RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 FAM107AO95990 144 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 TRACP01848 142 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 FOXA3P55318 350 aaPredicted RBP0.4□□□□□ -2.35
COPS3-206ENST00000471414 NDUFA6P56556 154 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 FXYD4P59646 89 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 CASC2Q6XLA1 102 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 OR5AK2Q8NH90 309 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 LIMD2Q9BT23 127 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 CENPHQ9H3R5 247 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 SMPXQ9UHP9 88 aa0.4□□□□□ -2.35
COPS3-206ENST00000471414 BOKQ9UMX3 212 aaPredicted RBP0.4□□□□□ -2.35
COPS3-206ENST00000471414 FER1L6Q2WGJ9 1857 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 DLC1Q96QB1 1528 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 TRBV30A0A0K0K1B3 111 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 A0A1B0GV72 72 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 ZNF727A8MUV8 499 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 TPT1P13693 172 aaKnown RBP0.39□□□□□ -2.35
COPS3-206ENST00000471414 PDE6GP18545 87 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 MAXP61244 160 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 SPINK9Q5DT21 86 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 SPATA8Q6RVD6 105 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 LINC00305Q7Z4B0 112 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 GRPEL2Q8TAA5 225 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 THEM6Q8WUY1 208 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 CLEC2BQ92478 149 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 PRELID3AQ96N28 172 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 C10orf95Q9H7T3 257 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 NIT2Q9NQR4 276 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 MED31Q9Y3C7 131 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 ANK1P16157 1881 aa0.39□□□□□ -2.35
COPS3-206ENST00000471414 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.38□□□□□ -2.35
COPS3-206ENST00000471414 CTTNBP2Q8WZ74 1663 aa0.38□□□□□ -2.35
COPS3-206ENST00000471414 TRAV13-1A0A0B4J241 112 aa0.38□□□□□ -2.35
COPS3-206ENST00000471414 TRBV27A0A0K0K1C4 114 aa0.38□□□□□ -2.35
COPS3-206ENST00000471414 C3orf85A0A1B0GTC6 90 aa0.38□□□□□ -2.35
COPS3-206ENST00000471414 NUPR2A6NF83 97 aa0.38□□□□□ -2.35
COPS3-206ENST00000471414 A6NN06 94 aa0.38□□□□□ -2.35
COPS3-206ENST00000471414 SAA1P0DJI8 122 aaPredicted RBP0.38□□□□□ -2.35
COPS3-206ENST00000471414 POLR2HP52434 150 aaKnown RBP0.38□□□□□ -2.35
COPS3-206ENST00000471414 RPL37AP61513 92 aaKnown RBP0.38□□□□□ -2.35
COPS3-206ENST00000471414 TFAMQ00059 246 aaKnown RBP0.38□□□□□ -2.35
COPS3-206ENST00000471414 NEDD8Q15843 81 aa0.38□□□□□ -2.35
COPS3-206ENST00000471414 HRCT1Q6UXD1 115 aa0.38□□□□□ -2.35
COPS3-206ENST00000471414 Q6ZQY7 126 aa0.38□□□□□ -2.35
COPS3-206ENST00000471414 ATOH7Q8N100 152 aa0.38□□□□□ -2.35
COPS3-206ENST00000471414 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.38□□□□□ -2.35
COPS3-206ENST00000471414 RMND5BQ96G75 393 aaPredicted RBP0.38□□□□□ -2.35
COPS3-206ENST00000471414 LXNQ9BS40 222 aa0.38□□□□□ -2.35
COPS3-206ENST00000471414 A0A0D9SG42 100 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 TRBV7-6A0A0J9YX20 115 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 IFNA21P01568 189 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 IGHV3-30P01768 117 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 IGHV3-30-5P0DP03 117 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 SRP9P49458 86 aaKnown RBP0.37□□□□□ -2.35
COPS3-206ENST00000471414 TOMM20LQ6UXN7 152 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 IZUMO2Q6UXV1 221 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 C10orf111Q8N326 155 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 TEX29Q8N6K0 151 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 MORN4Q8NDC4 146 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 AP1S3Q96PC3 154 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 CIB3Q96Q77 187 aaPredicted RBP0.37□□□□□ -2.35
COPS3-206ENST00000471414 LPAR5Q9H1C0 372 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 BCORL1Q5H9F3 1711 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 FAM135BQ49AJ0 1406 aa0.37□□□□□ -2.35
COPS3-206ENST00000471414 MUC4Q99102 2169 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 A2MP01023 1474 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 LOC107984640A0A0U1RRK4 108 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 LOC107986453A0A1B0GWG9 222 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 H3BMG7 143 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 PGRMC1O00264 195 aaKnown RBP0.36□□□□□ -2.35
COPS3-206ENST00000471414 CCL4P13236 92 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 RPL7P18124 248 aaKnown RBP0.36□□□□□ -2.35
COPS3-206ENST00000471414 CRYGSP22914 178 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 SPINT3P49223 89 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 Q86TA4 180 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 C5orf17Q8NAS9 161 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 OR9Q1Q8NGQ5 310 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 CCL19Q99731 98 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 NABP2Q9BQ15 211 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 DDA1Q9BW61 102 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 FKBP11Q9NYL4 201 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 TRAPPC2LQ9UL33 140 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 FGD6Q6ZV73 1430 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 MYH1P12882 1939 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 ATG2AQ2TAZ0 1938 aa0.36□□□□□ -2.35
COPS3-206ENST00000471414 SPTBP11277 2137 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 TRPM7Q96QT4 1865 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.35□□□□□ -2.35
COPS3-206ENST00000471414 LOC107984156A0A0G2JMH3 177 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 ARL5CA6NH57 179 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 BBIP1A8MTZ0 92 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 SULT1C4O75897 302 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 ZNF137PP52743 207 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 FXYD6P3P58550 94 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 CCSMST1Q4G0I0 132 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 TMEM128Q5BJH2 165 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 SAMD13Q5VXD3 122 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 Q6ZS92 163 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 ARL17AQ8IVW1 177 aa0.35□□□□□ -2.35
COPS3-206ENST00000471414 TCTEX1D1Q8N7M0 179 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms