RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 CRYGCP07315 174 aa7.49□□□□□ -1.21
NHLRC3-203ENST00000470258 SRSF9Q13242 221 aaKnown RBP eCLIP7.49□□□□□ -1.21
NHLRC3-203ENST00000470258 PLGLAQ15195 96 aa7.49□□□□□ -1.21
NHLRC3-203ENST00000470258 LPAL2Q16609 132 aa7.49□□□□□ -1.21
NHLRC3-203ENST00000470258 C9orf106Q8NAJ2 232 aa7.49□□□□□ -1.21
NHLRC3-203ENST00000470258 KIR2DL4Q99706 377 aa7.49□□□□□ -1.21
NHLRC3-203ENST00000470258 ZNF71Q9NQZ8 489 aaPredicted RBP7.49□□□□□ -1.21
NHLRC3-203ENST00000470258 CACNA1BQ00975 2339 aa7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 ZFAND6Q6FIF0 208 aa7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 TEX29Q8N6K0 151 aa7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 ZMAT4Q9H898 229 aa7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 TRBV20-1A0A075B6N2 111 aa7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 INS-IGF2F8WCM5 200 aa7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 HOXB4P17483 251 aaPredicted RBP7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 GAGE5Q13069 117 aa7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 GAGE6Q13070 117 aa7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 CFAP126Q5VTH2 177 aa7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 NXT2Q9NPJ8 142 aaKnown RBP7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 TMEM14CQ9P0S9 112 aa7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 PROCRQ9UNN8 238 aa7.48□□□□□ -1.21
NHLRC3-203ENST00000470258 TRAV26-2A0A0B4J265 109 aa7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 NBL1P41271 181 aa7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 SRSF1Q07955 248 aaKnown RBP eCLIP7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 MORN3Q6PF18 240 aaPredicted RBP7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 SHISA2Q6UWI4 295 aa7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 TM4SF5O14894 197 aa7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 HLA-DRB4P13762 266 aa7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 PSMG4Q5JS54 123 aa7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 PIFOQ8TCI5 191 aa7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 HLA-DRB4X5D2U9 266 aa7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 RAI1Q7Z5J4 1906 aaPredicted RBP7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 SHISA9B4DS77 424 aa7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 ZNF80P51504 273 aaPredicted RBP7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 SHANK2-AS3Q9BTD1 123 aa7.47□□□□□ -1.21
NHLRC3-203ENST00000470258 IGHV3OR16-8A0A075B7F1 116 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 IGKV1-17P01599 117 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 SCGB1C2P0DMR2 95 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 PRTN3P24158 256 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 HERV-K104P63124 156 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 TAL2Q16559 108 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 TMEM200BQ69YZ2 307 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 SMIM20Q8N5G0 67 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 MDS2Q8NDY4 140 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 PPDPFLQ8WWR9 84 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 RNF185Q96GF1 192 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 VKORC1Q9BQB6 163 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 FBXL15Q9H469 300 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 MALRD1Q5VYJ5 2156 aa7.46□□□□□ -1.21
NHLRC3-203ENST00000470258 SRSF6Q13247 344 aaKnown RBP7.46□□□□□ -1.22
NHLRC3-203ENST00000470258 RNF125Q96EQ8 232 aa7.46□□□□□ -1.22
NHLRC3-203ENST00000470258 MUC6Q6W4X9 2439 aa7.46□□□□□ -1.22
NHLRC3-203ENST00000470258 PCNX1Q96RV3 2341 aa7.46□□□□□ -1.22
NHLRC3-203ENST00000470258 DMXL2Q8TDJ6 3036 aa7.46□□□□□ -1.22
NHLRC3-203ENST00000470258 TRBV7-3A0A075B6L6 115 aa7.46□□□□□ -1.22
NHLRC3-203ENST00000470258 MYMXA0A1B0GTQ4 84 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 IGLV1-44P01699 117 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 IGHV1-46P01743 117 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 HLA-DMBP28068 263 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 CARD19Q96LW7 228 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 RAXQ9Y2V3 346 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 ZZEF1O43149 2961 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 TRBV6-1A0A0K0K1D8 114 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 PMS2CLQ68D20 193 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 DTX2Q86UW9 622 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 PRR25Q96S07 402 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 CTSZQ9UBR2 303 aa7.45□□□□□ -1.22
NHLRC3-203ENST00000470258 CNOT1A5YKK6 2376 aaKnown RBP7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 VSTM5A8MXK1 200 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 H3BRN7 92 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 TMEM78Q5T7P6 136 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 SPENQ96T58 3664 aaKnown RBP7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 A0A087WX48 190 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 IGHV3-35A0A0C4DH35 117 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 LAGE3Q14657 143 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 C3orf36Q3SXR2 165 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 TEN1Q86WV5 123 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 ATP6V0E2Q8NHE4 81 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 GVINP1Q7Z2Y8 2422 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 A6NJY4 79 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 A8MWV9 139 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 TRGV3P03979 118 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 PLNP26678 52 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 Q8N8P6 123 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 CCL17Q92583 94 aa7.44□□□□□ -1.22
NHLRC3-203ENST00000470258 TRAV8-2A0A0B4J237 113 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 TRBV7-9A0A0J9YWB2 115 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 H7C2G1 150 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 K7EM74 188 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 IGHV3-23P01764 117 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 ZNF688P0C7X2 276 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 GLRXP35754 106 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 MRGPRG-AS1Q2M3A8 158 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 PPP1R27Q86WC6 154 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 ANKRD29Q8N6D5 301 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 ZNF491Q8N8L2 437 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 C1orf162Q8NEQ5 155 aaPredicted RBP7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 SIGLEC9Q9Y336 463 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 SLC25A15Q9Y619 301 aa7.43□□□□□ -1.22
NHLRC3-203ENST00000470258 CACNA1HO95180 2353 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms