□□□□□ -1.32
CD47-204ENST00000471694 C7orf33Q8WU49 177 aa6.78□□□□□ -1.32
CD47-204ENST00000471694 PYGO2Q9BRQ0 406 aa6.78□□□□□ -1.32
CD47-204ENST00000471694 F6UB75 175 aa6.77□□□□□ -1.32
CD47-204ENST00000471694 NTF4P34130 210 aa6.77□□□□□ -1.32
CD47-204ENST00000471694 HHLA3Q9XRX5 114 aa6.77□□□□□ -1.32
CD47-204ENST00000471694 IGLV2-18A0A075B6J9 118 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 PRSS57Q6UWY2 283 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 AMTNQ6UX39 209 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 SPCS1Q9Y6A9 102 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 VWA8A3KMH1 1905 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 LINC00518Q8N0U6 118 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 SDK2Q58EX2 2172 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 ID3Q02535 119 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 LINC00311Q8N616 119 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 TMEM75Q8N9X5 138 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 K7EQD1 137 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 MPZP25189 248 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 ACACAQ13085 2346 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 C15orf62A8K5M9 175 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 RNASE13Q5GAN3 156 aaKnown RBP6.77□□□□□ -1.33
CD47-204ENST00000471694 CHCHD1Q96BP2 118 aaKnown RBP6.77□□□□□ -1.33
CD47-204ENST00000471694 AJUBAQ96IF1 538 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 VSIRQ9H7M9 311 aa6.77□□□□□ -1.33
CD47-204ENST00000471694 TRAV8-3A0A0A6YYJ7 113 aa6.76□□□□□ -1.33
CD47-204ENST00000471694 UBE2CO00762 179 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms